Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186476969

Identifier: 186476969

GI number: 186476969

Start: 2490816

End: 2491538

Strand: Direct

Name: 186476969

Synonym: Bphy_2218

Alternate gene names: NA

Gene position: 2490816-2491538 (Clockwise)

Preceding gene: 186476968

Following gene: 186476972

Centisome position: 71.59

GC content: 63.49

Gene sequence:

>723_bases
ATGACGACAAAATCTGCGCTCGCGTGGGCGCTCGTAGCGCCGCTCGCATTTGCATTCACGGCTACCGCGGCCAATGCGCA
AACCGTCGTGCAACAGTTTCAGCCGGCCGGCGTGCTGTCGCTGAACGCGCAGGCAAGCGCCGAAGTGCCGCAGGACGTCG
TCGATATCACGCTGTTCTATGAACAGGAAGCGAGCGATCCATCCTCGTTGACGGGCGCGCTGAACCAGCATGCCGACCAG
GCGTTGCAAAAGGCCAAGGGTGTGAGCGGCGTGACGGCGCGCACGGGATCGTTCTCGATCTATCCGTCGACGGATCGCGA
TGGGCGGATTTCCGCGTGGCGTGGCCGCACAGAGATCGTGCTGGAGTCGCACGACTTCGCAGCGGCCTCGAAGCTCGCGG
GACAGATCGCTTCGATCATGCAAGTCGGCAATGTGCAGTTCTCTTTATCGCCGGAGGCACAGCGCGCTGCCGAGCAGAAG
CTGACAGGTCAGGCAATCGCATCGTTCAAGCAGCAGGCTACAGCGTCGGCCCAGGCGTTCGGCTACAACGGCTACACGAT
CCGCGAAGTGAGCGTCGGACATAGTGGCGGCGTGCCGCCGCGGCCGGTGATGATGATGAGCATGCGGTCGGATGTGAGCG
CAAAGGCCGCTGCCCCCGTGCCCGTCGAGGGCGGGACGGCGACGGTCACTGTCAATGTGTCGGGGTCCGTGCAAATGAAG
TGA

Upstream 100 bases:

>100_bases
ACCGCCTCGCAAGCGTCATGCCACGCGCGCCGCGCGAGCCAGGGCGACGGCCTCGCGCCAATGCATGTACGCACAACCTG
CTCAACGAAGGAGTCGAACA

Downstream 100 bases:

>100_bases
GGCTGCTGTCTTGTGGCTTTTTCTGGGTTTTTGCTTTCGCTGGATGCCAGCGAAAGCAAAAACCAGAATGGCGACTGGCT
CGCAGACAAAAACCTCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTTKSALAWALVAPLAFAFTATAANAQTVVQQFQPAGVLSLNAQASAEVPQDVVDITLFYEQEASDPSSLTGALNQHADQ
ALQKAKGVSGVTARTGSFSIYPSTDRDGRISAWRGRTEIVLESHDFAAASKLAGQIASIMQVGNVQFSLSPEAQRAAEQK
LTGQAIASFKQQATASAQAFGYNGYTIREVSVGHSGGVPPRPVMMMSMRSDVSAKAAAPVPVEGGTATVTVNVSGSVQMK

Sequences:

>Translated_240_residues
MTTKSALAWALVAPLAFAFTATAANAQTVVQQFQPAGVLSLNAQASAEVPQDVVDITLFYEQEASDPSSLTGALNQHADQ
ALQKAKGVSGVTARTGSFSIYPSTDRDGRISAWRGRTEIVLESHDFAAASKLAGQIASIMQVGNVQFSLSPEAQRAAEQK
LTGQAIASFKQQATASAQAFGYNGYTIREVSVGHSGGVPPRPVMMMSMRSDVSAKAAAPVPVEGGTATVTVNVSGSVQMK
>Mature_239_residues
TTKSALAWALVAPLAFAFTATAANAQTVVQQFQPAGVLSLNAQASAEVPQDVVDITLFYEQEASDPSSLTGALNQHADQA
LQKAKGVSGVTARTGSFSIYPSTDRDGRISAWRGRTEIVLESHDFAAASKLAGQIASIMQVGNVQFSLSPEAQRAAEQKL
TGQAIASFKQQATASAQAFGYNGYTIREVSVGHSGGVPPRPVMMMSMRSDVSAKAAAPVPVEGGTATVTVNVSGSVQMK

Specific function: Unknown

COG id: COG3471

COG function: function code S; Predicted periplasmic/secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24949; Mature: 24818

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKSALAWALVAPLAFAFTATAANAQTVVQQFQPAGVLSLNAQASAEVPQDVVDITLFY
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCCCCCCCCHHHEEEEEEE
EQEASDPSSLTGALNQHADQALQKAKGVSGVTARTGSFSIYPSTDRDGRISAWRGRTEIV
ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCCCEEEECCCEEEE
LESHDFAAASKLAGQIASIMQVGNVQFSLSPEAQRAAEQKLTGQAIASFKQQATASAQAF
EECCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GYNGYTIREVSVGHSGGVPPRPVMMMSMRSDVSAKAAAPVPVEGGTATVTVNVSGSVQMK
CCCCEEEEEEECCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCEEEEEEEECCEEEEC
>Mature Secondary Structure 
TTKSALAWALVAPLAFAFTATAANAQTVVQQFQPAGVLSLNAQASAEVPQDVVDITLFY
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCCCCCCCCHHHEEEEEEE
EQEASDPSSLTGALNQHADQALQKAKGVSGVTARTGSFSIYPSTDRDGRISAWRGRTEIV
ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCCCEEEECCCEEEE
LESHDFAAASKLAGQIASIMQVGNVQFSLSPEAQRAAEQKLTGQAIASFKQQATASAQAF
EECCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GYNGYTIREVSVGHSGGVPPRPVMMMSMRSDVSAKAAAPVPVEGGTATVTVNVSGSVQMK
CCCCEEEEEEECCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCEEEEEEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA