| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is bla [H]
Identifier: 186476980
GI number: 186476980
Start: 2501663
End: 2502508
Strand: Reverse
Name: bla [H]
Synonym: Bphy_2229
Alternate gene names: 186476980
Gene position: 2502508-2501663 (Counterclockwise)
Preceding gene: 186476981
Following gene: 186476976
Centisome position: 71.93
GC content: 64.78
Gene sequence:
>846_bases ATGATCGGCGTACGTGCGCAGCCGGCTTCCTCCGTATCGATCAATCTTGCTGCGCGTGAGCGCTTCGAACAACTGGAGGC ATCGAGTGGCGGCCGGCTCGGCGTCGCGGCGCTCAGAACGGCTGACGGTTCCTATGTCGGCTACCGGGAGTCGGAACGCT TTCCGATGTGCAGTACTTTCAAGCTGCTCGCCGTCGCATTGATCCTGAAGCGCAGCATGGCCGAACGCGGCTTGCTCGAA GAGCGCATCCGCTACGGCGACGCTCAGGTCGTCGCTCATTCGCCCGTCACGAAGCGGCACGCAGGCGGCGAGGGAATGAC GGTAGGGGAGTTGAGTGCAGCGGCGCTCCAGCATAGCGACAACACCGCGGCCAATCTGTTGCTGACGTCGCTTGGCGGGC CGGAGGTGCTGAACCAGTTTGCGTTATCGATCGGCGACACCTGGTTCGACCTCGTTCGCAACGAACCCGAAGTGAACGCA TCGGTGCCCGGGGACATGCGTGACACCACGTCGCCGCGCGCGATGCTGCTCGATGTGCAGAAACTGCTGCTCGCAGACGA CGTGCTGGGTGCGCGCGAGCGCGAGCAGTTGAAGGCGTGGATGCTGGGCAATACGACGGGTGCCACGCGCATCCGCGCGG CCGTGCCTGCGGCCGGATGGTTGGTCGCGGACAACACGGGCAGTGGAGACTACGGCACGGCTAACGACGTCGCCGTGGTA TATCCGCCCTCGTCGGCGCCGTTGGTCGTCGCGATCTACTTCACGGGCGTGACGCCGAAGGAAACGCCGCCACAGGACGC AATCGTCGACGAGGCGGCGCGAATCGTATTCGACGCGCTGCGATGA
Upstream 100 bases:
>100_bases GCATTGCGATAATGCTTTCCCTTCGCTTTGCATTCAGTCTTCGCTCATGTCTTTTTCTTCTCTGCGTCGTTCACTGCTGA TTGCGCTTGCGGCTGGTCCC
Downstream 100 bases:
>100_bases ACGATGCAGATGCAGGAGCTAACGGTGTGAGCGGCATTCTTTTGCGAAGGCATAGCGTGGATGCCAGCGACGAAAACGCA AACCGACGGCAGCGAAATCA
Product: beta-lactamase
Products: NA
Alternate protein names: Beta-lactamase MEN-1; Cefotaximase 1 [H]
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MIGVRAQPASSVSINLAARERFEQLEASSGGRLGVAALRTADGSYVGYRESERFPMCSTFKLLAVALILKRSMAERGLLE ERIRYGDAQVVAHSPVTKRHAGGEGMTVGELSAAALQHSDNTAANLLLTSLGGPEVLNQFALSIGDTWFDLVRNEPEVNA SVPGDMRDTTSPRAMLLDVQKLLLADDVLGAREREQLKAWMLGNTTGATRIRAAVPAAGWLVADNTGSGDYGTANDVAVV YPPSSAPLVVAIYFTGVTPKETPPQDAIVDEAARIVFDALR
Sequences:
>Translated_281_residues MIGVRAQPASSVSINLAARERFEQLEASSGGRLGVAALRTADGSYVGYRESERFPMCSTFKLLAVALILKRSMAERGLLE ERIRYGDAQVVAHSPVTKRHAGGEGMTVGELSAAALQHSDNTAANLLLTSLGGPEVLNQFALSIGDTWFDLVRNEPEVNA SVPGDMRDTTSPRAMLLDVQKLLLADDVLGAREREQLKAWMLGNTTGATRIRAAVPAAGWLVADNTGSGDYGTANDVAVV YPPSSAPLVVAIYFTGVTPKETPPQDAIVDEAARIVFDALR >Mature_281_residues MIGVRAQPASSVSINLAARERFEQLEASSGGRLGVAALRTADGSYVGYRESERFPMCSTFKLLAVALILKRSMAERGLLE ERIRYGDAQVVAHSPVTKRHAGGEGMTVGELSAAALQHSDNTAANLLLTSLGGPEVLNQFALSIGDTWFDLVRNEPEVNA SVPGDMRDTTSPRAMLLDVQKLLLADDVLGAREREQLKAWMLGNTTGATRIRAAVPAAGWLVADNTGSGDYGTANDVAVV YPPSSAPLVVAIYFTGVTPKETPPQDAIVDEAARIVFDALR
Specific function: Broad spectrum beta-lactamase which confers resistance to penicillins, as well as first, second and third-generation cephalosporins [H]
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-A beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR000871 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 29922; Mature: 29922
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGVRAQPASSVSINLAARERFEQLEASSGGRLGVAALRTADGSYVGYRESERFPMCSTF CCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEEEECCCCEECCCCCCCCCCHHHH KLLAVALILKRSMAERGLLEERIRYGDAQVVAHSPVTKRHAGGEGMTVGELSAAALQHSD HHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCHHHCCCCCCCCHHHHHHHHHHCCC NTAANLLLTSLGGPEVLNQFALSIGDTWFDLVRNEPEVNASVPGDMRDTTSPRAMLLDVQ CHHHHEEEECCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH KLLLADDVLGAREREQLKAWMLGNTTGATRIRAAVPAAGWLVADNTGSGDYGTANDVAVV HHHHHHHHHCCHHHHHHHHHHCCCCCCCHHEEEECCCCCEEEECCCCCCCCCCCCCEEEE YPPSSAPLVVAIYFTGVTPKETPPQDAIVDEAARIVFDALR ECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MIGVRAQPASSVSINLAARERFEQLEASSGGRLGVAALRTADGSYVGYRESERFPMCSTF CCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEEEECCCCEECCCCCCCCCCHHHH KLLAVALILKRSMAERGLLEERIRYGDAQVVAHSPVTKRHAGGEGMTVGELSAAALQHSD HHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCHHHCCCCCCCCHHHHHHHHHHCCC NTAANLLLTSLGGPEVLNQFALSIGDTWFDLVRNEPEVNASVPGDMRDTTSPRAMLLDVQ CHHHHEEEECCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH KLLLADDVLGAREREQLKAWMLGNTTGATRIRAAVPAAGWLVADNTGSGDYGTANDVAVV HHHHHHHHHCCHHHHHHHHHHCCCCCCCHHEEEECCCCCEEEECCCCCCCCCCCCCEEEE YPPSSAPLVVAIYFTGVTPKETPPQDAIVDEAARIVFDALR ECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8834913; 1633193 [H]