| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is secG [H]
Identifier: 186476765
GI number: 186476765
Start: 2260698
End: 2261090
Strand: Reverse
Name: secG [H]
Synonym: Bphy_2010
Alternate gene names: 186476765
Gene position: 2261090-2260698 (Counterclockwise)
Preceding gene: 186476766
Following gene: 186476764
Centisome position: 64.99
GC content: 59.54
Gene sequence:
>393_bases ATGCTGTATTTGAAAACGTTGATCATTGTCGTGCAGTTGCTGTCGGCGCTGGGTGTCATCGGCCTCGTGCTTCTGCAGCA CGGCAAGGGCGCCGACATGGGCGCAGCTTTCGGTAGTGGTGCGTCGGGCAGCCTCTTCGGCGCGACAGGTTCTGCTAATT TTCTGTCACGTACCACTGCGATACTGGCAGCTGTATTCTTCGTCACCACGTTGGCACTGACTTACCTCGGCGCGTATCAC TCGAAACCTTCTGCAGGTGTGCTTGGTAACGTGCCGGCTGCATCGGCGCCTGTTGCGGCATCGGCTGCTCCTGCTGCGTC GGCATCGGCTAATGCATCGGCTCCAGTCGCCGCATCTGCAGCTTCCGCGCCAGGCCAGGACGTGCCGAAATAA
Upstream 100 bases:
>100_bases CGGCCGCGCGCTGATATCAAGGCAGAATGCCCGGGCGAGGATGACCCATTGCGTGCAGCATGCGGTGCTGTGCGGTTAAA TAAAGACTCAGGTGAGTGTG
Downstream 100 bases:
>100_bases ATTTTCGAGGAAAACACGTTTGTGCGTTGAACAAACTGTTTAACCGGGTTACAATTCAAGTCTTGAAGCGATTCGCGGGT TTTACAAAAAGTTGTTCCCG
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MLYLKTLIIVVQLLSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTAILAAVFFVTTLALTYLGAYH SKPSAGVLGNVPAASAPVAASAAPAASASANASAPVAASAASAPGQDVPK
Sequences:
>Translated_130_residues MLYLKTLIIVVQLLSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTAILAAVFFVTTLALTYLGAYH SKPSAGVLGNVPAASAPVAASAAPAASASANASAPVAASAASAPGQDVPK >Mature_130_residues MLYLKTLIIVVQLLSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTAILAAVFFVTTLALTYLGAYH SKPSAGVLGNVPAASAPVAASAAPAASASANASAPVAASAASAPGQDVPK
Specific function: Involved in protein export. Participates in an early event of protein translocation [H]
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secG family [H]
Homologues:
Organism=Escherichia coli, GI1789565, Length=127, Percent_Identity=38.5826771653543, Blast_Score=87, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004692 [H]
Pfam domain/function: PF03840 SecG [H]
EC number: NA
Molecular weight: Translated: 12455; Mature: 12455
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYLKTLIIVVQLLSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHH ILAAVFFVTTLALTYLGAYHSKPSAGVLGNVPAASAPVAASAAPAASASANASAPVAASA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASAPGQDVPK CCCCCCCCCC >Mature Secondary Structure MLYLKTLIIVVQLLSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHH ILAAVFFVTTLALTYLGAYHSKPSAGVLGNVPAASAPVAASAAPAASASANASAPVAASA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASAPGQDVPK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]