| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is pepA [H]
Identifier: 186476976
GI number: 186476976
Start: 2497245
End: 2498756
Strand: Reverse
Name: pepA [H]
Synonym: Bphy_2225
Alternate gene names: 186476976
Gene position: 2498756-2497245 (Counterclockwise)
Preceding gene: 186476980
Following gene: 186476975
Centisome position: 71.82
GC content: 63.82
Gene sequence:
>1512_bases ATGGACTTTAGCATAAAAGCCTGTGATTGGAGCAAAGGCTCGACCAACGGGTTCCTTACCGGCAAATCGGATTGCATCGT GATCGGCGTCTTCGAGTCGCAGACGCTGTCGGGCGCGGCGCTGGAAATCGACGCTGCCACCAAGGGACTGCTCACGCGCA TCATCAAGGCGGGCGACATGGACGGGAAGACGGGGAGCACGGTGTTCCTGCATGAAGTGCAAGGCATCGGCGCATCGCGC GTGCTGCTCGTCGGTCTTGGCAAGCAGGATGCGTTCACACAGAAGGTCTACGGCGACGCCGTGCGCGCCGCGTGGCGCGC CATTCTCGGGACCAAGGTCGCACAGGTCACCTTCACGCTGGTGCAAGCGCCCGTCAAGGAGCGTTCGTCGGACTGGGCCG TGCGCGCTGCGATCCTCGCGCTGCGCGAGCTGACCTACAAGTTTACACAGATGAAGAGCAAGCCCGACACCAGCACGCGT GCGCTCAAGCGCATCGTGTTCAGTGTCGACGCCGCGGACGAAAAACTCGCGAAGGTCGCCGTCAAGCAGGGCGTCGCGCT CGCGAACGGAATGGATCTCACGAAAGATCTGGGCAATCTGCCGGGCAACGTCTGCACGCCCACCTATCTGGGCAACACCG CGAAGAAGCTCGCGAAGGACTGGAAGCTGAAGGTCGAGGTGCTTGGCCAGAAGCAGATCGAAGCGCTGAAGATGGGCTCG TTCCTGGCGGTCACGCAGGGTTCCGTCGAGCCGCCGCAGTTCATCGTCCTCCAGTATCAGGGCGGTGCCGCGAAGGCTGC GCCCGTCGTGCTGGTCGGCAAAGGCATCACGTTCGACACGGGCGGCATTTCGCTGAAACCCGGCGACAGCATGGACGAGA TGAAGTACGACATGTGCGGCGCGGGCTCGGTGCTCGGCACGCTGCGCGCGGTCGCCGAAATGGGCCTGAAGCTTAACGTG GTCGGCATTATTCCGACCTGCGAAAACATGCCGGCCGGCAACGCGACCAAACCGGGCGACATCGTCACCAGCATGAAAGG CCTGACGATCGAAGTGTTGAACACGGACGCGGAAGGGCGCCTGATCCTATGCGATGCGCTCACCTACGCGGAGCGCTTCA AGCCGGCCGCCGTGATCGACATCGCCACGCTGACGGGCGCCTGTATCATCGCGCTCGGCCACCACAACAGTGGCCTGTTC TCGAAGGACGACGCGCTCGCGGGCGAACTGCTCGACGCTTCGAAGGAAGCGTCCGACCCTGCATGGCGTCTGCCCCTCGA CGACGAATATCAGGATCAGCTCAAGTCGAATTTCGCGGACATCGCGAACATCGGCGGCCGTCCGGCGGGTAGCGTGACGG CGGCGTGCTTCCTGTCGCGCTTCACAGAAGCGTATCCGTGGGCCCACCTCGACATCGCGGGTACCGCGTGGAAGAGCGGC GCGGCAAAGGGCGCGACGGGCCGTCCCGTGCCGCTGCTCGCGCAGTTCCTGATCGACCGCGCCGCACAATGA
Upstream 100 bases:
>100_bases GGTTGGGGCCCCTCACGCCTTTCGTGCAGCCGCCGCGGGAAAAATAGCGGATAATTGCGGCTTTCATCCTAAGCCCAGAT TTCATCCGAGGACAAGCGCG
Downstream 100 bases:
>100_bases CGCGTCGCAGTTCGATCGTACGCCAGGCAGTAAACCGGGATCGCCGATGACCCGAATCGACTTTCATTCGAACGTCGGCG ATTCGTTGCTGTATGCATGC
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MDFSIKACDWSKGSTNGFLTGKSDCIVIGVFESQTLSGAALEIDAATKGLLTRIIKAGDMDGKTGSTVFLHEVQGIGASR VLLVGLGKQDAFTQKVYGDAVRAAWRAILGTKVAQVTFTLVQAPVKERSSDWAVRAAILALRELTYKFTQMKSKPDTSTR ALKRIVFSVDAADEKLAKVAVKQGVALANGMDLTKDLGNLPGNVCTPTYLGNTAKKLAKDWKLKVEVLGQKQIEALKMGS FLAVTQGSVEPPQFIVLQYQGGAAKAAPVVLVGKGITFDTGGISLKPGDSMDEMKYDMCGAGSVLGTLRAVAEMGLKLNV VGIIPTCENMPAGNATKPGDIVTSMKGLTIEVLNTDAEGRLILCDALTYAERFKPAAVIDIATLTGACIIALGHHNSGLF SKDDALAGELLDASKEASDPAWRLPLDDEYQDQLKSNFADIANIGGRPAGSVTAACFLSRFTEAYPWAHLDIAGTAWKSG AAKGATGRPVPLLAQFLIDRAAQ
Sequences:
>Translated_503_residues MDFSIKACDWSKGSTNGFLTGKSDCIVIGVFESQTLSGAALEIDAATKGLLTRIIKAGDMDGKTGSTVFLHEVQGIGASR VLLVGLGKQDAFTQKVYGDAVRAAWRAILGTKVAQVTFTLVQAPVKERSSDWAVRAAILALRELTYKFTQMKSKPDTSTR ALKRIVFSVDAADEKLAKVAVKQGVALANGMDLTKDLGNLPGNVCTPTYLGNTAKKLAKDWKLKVEVLGQKQIEALKMGS FLAVTQGSVEPPQFIVLQYQGGAAKAAPVVLVGKGITFDTGGISLKPGDSMDEMKYDMCGAGSVLGTLRAVAEMGLKLNV VGIIPTCENMPAGNATKPGDIVTSMKGLTIEVLNTDAEGRLILCDALTYAERFKPAAVIDIATLTGACIIALGHHNSGLF SKDDALAGELLDASKEASDPAWRLPLDDEYQDQLKSNFADIANIGGRPAGSVTAACFLSRFTEAYPWAHLDIAGTAWKSG AAKGATGRPVPLLAQFLIDRAAQ >Mature_503_residues MDFSIKACDWSKGSTNGFLTGKSDCIVIGVFESQTLSGAALEIDAATKGLLTRIIKAGDMDGKTGSTVFLHEVQGIGASR VLLVGLGKQDAFTQKVYGDAVRAAWRAILGTKVAQVTFTLVQAPVKERSSDWAVRAAILALRELTYKFTQMKSKPDTSTR ALKRIVFSVDAADEKLAKVAVKQGVALANGMDLTKDLGNLPGNVCTPTYLGNTAKKLAKDWKLKVEVLGQKQIEALKMGS FLAVTQGSVEPPQFIVLQYQGGAAKAAPVVLVGKGITFDTGGISLKPGDSMDEMKYDMCGAGSVLGTLRAVAEMGLKLNV VGIIPTCENMPAGNATKPGDIVTSMKGLTIEVLNTDAEGRLILCDALTYAERFKPAAVIDIATLTGACIIALGHHNSGLF SKDDALAGELLDASKEASDPAWRLPLDDEYQDQLKSNFADIANIGGRPAGSVTAACFLSRFTEAYPWAHLDIAGTAWKSG AAKGATGRPVPLLAQFLIDRAAQ
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=455, Percent_Identity=39.1208791208791, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI47155554, Length=372, Percent_Identity=31.7204301075269, Blast_Score=127, Evalue=3e-29, Organism=Escherichia coli, GI1790710, Length=505, Percent_Identity=49.9009900990099, Blast_Score=518, Evalue=1e-148, Organism=Escherichia coli, GI87082123, Length=320, Percent_Identity=42.8125, Blast_Score=204, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17556903, Length=330, Percent_Identity=31.5151515151515, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17565172, Length=249, Percent_Identity=29.3172690763052, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI21355725, Length=321, Percent_Identity=37.6947040498442, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI24661038, Length=321, Percent_Identity=37.3831775700935, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI20129969, Length=498, Percent_Identity=30.5220883534137, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI24662227, Length=329, Percent_Identity=35.5623100303951, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI161077148, Length=492, Percent_Identity=30.4878048780488, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI20130057, Length=492, Percent_Identity=30.4878048780488, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI21355645, Length=496, Percent_Identity=29.6370967741936, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI24662223, Length=496, Percent_Identity=29.6370967741936, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI20129963, Length=496, Percent_Identity=28.4274193548387, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI19922386, Length=520, Percent_Identity=28.0769230769231, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI21357381, Length=310, Percent_Identity=31.2903225806452, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI221379063, Length=310, Percent_Identity=31.2903225806452, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI221379062, Length=310, Percent_Identity=31.2903225806452, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24646701, Length=236, Percent_Identity=29.6610169491525, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24646703, Length=236, Percent_Identity=29.6610169491525, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI21358201, Length=236, Percent_Identity=29.6610169491525, Blast_Score=87, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 53089; Mature: 53089
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSIKACDWSKGSTNGFLTGKSDCIVIGVFESQTLSGAALEIDAATKGLLTRIIKAGDM CCCEEEECCCCCCCCCCEEECCCCEEEEEEECCCCCCCCEEEECHHHHHHHHHHHHHCCC DGKTGSTVFLHEVQGIGASRVLLVGLGKQDAFTQKVYGDAVRAAWRAILGTKVAQVTFTL CCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQAPVKERSSDWAVRAAILALRELTYKFTQMKSKPDTSTRALKRIVFSVDAADEKLAKVA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHH VKQGVALANGMDLTKDLGNLPGNVCTPTYLGNTAKKLAKDWKLKVEVLGQKQIEALKMGS HHHCCHHCCCCHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHEEEEEECCHHHHHHHHCCC FLAVTQGSVEPPQFIVLQYQGGAAKAAPVVLVGKGITFDTGGISLKPGDSMDEMKYDMCG EEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCEEECCCCEEECCCCCHHHHHHHHCC AGSVLGTLRAVAEMGLKLNVVGIIPTCENMPAGNATKPGDIVTSMKGLTIEVLNTDAEGR CHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCC LILCDALTYAERFKPAAVIDIATLTGACIIALGHHNSGLFSKDDALAGELLDASKEASDP EEEEEHHHHHHHCCCCEEEEHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCC AWRLPLDDEYQDQLKSNFADIANIGGRPAGSVTAACFLSRFTEAYPWAHLDIAGTAWKSG EEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCC AAKGATGRPVPLLAQFLIDRAAQ CCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MDFSIKACDWSKGSTNGFLTGKSDCIVIGVFESQTLSGAALEIDAATKGLLTRIIKAGDM CCCEEEECCCCCCCCCCEEECCCCEEEEEEECCCCCCCCEEEECHHHHHHHHHHHHHCCC DGKTGSTVFLHEVQGIGASRVLLVGLGKQDAFTQKVYGDAVRAAWRAILGTKVAQVTFTL CCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQAPVKERSSDWAVRAAILALRELTYKFTQMKSKPDTSTRALKRIVFSVDAADEKLAKVA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHH VKQGVALANGMDLTKDLGNLPGNVCTPTYLGNTAKKLAKDWKLKVEVLGQKQIEALKMGS HHHCCHHCCCCHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHEEEEEECCHHHHHHHHCCC FLAVTQGSVEPPQFIVLQYQGGAAKAAPVVLVGKGITFDTGGISLKPGDSMDEMKYDMCG EEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCEEECCCCEEECCCCCHHHHHHHHCC AGSVLGTLRAVAEMGLKLNVVGIIPTCENMPAGNATKPGDIVTSMKGLTIEVLNTDAEGR CHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCC LILCDALTYAERFKPAAVIDIATLTGACIIALGHHNSGLFSKDDALAGELLDASKEASDP EEEEEHHHHHHHCCCCEEEEHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCC AWRLPLDDEYQDQLKSNFADIANIGGRPAGSVTAACFLSRFTEAYPWAHLDIAGTAWKSG EEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCC AAKGATGRPVPLLAQFLIDRAAQ CCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA