| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is galM [H]
Identifier: 186477095
GI number: 186477095
Start: 2630663
End: 2631754
Strand: Direct
Name: galM [H]
Synonym: Bphy_2344
Alternate gene names: 186477095
Gene position: 2630663-2631754 (Clockwise)
Preceding gene: 186477094
Following gene: 186477096
Centisome position: 75.61
GC content: 67.03
Gene sequence:
>1092_bases ATGAATCTCGCCGACATGCACAGCACCGACACTTCTCTCTCCCCCAGCGTCCAGGTCGAACGCTGGGGCACGTTGCCCGG TCTTGGCGACGTCCGGCTGTTCACGCTGCGCAACGCGCACGGCATGCGCGCGGCCATTAGCGACCTGGGTGCCACGCTCG TTTCGTGGCATGCGCCCGACCGCGCCGGCCGCGTTGCCGATGTGCTGCTCGGCCACGACACGCCCGCCGACTATCTCGCG AGCCGATGGTTCTTCGGCTCGACCATCGGCCGCTGGGCGAACCGTATCGCGCAGGCGCGCTTCACGCTCGACGGCGTGAC CTATCAGCTCGACCGCAACGACGGCGACAATCTGCTGCACGGCGGCGCAAGCGGCTTTCACAAGGCGTTGTGGCAGGCGC GCGAAGTGGATGGCGCGCTCGTGCTGTCGCATGAATCGCCTGAAGGCGACGCGGGCTTTCCGGGTGCGGTGTCGGCTACC GTGCGCTATGCGCTCGACGACGACGGCGCACTCACGATCGACTACGACGCGACAGCCGATGCGCCCACACCCGTCAGCCT GACGAATCACGCGTACTTCAACCTGTCGGGCGACGCGCTCGCCGAGGCGCCGGACATTCGCGGCCATGTGATTTCGATCG ATGCCGACGCGTTCTTCGCGGTCGACGATACGATGATTCCCATCGAACGCAGGGAGGTGGCGGGAAGCGTGTTCGACTTT CGCACGGGCGCCCCCATCGGCGCACGCCTCGACTGGCCCGATGCGCAACTCGCGCGCGCGGGCGGCTTCGATCATTGCTA CGTGCTGCGCGACAGCGGCGCGGCCCTGCGTACGGCTGCCACGCTGTACGATCCCGCAACCGGACGCGAACTGACGGTGT CCACGGACGCGAGAGGCATGCAGTTCTACTCGGGCAACTTTCTCGCGGACGTCAACGGGCGCAGCGGCAGGACGTATGGC AAGCACGCAGCGTTGTGCCTTGAAACAGGCGCGTTTCCGAATCAGGTGAACATGCCCGATGCCGAAGACGTCGTGCTGCG CCCGGGCGCGCGCTATCGCCACACGACGGTCTACCGCCTCGGCGTGCGCTGA
Upstream 100 bases:
>100_bases CAGGAGCGACTGCACGCGGCGCAGTCCGTACCATCCGCGCCGTCCACACCCGATGCGCCCTCCGCCCAAATGCCTTAATC TGGTTCGATCCGCGACCGAC
Downstream 100 bases:
>100_bases ACTTGCATGCTCGTCACGTAATCTGTCGAAACATTGCCATTGTTGTAAATCGCGTCCGGCGATTGCGGCATTCATGACGC CGTGAAATCATAAACGGCTT
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MNLADMHSTDTSLSPSVQVERWGTLPGLGDVRLFTLRNAHGMRAAISDLGATLVSWHAPDRAGRVADVLLGHDTPADYLA SRWFFGSTIGRWANRIAQARFTLDGVTYQLDRNDGDNLLHGGASGFHKALWQAREVDGALVLSHESPEGDAGFPGAVSAT VRYALDDDGALTIDYDATADAPTPVSLTNHAYFNLSGDALAEAPDIRGHVISIDADAFFAVDDTMIPIERREVAGSVFDF RTGAPIGARLDWPDAQLARAGGFDHCYVLRDSGAALRTAATLYDPATGRELTVSTDARGMQFYSGNFLADVNGRSGRTYG KHAALCLETGAFPNQVNMPDAEDVVLRPGARYRHTTVYRLGVR
Sequences:
>Translated_363_residues MNLADMHSTDTSLSPSVQVERWGTLPGLGDVRLFTLRNAHGMRAAISDLGATLVSWHAPDRAGRVADVLLGHDTPADYLA SRWFFGSTIGRWANRIAQARFTLDGVTYQLDRNDGDNLLHGGASGFHKALWQAREVDGALVLSHESPEGDAGFPGAVSAT VRYALDDDGALTIDYDATADAPTPVSLTNHAYFNLSGDALAEAPDIRGHVISIDADAFFAVDDTMIPIERREVAGSVFDF RTGAPIGARLDWPDAQLARAGGFDHCYVLRDSGAALRTAATLYDPATGRELTVSTDARGMQFYSGNFLADVNGRSGRTYG KHAALCLETGAFPNQVNMPDAEDVVLRPGARYRHTTVYRLGVR >Mature_363_residues MNLADMHSTDTSLSPSVQVERWGTLPGLGDVRLFTLRNAHGMRAAISDLGATLVSWHAPDRAGRVADVLLGHDTPADYLA SRWFFGSTIGRWANRIAQARFTLDGVTYQLDRNDGDNLLHGGASGFHKALWQAREVDGALVLSHESPEGDAGFPGAVSAT VRYALDDDGALTIDYDATADAPTPVSLTNHAYFNLSGDALAEAPDIRGHVISIDADAFFAVDDTMIPIERREVAGSVFDF RTGAPIGARLDWPDAQLARAGGFDHCYVLRDSGAALRTAATLYDPATGRELTVSTDARGMQFYSGNFLADVNGRSGRTYG KHAALCLETGAFPNQVNMPDAEDVVLRPGARYRHTTVYRLGVR
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=350, Percent_Identity=41.1428571428571, Blast_Score=245, Evalue=4e-65, Organism=Escherichia coli, GI1786971, Length=333, Percent_Identity=40.8408408408408, Blast_Score=233, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17557428, Length=332, Percent_Identity=32.8313253012048, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI115533334, Length=332, Percent_Identity=32.8313253012048, Blast_Score=159, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6319493, Length=358, Percent_Identity=28.2122905027933, Blast_Score=109, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6322004, Length=364, Percent_Identity=26.9230769230769, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6324399, Length=357, Percent_Identity=25.2100840336134, Blast_Score=97, Evalue=5e-21, Organism=Drosophila melanogaster, GI24659048, Length=345, Percent_Identity=40.5797101449275, Blast_Score=232, Evalue=3e-61, Organism=Drosophila melanogaster, GI24583720, Length=340, Percent_Identity=37.3529411764706, Blast_Score=221, Evalue=7e-58, Organism=Drosophila melanogaster, GI24668278, Length=339, Percent_Identity=34.2182890855457, Blast_Score=211, Evalue=8e-55, Organism=Drosophila melanogaster, GI24668282, Length=343, Percent_Identity=33.8192419825073, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24641876, Length=348, Percent_Identity=29.5977011494253, Blast_Score=163, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR013458 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 39095; Mature: 39095
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00545 ALDOSE_1_EPIMERASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLADMHSTDTSLSPSVQVERWGTLPGLGDVRLFTLRNAHGMRAAISDLGATLVSWHAPD CCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEEECCCC RAGRVADVLLGHDTPADYLASRWFFGSTIGRWANRIAQARFTLDGVTYQLDRNDGDNLLH CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEECCCCCCEEE GGASGFHKALWQAREVDGALVLSHESPEGDAGFPGAVSATVRYALDDDGALTIDYDATAD CCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCC APTPVSLTNHAYFNLSGDALAEAPDIRGHVISIDADAFFAVDDTMIPIERREVAGSVFDF CCCCEEECCEEEEEECCCHHCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHCCCCEEC RTGAPIGARLDWPDAQLARAGGFDHCYVLRDSGAALRTAATLYDPATGRELTVSTDARGM CCCCCCCCEECCCCHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCCCEEEEECCCCCE QFYSGNFLADVNGRSGRTYGKHAALCLETGAFPNQVNMPDAEDVVLRPGARYRHTTVYRL EEECCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCEEEEEEEE GVR CCC >Mature Secondary Structure MNLADMHSTDTSLSPSVQVERWGTLPGLGDVRLFTLRNAHGMRAAISDLGATLVSWHAPD CCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEEECCCC RAGRVADVLLGHDTPADYLASRWFFGSTIGRWANRIAQARFTLDGVTYQLDRNDGDNLLH CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEECCCCCCEEE GGASGFHKALWQAREVDGALVLSHESPEGDAGFPGAVSATVRYALDDDGALTIDYDATAD CCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCC APTPVSLTNHAYFNLSGDALAEAPDIRGHVISIDADAFFAVDDTMIPIERREVAGSVFDF CCCCEEECCEEEEEECCCHHCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHCCCCEEC RTGAPIGARLDWPDAQLARAGGFDHCYVLRDSGAALRTAATLYDPATGRELTVSTDARGM CCCCCCCCEECCCCHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCCCEEEEECCCCCE QFYSGNFLADVNGRSGRTYGKHAALCLETGAFPNQVNMPDAEDVVLRPGARYRHTTVYRL EEECCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCEEEEEEEE GVR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7966338; 8905232; 9278503 [H]