| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476504
Identifier: 186476504
GI number: 186476504
Start: 1989197
End: 1989856
Strand: Direct
Name: 186476504
Synonym: Bphy_1746
Alternate gene names: NA
Gene position: 1989197-1989856 (Clockwise)
Preceding gene: 186476502
Following gene: 186476508
Centisome position: 57.17
GC content: 67.88
Gene sequence:
>660_bases ATGAAGATGCGCGCTGCGCAGGTGCTCGAGCTCGTTGTCAACCTCGCGTTGCCTTGGGTTGCCTATCGCCTCGCGCTACC GCACTGGGGCGAAACGGGCGGACTGATCGCGTCCGCCGTGCCGCCCGTCGTGTGGAGCATCGTCGAGCTGGTGCGCTTCA GGCGCGCCGACGCGCTCAGCCTGACAGTGCTTCTCGGCATCGTGCTGTCGATCGGCGCGATGGCCCTCGGCGGCGATCCG CGCATGCTGCTGTTCCGCGAGTCGCTGGTGTCGGGCGCGATCGGCATCGCGTTTTTGCTGTCGCTGCTGCGGGGGCGCCC TGCCGTGTTTTATCTGACGCGCGCATTCGTCGCCCGTGAGATGACGAACGGCGCCGCGCATATCGACATGCTGTGGCGCG AGCGTCCCGCGTTCGCTCGCGGGTTGCGCGTGCTGACGGCCACGTGGGGCATCGGCCTCGCGAGCGAAACCGCACTGCGC GGCTGGATGGCCTGGCACTGGCCGATCGAGCGCGTGCTGGTGATGTCGCCTTTCGTCGGCTATGGCATCTTTGGCGGGCT GATGATCTGGACGCTCTGGTACCGGCGCACGCTGCGCGATCTCGCGCAGGATCAGACCGATTCCGAAGCGGAGCCGCCGC GCGGCACGGCAGCCAACTAA
Upstream 100 bases:
>100_bases CGCACGGCCGCCGGTGCTTCAAGTGGATAGCGCCGCTCGTTTGCCGTCTTCCGCCGATCTCGTCGATACTGAGGCTTTCC GCCTGAGGGCAACTATCGTG
Downstream 100 bases:
>100_bases CGCCCACCCGCTTCCATCGCCTCGGCGATCCGCGCAGCCAGTCCCGAATCGCGCTGGGTCGGCGTCGCGATCGCGCGCAT CAGCACAGCGCGCGAGCCGA
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MKMRAAQVLELVVNLALPWVAYRLALPHWGETGGLIASAVPPVVWSIVELVRFRRADALSLTVLLGIVLSIGAMALGGDP RMLLFRESLVSGAIGIAFLLSLLRGRPAVFYLTRAFVAREMTNGAAHIDMLWRERPAFARGLRVLTATWGIGLASETALR GWMAWHWPIERVLVMSPFVGYGIFGGLMIWTLWYRRTLRDLAQDQTDSEAEPPRGTAAN
Sequences:
>Translated_219_residues MKMRAAQVLELVVNLALPWVAYRLALPHWGETGGLIASAVPPVVWSIVELVRFRRADALSLTVLLGIVLSIGAMALGGDP RMLLFRESLVSGAIGIAFLLSLLRGRPAVFYLTRAFVAREMTNGAAHIDMLWRERPAFARGLRVLTATWGIGLASETALR GWMAWHWPIERVLVMSPFVGYGIFGGLMIWTLWYRRTLRDLAQDQTDSEAEPPRGTAAN >Mature_219_residues MKMRAAQVLELVVNLALPWVAYRLALPHWGETGGLIASAVPPVVWSIVELVRFRRADALSLTVLLGIVLSIGAMALGGDP RMLLFRESLVSGAIGIAFLLSLLRGRPAVFYLTRAFVAREMTNGAAHIDMLWRERPAFARGLRVLTATWGIGLASETALR GWMAWHWPIERVLVMSPFVGYGIFGGLMIWTLWYRRTLRDLAQDQTDSEAEPPRGTAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24252; Mature: 24252
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMRAAQVLELVVNLALPWVAYRLALPHWGETGGLIASAVPPVVWSIVELVRFRRADALS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH LTVLLGIVLSIGAMALGGDPRMLLFRESLVSGAIGIAFLLSLLRGRPAVFYLTRAFVARE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH MTNGAAHIDMLWRERPAFARGLRVLTATWGIGLASETALRGWMAWHWPIERVLVMSPFVG HCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH YGIFGGLMIWTLWYRRTLRDLAQDQTDSEAEPPRGTAAN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKMRAAQVLELVVNLALPWVAYRLALPHWGETGGLIASAVPPVVWSIVELVRFRRADALS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH LTVLLGIVLSIGAMALGGDPRMLLFRESLVSGAIGIAFLLSLLRGRPAVFYLTRAFVARE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH MTNGAAHIDMLWRERPAFARGLRVLTATWGIGLASETALRGWMAWHWPIERVLVMSPFVG HCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH YGIFGGLMIWTLWYRRTLRDLAQDQTDSEAEPPRGTAAN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA