| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yehV [C]
Identifier: 186477106
GI number: 186477106
Start: 2642850
End: 2643833
Strand: Direct
Name: yehV [C]
Synonym: Bphy_2355
Alternate gene names: 186477106
Gene position: 2642850-2643833 (Clockwise)
Preceding gene: 186477105
Following gene: 186477109
Centisome position: 75.96
GC content: 64.43
Gene sequence:
>984_bases ATGAACAACACAGTGGATGATCCAGAAGTCGCACCCCGCTATCGCATCGGCGCCGTCGCTCGCATGGCGAATCTCCCCGT GGGTACGCTGCGCATCTGGGAGCGCCGCTATGGCGTCGTTGCGCCGCCCACTACGCAGTCCGGCCATCGGCTCTACAGCG AAGCCGACGTGCGGCGCGTGGCAATGATCAAGGGGCTCGTCGATCGCGGCTATTCGATCGGCTCGATCGCGACGTTGCAG ACGGGCGAGCTCGAACGCCTCGCGTTCATGCATGTCGACAAGACGCCTGTGTCGCCGCTCACGGAAGGCCGGCCCGGTTT GCGTCTGCGCATCGTCGGCGCGGCGCTCGCCAGTACGATCCGCCAGCATCTGCATGCGATGCACGCCGAACTCGCCGGCG AGCCGAAGGTCTTCGAGAACATGACGGCCGCGTTCACAGAGCGCATGAACCAGCCTGCCGACGTGCTGATCATTCATTTG CCGTCGCTGCACACCGACGATGTCGAACGCGTGCTCGCGCTGAGTGCGTCGACGCATGCGGAAAACATCGTCGTCGTGTA CGCGTTCGCCGCTGCCAACACGATCGCCCTGCTGGAACGCGTCGGCGTGCGCACGATACGCGAGCCGCTCGATCAGCCAT CCGTCTCGCAGATGCTGGGGGACTTCCAGCGCAAGACGGCAACGACGGCTGCGCAGCCCGATATGCGCGAGCCCGCGCCG CAGCGGCACTACACCGACGAAGCATTGATGGCGATGGCGCATGCGTCGACCACCATCGCATGCGAATGTCCGAAGCATCT GGCGAACATCATCATGCAGCTGAGCGCCTTCGAGCAGTACAGCGTCAGCTGCGCTTCCCGCACGCCCGCCGATGCACTGC TGCATGTCTATCTGGCGAACATCTCGGGCCGCGCGCGGGCGATGTTCGAGCATGCGCTGCTCAGGCTCGAACGTGAAGAA AGGTGGGTGCTGGAAAACCGCTGA
Upstream 100 bases:
>100_bases GGCATGCACGGCCTTGCCGCATTGCTGAGTAAAAAGATCCGCATCAAAACATCGTCGCGCTTGTTAGACTCGAATCGGCT TCCCTAAGGGTTTTCGGTTC
Downstream 100 bases:
>100_bases GCGTGCACCACGCACAGGCGGCCCATCGGCTGCGCGAACAGGTGCGCAGCAGTGCGGCCTTTAGCGTTGTGCGCGCTTGT TCGCGTACATCGCGACGTCG
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator MerR Family Protein; MerR-Family Transcriptional Regulator; Transcriptional Regulator; MerR-Family Transcription Regulator Protein
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MNNTVDDPEVAPRYRIGAVARMANLPVGTLRIWERRYGVVAPPTTQSGHRLYSEADVRRVAMIKGLVDRGYSIGSIATLQ TGELERLAFMHVDKTPVSPLTEGRPGLRLRIVGAALASTIRQHLHAMHAELAGEPKVFENMTAAFTERMNQPADVLIIHL PSLHTDDVERVLALSASTHAENIVVVYAFAAANTIALLERVGVRTIREPLDQPSVSQMLGDFQRKTATTAAQPDMREPAP QRHYTDEALMAMAHASTTIACECPKHLANIIMQLSAFEQYSVSCASRTPADALLHVYLANISGRARAMFEHALLRLEREE RWVLENR
Sequences:
>Translated_327_residues MNNTVDDPEVAPRYRIGAVARMANLPVGTLRIWERRYGVVAPPTTQSGHRLYSEADVRRVAMIKGLVDRGYSIGSIATLQ TGELERLAFMHVDKTPVSPLTEGRPGLRLRIVGAALASTIRQHLHAMHAELAGEPKVFENMTAAFTERMNQPADVLIIHL PSLHTDDVERVLALSASTHAENIVVVYAFAAANTIALLERVGVRTIREPLDQPSVSQMLGDFQRKTATTAAQPDMREPAP QRHYTDEALMAMAHASTTIACECPKHLANIIMQLSAFEQYSVSCASRTPADALLHVYLANISGRARAMFEHALLRLEREE RWVLENR >Mature_327_residues MNNTVDDPEVAPRYRIGAVARMANLPVGTLRIWERRYGVVAPPTTQSGHRLYSEADVRRVAMIKGLVDRGYSIGSIATLQ TGELERLAFMHVDKTPVSPLTEGRPGLRLRIVGAALASTIRQHLHAMHAELAGEPKVFENMTAAFTERMNQPADVLIIHL PSLHTDDVERVLALSASTHAENIVVVYAFAAANTIALLERVGVRTIREPLDQPSVSQMLGDFQRKTATTAAQPDMREPAP QRHYTDEALMAMAHASTTIACECPKHLANIIMQLSAFEQYSVSCASRTPADALLHVYLANISGRARAMFEHALLRLEREE RWVLENR
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788448, Length=70, Percent_Identity=40, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36213; Mature: 36213
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNTVDDPEVAPRYRIGAVARMANLPVGTLRIWERRYGVVAPPTTQSGHRLYSEADVRRV CCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH AMIKGLVDRGYSIGSIATLQTGELERLAFMHVDKTPVSPLTEGRPGLRLRIVGAALASTI HHHHHHHHCCCCCCCEEEECCCCHHHHHEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHH RQHLHAMHAELAGEPKVFENMTAAFTERMNQPADVLIIHLPSLHTDDVERVLALSASTHA HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCC ENIVVVYAFAAANTIALLERVGVRTIREPLDQPSVSQMLGDFQRKTATTAAQPDMREPAP CCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC QRHYTDEALMAMAHASTTIACECPKHLANIIMQLSAFEQYSVSCASRTPADALLHVYLAN CCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC ISGRARAMFEHALLRLEREERWVLENR CCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNNTVDDPEVAPRYRIGAVARMANLPVGTLRIWERRYGVVAPPTTQSGHRLYSEADVRRV CCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH AMIKGLVDRGYSIGSIATLQTGELERLAFMHVDKTPVSPLTEGRPGLRLRIVGAALASTI HHHHHHHHCCCCCCCEEEECCCCHHHHHEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHH RQHLHAMHAELAGEPKVFENMTAAFTERMNQPADVLIIHLPSLHTDDVERVLALSASTHA HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCC ENIVVVYAFAAANTIALLERVGVRTIREPLDQPSVSQMLGDFQRKTATTAAQPDMREPAP CCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC QRHYTDEALMAMAHASTTIACECPKHLANIIMQLSAFEQYSVSCASRTPADALLHVYLAN CCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC ISGRARAMFEHALLRLEREERWVLENR CCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA