Click here to switch to the map view.

The map label for this gene is 186477168

Identifier: 186477168

GI number: 186477168

Start: 2717644

End: 2719170

Strand: Direct

Name: 186477168

Synonym: Bphy_2417

Alternate gene names: NA

Gene position: 2717644-2719170 (Clockwise)

Preceding gene: 186477165

Following gene: 186477169

Centisome position: 78.11

GC content: 66.99

Gene sequence:

>1527_bases
ATGAAGCCTTCCGAAGGACGTCGGCCGGAACGCACGGCTGAACGCAAGCCGCCCAAGCTCGTCGCCCGTTTCGTGGCGAT
TTCGTGGCGCGATCTCGCCGTCTCGTTCGGCCCGATCCTCATCATCAGCGCGATCGCGATCTATATCGCCGTACGCCTGA
TCCAGCCTGCGCCGCCCGACACGCTGACGATGGCGGCCGGTCCCAAAGGCAGCACCTTCTGGGTTGCCGCGCAGAAGTAC
AAGGAGATCCTCGCGCGCAACCGCATCACGCTCAACGTGCTGGAGACGGAAGGCTCGCTCGACAACTACCGGCGTCTCGC
CGACCCGCACGCGAACGTGGATGTCGGCTTCGTGCAGGACGGCATCGCGCCGTCGAAACCGACGGACAATCTGATGTCGC
TCGGCAGCGTCGCCTATGTGCCCGTCGCGATCTTCTATCGCGGGCCGATGGTCACGCTGCTGTCGGAGTTCAAGGGCAAG
CGCATCGCGATCGGCGTCGAAGGCAGCGGCACGCGCGAGCTCGCGCTGCAGTTGCTGAAAGCGAACGGCATCACGCCCGA
CGGTACGACGAAACTGCTGCCGCTGTCGGGTGACGACGCCGCCCGCGCGCTGACGGAAGGCAAGATCGACGCGGCGATCC
TCACGGGCGACTCTGCGCAGCCGCCCGTGATGGGCAAGCTGTATCGCACGGCAGGCGTGCAGTTCTACGACTTCACCCAG
GCAAGCGCGTATGCGAAGCGCTTTCCGTATCTGACCCAGCTCGACATGCCGATGGGCTCGTTCGATCTCGGCAAGAACCT
GCCGTCGACCACGCTGCACATGATCGCGCCCACAGCCGAACTGGTCGCGCGCGATTCGCTGCATCCCGCGCTGTCCGATC
TGCTGATCGAAGCCGCGCGCGAGGTACACGGCAAGGCGACGGCGCTGCAGAAAGCAGGCGAATTCCCCGCACCGCTCGCG
CATGATTTCCCGATCAGCGACGACGCCGCGCGCTACTACAAGTCGGGCAAGGGCTTCCTCTACCGGATGCTGCCGTTCTG
GCTCGCAAGCCTGGCCGACCGGCTGCTGGTGGTGCTGGTGCCCGTCATCGTCGTGCTGATTCCGGGGCTGCGGCTCGTGC
CGTCGCTGTATGCGTGGCGTGTGAAATCGCGCATCTACCGCTGGTATGGCGCGCTGATCGCGATCGAGCGCGAGGCGCTC
AGCGACACCTCGGCGGCCGAGCGCGAGGCGCTGATCGTGAGGCTCGACAAGATCGAGGAATCGGTCAACGGGCTCAAGAT
GCCGCTCGCGTATGCGGATCAGTTCTACGTCCTGCGCGAGCATATCGGCTTTGTCCGGGCGCGCCTCGCGCGGGCGTCAG
ACACGGCCGCGACGCGCGAGGCCGGCGGCGCAGCGGGAGCGCCGGGTTCGCTGCACGCGCCGGATGCAGGCGCCGTCGGC
CGCGCGCAAGCGCGCGCGGCCATGCACGAGGGCCACGCGGCACCCGAAGGTCATGAAGACCGCCGCGAAGGCGGAGAGAG
CCGATAG

Upstream 100 bases:

>100_bases
TACGCGTTTGGGCCGCGGCAGGGCCGCCCGACGCGCCGCCGCGTCATCAAAGTCATGTACCATCGGCCCGAATTCATTCA
TCCGACCGCTCCGCATTCCC

Downstream 100 bases:

>100_bases
GGTCACCCGGCCGAACGCGCGAGCGTCATGACGCGCACGTCCGGCGCCCACGTAACAGGCGATGCCGCAACGGCATTTCG
TCAAATGATGCGCACGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TRAP-Type Transport System Periplasmic Component Protein; TRAP-Type Transport System Periplasmic Protein; Trap Transporter Solute Receptor Taxi Family Protein; TAXI Family TRAP Transporter Solute Receptor; Signal Peptide; TRAP-Type Transport System Periplasmic Component-Like; Trap Transporter Solute Receptor Taxi Family

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MKPSEGRRPERTAERKPPKLVARFVAISWRDLAVSFGPILIISAIAIYIAVRLIQPAPPDTLTMAAGPKGSTFWVAAQKY
KEILARNRITLNVLETEGSLDNYRRLADPHANVDVGFVQDGIAPSKPTDNLMSLGSVAYVPVAIFYRGPMVTLLSEFKGK
RIAIGVEGSGTRELALQLLKANGITPDGTTKLLPLSGDDAARALTEGKIDAAILTGDSAQPPVMGKLYRTAGVQFYDFTQ
ASAYAKRFPYLTQLDMPMGSFDLGKNLPSTTLHMIAPTAELVARDSLHPALSDLLIEAAREVHGKATALQKAGEFPAPLA
HDFPISDDAARYYKSGKGFLYRMLPFWLASLADRLLVVLVPVIVVLIPGLRLVPSLYAWRVKSRIYRWYGALIAIEREAL
SDTSAAEREALIVRLDKIEESVNGLKMPLAYADQFYVLREHIGFVRARLARASDTAATREAGGAAGAPGSLHAPDAGAVG
RAQARAAMHEGHAAPEGHEDRREGGESR

Sequences:

>Translated_508_residues
MKPSEGRRPERTAERKPPKLVARFVAISWRDLAVSFGPILIISAIAIYIAVRLIQPAPPDTLTMAAGPKGSTFWVAAQKY
KEILARNRITLNVLETEGSLDNYRRLADPHANVDVGFVQDGIAPSKPTDNLMSLGSVAYVPVAIFYRGPMVTLLSEFKGK
RIAIGVEGSGTRELALQLLKANGITPDGTTKLLPLSGDDAARALTEGKIDAAILTGDSAQPPVMGKLYRTAGVQFYDFTQ
ASAYAKRFPYLTQLDMPMGSFDLGKNLPSTTLHMIAPTAELVARDSLHPALSDLLIEAAREVHGKATALQKAGEFPAPLA
HDFPISDDAARYYKSGKGFLYRMLPFWLASLADRLLVVLVPVIVVLIPGLRLVPSLYAWRVKSRIYRWYGALIAIEREAL
SDTSAAEREALIVRLDKIEESVNGLKMPLAYADQFYVLREHIGFVRARLARASDTAATREAGGAAGAPGSLHAPDAGAVG
RAQARAAMHEGHAAPEGHEDRREGGESR
>Mature_508_residues
MKPSEGRRPERTAERKPPKLVARFVAISWRDLAVSFGPILIISAIAIYIAVRLIQPAPPDTLTMAAGPKGSTFWVAAQKY
KEILARNRITLNVLETEGSLDNYRRLADPHANVDVGFVQDGIAPSKPTDNLMSLGSVAYVPVAIFYRGPMVTLLSEFKGK
RIAIGVEGSGTRELALQLLKANGITPDGTTKLLPLSGDDAARALTEGKIDAAILTGDSAQPPVMGKLYRTAGVQFYDFTQ
ASAYAKRFPYLTQLDMPMGSFDLGKNLPSTTLHMIAPTAELVARDSLHPALSDLLIEAAREVHGKATALQKAGEFPAPLA
HDFPISDDAARYYKSGKGFLYRMLPFWLASLADRLLVVLVPVIVVLIPGLRLVPSLYAWRVKSRIYRWYGALIAIEREAL
SDTSAAEREALIVRLDKIEESVNGLKMPLAYADQFYVLREHIGFVRARLARASDTAATREAGGAAGAPGSLHAPDAGAVG
RAQARAAMHEGHAAPEGHEDRREGGESR

Specific function: Unknown

COG id: COG2358

COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55023; Mature: 55023

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSEGRRPERTAERKPPKLVARFVAISWRDLAVSFGPILIISAIAIYIAVRLIQPAPPD
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TLTMAAGPKGSTFWVAAQKYKEILARNRITLNVLETEGSLDNYRRLADPHANVDVGFVQD
CEEEECCCCCCEEEEEHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCCCEEEECCC
GIAPSKPTDNLMSLGSVAYVPVAIFYRGPMVTLLSEFKGKRIAIGVEGSGTRELALQLLK
CCCCCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
ANGITPDGTTKLLPLSGDDAARALTEGKIDAAILTGDSAQPPVMGKLYRTAGVQFYDFTQ
HCCCCCCCCEEEEEECCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCEEEECHH
ASAYAKRFPYLTQLDMPMGSFDLGKNLPSTTLHMIAPTAELVARDSLHPALSDLLIEAAR
HHHHHHHCCCCEEECCCCCCHHHCCCCCCCHHHHHCCHHHHHHHHCCCHHHHHHHHHHHH
EVHGKATALQKAGEFPAPLAHDFPISDDAARYYKSGKGFLYRMLPFWLASLADRLLVVLV
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
PVIVVLIPGLRLVPSLYAWRVKSRIYRWYGALIAIEREALSDTSAAEREALIVRLDKIEE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCHHHHHHHHHHHHHHHH
SVNGLKMPLAYADQFYVLREHIGFVRARLARASDTAATREAGGAAGAPGSLHAPDAGAVG
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
RAQARAAMHEGHAAPEGHEDRREGGESR
HHHHHHHHHCCCCCCCCCCHHHCCCCCC
>Mature Secondary Structure
MKPSEGRRPERTAERKPPKLVARFVAISWRDLAVSFGPILIISAIAIYIAVRLIQPAPPD
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TLTMAAGPKGSTFWVAAQKYKEILARNRITLNVLETEGSLDNYRRLADPHANVDVGFVQD
CEEEECCCCCCEEEEEHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCCCEEEECCC
GIAPSKPTDNLMSLGSVAYVPVAIFYRGPMVTLLSEFKGKRIAIGVEGSGTRELALQLLK
CCCCCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
ANGITPDGTTKLLPLSGDDAARALTEGKIDAAILTGDSAQPPVMGKLYRTAGVQFYDFTQ
HCCCCCCCCEEEEEECCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCEEEECHH
ASAYAKRFPYLTQLDMPMGSFDLGKNLPSTTLHMIAPTAELVARDSLHPALSDLLIEAAR
HHHHHHHCCCCEEECCCCCCHHHCCCCCCCHHHHHCCHHHHHHHHCCCHHHHHHHHHHHH
EVHGKATALQKAGEFPAPLAHDFPISDDAARYYKSGKGFLYRMLPFWLASLADRLLVVLV
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
PVIVVLIPGLRLVPSLYAWRVKSRIYRWYGALIAIEREALSDTSAAEREALIVRLDKIEE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCHHHHHHHHHHHHHHHH
SVNGLKMPLAYADQFYVLREHIGFVRARLARASDTAATREAGGAAGAPGSLHAPDAGAVG
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
RAQARAAMHEGHAAPEGHEDRREGGESR
HHHHHHHHHCCCCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA