| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476968
Identifier: 186476968
GI number: 186476968
Start: 2490152
End: 2490622
Strand: Direct
Name: 186476968
Synonym: Bphy_2217
Alternate gene names: NA
Gene position: 2490152-2490622 (Clockwise)
Preceding gene: 186476967
Following gene: 186476969
Centisome position: 71.57
GC content: 62.42
Gene sequence:
>471_bases ATGCGCTACTGGCTGATGAAGTCCGAACCGGACGAAGCAAGCATCGACGACCTTGCGAATGCGCCGCAGCGCACGCTGCC GTGGACGGGTGTGCGCAACTATCAGGCGCGCAACTTCATGCGCGACATCATGAAGATCGGCGACGGCGTGCTCTTCTATC ACTCGAGCTGCCCGGAGCCGGGCATCGCGGGCATCGCCGAGGTGTCCTCGACGCCCTACCCCGACCCGACCCAATTCGAT CCGAAGAGCCCGTACTACGACGAAAGATCGAACCGGGAAACGCCGCGCTGGACGCTAGTCGATGTGGTGTTCAAGAAGAA GATCGCGCTGATACCGCTGGCCGAGTTGCGCGAGCATCCCGAACTCGCCGACATGCGCGTGCTCGCGAAGGGCAACCGCC TGTCGATCACGCCCGTCACGGAAGCCGAATGGGCATTCATCACGAAGCAGCTCGCGAAACGAGCAGCATGA
Upstream 100 bases:
>100_bases TGCATGGCATGCAGACGACGTGTGTGGTGTGACAAGCAGCGGATCGCTAGAGCAAAACTGTTCGCAAACACTTTTTTCTT TCTCACGTTCAATCCGACTC
Downstream 100 bases:
>100_bases TGCGCAATGCGCGTTTGCGCTGACGCATGGCAATCCGTTGAAATCACATTCGAACAGCCACTCGGGGAACCAGACGGCCC TTTCAGGCGCCTAACCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MRYWLMKSEPDEASIDDLANAPQRTLPWTGVRNYQARNFMRDIMKIGDGVLFYHSSCPEPGIAGIAEVSSTPYPDPTQFD PKSPYYDERSNRETPRWTLVDVVFKKKIALIPLAELREHPELADMRVLAKGNRLSITPVTEAEWAFITKQLAKRAA
Sequences:
>Translated_156_residues MRYWLMKSEPDEASIDDLANAPQRTLPWTGVRNYQARNFMRDIMKIGDGVLFYHSSCPEPGIAGIAEVSSTPYPDPTQFD PKSPYYDERSNRETPRWTLVDVVFKKKIALIPLAELREHPELADMRVLAKGNRLSITPVTEAEWAFITKQLAKRAA >Mature_156_residues MRYWLMKSEPDEASIDDLANAPQRTLPWTGVRNYQARNFMRDIMKIGDGVLFYHSSCPEPGIAGIAEVSSTPYPDPTQFD PKSPYYDERSNRETPRWTLVDVVFKKKIALIPLAELREHPELADMRVLAKGNRLSITPVTEAEWAFITKQLAKRAA
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=163, Percent_Identity=44.7852760736196, Blast_Score=141, Evalue=2e-34, Organism=Homo sapiens, GI40806221, Length=163, Percent_Identity=44.7852760736196, Blast_Score=141, Evalue=2e-34, Organism=Homo sapiens, GI7661804, Length=163, Percent_Identity=44.7852760736196, Blast_Score=141, Evalue=2e-34, Organism=Homo sapiens, GI83267859, Length=111, Percent_Identity=45.945945945946, Blast_Score=115, Evalue=1e-26, Organism=Homo sapiens, GI40806219, Length=111, Percent_Identity=45.945945945946, Blast_Score=115, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17825; Mature: 17825
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYWLMKSEPDEASIDDLANAPQRTLPWTGVRNYQARNFMRDIMKIGDGVLFYHSSCPEP CEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC GIAGIAEVSSTPYPDPTQFDPKSPYYDERSNRETPRWTLVDVVFKKKIALIPLAELREHP CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCC ELADMRVLAKGNRLSITPVTEAEWAFITKQLAKRAA CHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRYWLMKSEPDEASIDDLANAPQRTLPWTGVRNYQARNFMRDIMKIGDGVLFYHSSCPEP CEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC GIAGIAEVSSTPYPDPTQFDPKSPYYDERSNRETPRWTLVDVVFKKKIALIPLAELREHP CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCC ELADMRVLAKGNRLSITPVTEAEWAFITKQLAKRAA CHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA