Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477096

Identifier: 186477096

GI number: 186477096

Start: 2632001

End: 2632747

Strand: Direct

Name: 186477096

Synonym: Bphy_2345

Alternate gene names: NA

Gene position: 2632001-2632747 (Clockwise)

Preceding gene: 186477095

Following gene: 186477098

Centisome position: 75.65

GC content: 66.0

Gene sequence:

>747_bases
ATGTCGACAACGGTTGAGGTCAGGTGCAACCTGGAGCGACCTTTGAACACACCCGAAACCCTCGCCGTCGACCGCCCCGC
GCGCCCCGACAGTACGGACAGGAGCGCCCGCAATGGCGCACCGCCCTCCGGCTCACGTCGAATCACCTTCATCCGCTGGC
TGCGCAAGGTGCACAGCTGGATCGGCCTGTGGGGCGCCGCGCTCGGTCTGCTGATGGGCACCAGCGGTTTCCTGCTGAAC
CATCGCGGCGGGCCGATGCGCGTATCGACGGGCGAACCGCAAGTCGAATCGCTTCAGGTGAAGCTGCCGCAGCCTGCGCC
CGACACGCCGCGCGATCTGGCGAAGTGGCTCAAGCAGGAACTCAAGGTCCAGGGCAAGCCGGGACGCATGCAGAAAGAGC
CGTCGCATCCCGTCGCGTGGGGCGATCGCACGGCCGTGCAGCCGGAACACTGGCAGGTTTCATTCGCGACGCCGAACGAA
AACACCCAGGCCGAATACTGGGTCGGCAATGACTACGTGAGCGTCAAGCGCAGCTCGAACACGTTGCTCGCGGCGCTGAC
GAATCTGCATAAGGGCGTGGGCCTGAGCGTCGGCTGGGTGCTGCTGATCGATACGTTTGCGGGCGGCATGATCCTGCTGT
CGCTCACGGGTGTGCTGCTGTGGACGCAGCTGAACAAGCGCCGCACCATCGGCGCGGTGCTGGTGCTCGGGTCCATCGTC
GCGGCGATCGTCGCCGGGATGGCCTGA

Upstream 100 bases:

>100_bases
CGGCCAGCCAGCCAACGCCATCGCATCCCCCGTCGATGGTCATTCCGTCTCGAAGCATCACGCGCGTCGCAAGCCTTCGC
GGCTCGACGCGTGCGCTGCC

Downstream 100 bases:

>100_bases
CGGTTCGCGCCCGGCAACACCAGACGCTGGAAAAACCGAAGAGCGATGCGCGATGGCGCGTCGCCCTTTTCGTTGTGCCG
CTTGCCGACGCTTATCGGCG

Product: PepSY-associated TM helix domain-containing protein

Products: NA

Alternate protein names: PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family Protein; PepSY-Associated TM Helix

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSTTVEVRCNLERPLNTPETLAVDRPARPDSTDRSARNGAPPSGSRRITFIRWLRKVHSWIGLWGAALGLLMGTSGFLLN
HRGGPMRVSTGEPQVESLQVKLPQPAPDTPRDLAKWLKQELKVQGKPGRMQKEPSHPVAWGDRTAVQPEHWQVSFATPNE
NTQAEYWVGNDYVSVKRSSNTLLAALTNLHKGVGLSVGWVLLIDTFAGGMILLSLTGVLLWTQLNKRRTIGAVLVLGSIV
AAIVAGMA

Sequences:

>Translated_248_residues
MSTTVEVRCNLERPLNTPETLAVDRPARPDSTDRSARNGAPPSGSRRITFIRWLRKVHSWIGLWGAALGLLMGTSGFLLN
HRGGPMRVSTGEPQVESLQVKLPQPAPDTPRDLAKWLKQELKVQGKPGRMQKEPSHPVAWGDRTAVQPEHWQVSFATPNE
NTQAEYWVGNDYVSVKRSSNTLLAALTNLHKGVGLSVGWVLLIDTFAGGMILLSLTGVLLWTQLNKRRTIGAVLVLGSIV
AAIVAGMA
>Mature_247_residues
STTVEVRCNLERPLNTPETLAVDRPARPDSTDRSARNGAPPSGSRRITFIRWLRKVHSWIGLWGAALGLLMGTSGFLLNH
RGGPMRVSTGEPQVESLQVKLPQPAPDTPRDLAKWLKQELKVQGKPGRMQKEPSHPVAWGDRTAVQPEHWQVSFATPNEN
TQAEYWVGNDYVSVKRSSNTLLAALTNLHKGVGLSVGWVLLIDTFAGGMILLSLTGVLLWTQLNKRRTIGAVLVLGSIVA
AIVAGMA

Specific function: Unknown

COG id: COG3295

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27079; Mature: 26947

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTVEVRCNLERPLNTPETLAVDRPARPDSTDRSARNGAPPSGSRRITFIRWLRKVHSW
CCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
IGLWGAALGLLMGTSGFLLNHRGGPMRVSTGEPQVESLQVKLPQPAPDTPRDLAKWLKQE
HHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
LKVQGKPGRMQKEPSHPVAWGDRTAVQPEHWQVSFATPNENTQAEYWVGNDYVSVKRSSN
HEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEECCC
TLLAALTNLHKGVGLSVGWVLLIDTFAGGMILLSLTGVLLWTQLNKRRTIGAVLVLGSIV
HHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AAIVAGMA
HHHHHCCC
>Mature Secondary Structure 
STTVEVRCNLERPLNTPETLAVDRPARPDSTDRSARNGAPPSGSRRITFIRWLRKVHSW
CCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
IGLWGAALGLLMGTSGFLLNHRGGPMRVSTGEPQVESLQVKLPQPAPDTPRDLAKWLKQE
HHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
LKVQGKPGRMQKEPSHPVAWGDRTAVQPEHWQVSFATPNENTQAEYWVGNDYVSVKRSSN
HEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEECCC
TLLAALTNLHKGVGLSVGWVLLIDTFAGGMILLSLTGVLLWTQLNKRRTIGAVLVLGSIV
HHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AAIVAGMA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA