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The map label for this gene is yccS [C]

Identifier: 186476508

GI number: 186476508

Start: 1999163

End: 2001583

Strand: Direct

Name: yccS [C]

Synonym: Bphy_1750

Alternate gene names: 186476508

Gene position: 1999163-2001583 (Clockwise)

Preceding gene: 186476504

Following gene: 186476511

Centisome position: 57.46

GC content: 63.53

Gene sequence:

>2421_bases
ATGCGCTATTCAGTCGAAATCAAAAAGTTTCTGTATAGCCAGTACTTCTACGGCGGCTTGCGCATTGCAGTGGGCGTGTC
GCTGCCCGCCATTCTTTCCCTCATCGTCTTCCACAACCGGGAACTCGGCTTCACGATCGCGACGGGCGCGCTCGGTGCGT
GCGCCGTCGACATGCCCGGCCCGCTCAAGTACAAACACAACGAAATGCTCGCGTGCAGCGTGATCGGCTTCCTCGCCGCG
CTCGCCACTGGCCTCGCGACAGTCAACCCCGTCGCGCTGTGGTGCACCGTCGTGCCACTCACCTTCGTACTGTCACTGAT
CGTCGTCTACGGGAACCGCTGGCCGCAGATCAGCTTCGCGACGCTCTTCATGATGATCATGACGCTCGAAGAGCATTTCA
CCCCGCTGCAGGCACTCGTCAACGCGTCGTGGATGCTCGTGGGCGGCCTGTGGTTCACGTACTGGTCGACCTTCGTCAGC
CGCTGGATGATGTACCGGATCGAACAGCAGGCGCTCGCCGAGAGCGTGTTCGCGCTGGCCGACTACCTGCTCGCGCGCGC
CGACTTCTTCGATCTCGACAACGATCTCGACGAGTGCTATCGCAACCTCGTCGCCAAACAGATCGCGGCCGTGGCCATGC
AGGACGCCGCGCGCGACATCGTGCTGCGCAACCTGCCCAAGCTGAAAAGCGGACGGCTCGAGCCGCGTCGGGCGACGCTC
TTCAATCTGTTCATCCATATCGTCGACCTGCATGAACAGTTCGTCGGCGCGCATACGGACTACCCACTCGTGCGCAATAC
CTTCGGCGGTTCGGATCTGCTGATCTTCTATCGCGACCTGATCCGCAAGGCTGCAGCCGATCTCGAAGACATCGGTCTTG
CCGTGCTGCAGAACGAGCCGCCGCGCGCACGCATCAGCGTCAAGGCCGAACTGCGCGCGATCGAATATGAAATCGAGCTG
ATGCGCAAGCGGGATCTGCCGAACAGGCACCCCGAAGCCTACTCGACCATTTCGGCTTCGTTCAGGCGCGTGTGGAGCGC
GACGCGTCTGATCGAGCGGATGCGCAAGAATCTGGCGAACGAGGACAACACGAAGGAAACCGATCTGCGCATCGATCAGG
CGCTCACGCGTTTCGTGTCCAGCCGCCGCGTGCCGTTCGGCTCCATCTTCTCGAACCTGACGATGGCCTCGCCGAGCTTC
CGGCATGCGCTGCGTGTGACGATCGCTGTCGCAGTCGGCTTCTGGCTCGGGCGCCTGCTGCCGCTCACGAATGCCTACTG
GATCGTGATGACGACCGTCATCATTCTGAAACCCGGCTACTCGCTGACCAAGCAGCGCAACGGGCAGCGTATCGTCGGCA
CGCTGATCGGCTGCGCGGCAAGCATCGCGCTGATCATGAGCGTGAAGTCGCCGCATGTGCTCATTATCGTGATGTTCGCG
TCGATGGTGATGAGCTACAGCCTGCTGCTCTTCAACTACACGGCGAGCGTCGTGTTCACGTCATCGTATGTGTTGCTGCT
GTTCCATCTGCTCGCGCCCGGCAGCCTGCACATCATCGGCGAGCGCGCGATCGACACGGTCGTCGGGTGCGCGATCGCGA
TCGCCGCGAGCCACCTGTTCCCGTATTGGGAATACCGGCTGATGGGGAAGCTCGTCGACGACATGATCGCGGCGATGCGC
AGCTACCTCGAAGCGAGCTGGTGGTGGGGAGGCAAGCCGGCCGCGGCTGCCGCTGTGATCGCGCCGTCCGCGCTAACAGA
AGCGGCCGCGCTCGCACCTGCCGTGGCCGTCGCGGAGGTCGCGGCGAGCGGTGCAGACGGGGTGGCGGAAGCAGCCGTGG
CGGCGTCGGCAGCGGGTGTCTCGGTCAGCGCGACCACGGCTGCGAGGCCGTCGGCCCCGACGCCCGCCGCCGCTGCCGCC
GCGAGCGCGCTCGATCGCGACTATCGCTATCGGCTGGCGCGAAAGAACGTACACGTCGCGTTTGCCAATCTGGGGCAGGC
GTTTCAACGGATGATGCTCGAGCCCAAATCGGCGCAGAAGTTCGTGCCGGAACTGAACGACCTGCTCGTACGCTCGCATG
TGCTCGCCTCGCAGATCACAGCGGCGGCACCGTTGCTGCGCACCTCTTCCCAGCAGATGGGCGGCCCGTCGCATCAGCCG
CTGCAACGGGCGCTGACGCTGATTCGCGACAACCTGACGCACGCCGAGGAAGGCAATCCGCCGCCCGCCGATCAGACTGA
AATCTCGAAACAGATGACGCGCGAGCTCGACAAGTTGGTCGTCGAGGCGGAACGCTCGCCCGACTATGCGCCCGATGCCG
TGCATGAACTGAGGCTGCTCGCGCATCAATGCAAGCAGATGCTGGCGGCGTCCTTCCTGATTCGCAAGGATGCGAGTGTG
ATCCGGTTGCCCGAGAACTGA

Upstream 100 bases:

>100_bases
TGGTGCGCGCATGGTCAAATCAGTTAGACTCGACGGCAGTTCGAGGCCGGGAATGGGCCCGACTGCTTCATCAATATGGA
TACGAGACACCAGGCGGTCG

Downstream 100 bases:

>100_bases
ACCCGGCCCCGCCTACTGCGACGCGCCCTTTGCGGCGTTGACGGCAGCCGCCGCTGACGACGCGGCCGAAGACACCGAAT
CGACGGCATTCTCGCGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 806; Mature: 806

Protein sequence:

>806_residues
MRYSVEIKKFLYSQYFYGGLRIAVGVSLPAILSLIVFHNRELGFTIATGALGACAVDMPGPLKYKHNEMLACSVIGFLAA
LATGLATVNPVALWCTVVPLTFVLSLIVVYGNRWPQISFATLFMMIMTLEEHFTPLQALVNASWMLVGGLWFTYWSTFVS
RWMMYRIEQQALAESVFALADYLLARADFFDLDNDLDECYRNLVAKQIAAVAMQDAARDIVLRNLPKLKSGRLEPRRATL
FNLFIHIVDLHEQFVGAHTDYPLVRNTFGGSDLLIFYRDLIRKAAADLEDIGLAVLQNEPPRARISVKAELRAIEYEIEL
MRKRDLPNRHPEAYSTISASFRRVWSATRLIERMRKNLANEDNTKETDLRIDQALTRFVSSRRVPFGSIFSNLTMASPSF
RHALRVTIAVAVGFWLGRLLPLTNAYWIVMTTVIILKPGYSLTKQRNGQRIVGTLIGCAASIALIMSVKSPHVLIIVMFA
SMVMSYSLLLFNYTASVVFTSSYVLLLFHLLAPGSLHIIGERAIDTVVGCAIAIAASHLFPYWEYRLMGKLVDDMIAAMR
SYLEASWWWGGKPAAAAAVIAPSALTEAAALAPAVAVAEVAASGADGVAEAAVAASAAGVSVSATTAARPSAPTPAAAAA
ASALDRDYRYRLARKNVHVAFANLGQAFQRMMLEPKSAQKFVPELNDLLVRSHVLASQITAAAPLLRTSSQQMGGPSHQP
LQRALTLIRDNLTHAEEGNPPPADQTEISKQMTRELDKLVVEAERSPDYAPDAVHELRLLAHQCKQMLAASFLIRKDASV
IRLPEN

Sequences:

>Translated_806_residues
MRYSVEIKKFLYSQYFYGGLRIAVGVSLPAILSLIVFHNRELGFTIATGALGACAVDMPGPLKYKHNEMLACSVIGFLAA
LATGLATVNPVALWCTVVPLTFVLSLIVVYGNRWPQISFATLFMMIMTLEEHFTPLQALVNASWMLVGGLWFTYWSTFVS
RWMMYRIEQQALAESVFALADYLLARADFFDLDNDLDECYRNLVAKQIAAVAMQDAARDIVLRNLPKLKSGRLEPRRATL
FNLFIHIVDLHEQFVGAHTDYPLVRNTFGGSDLLIFYRDLIRKAAADLEDIGLAVLQNEPPRARISVKAELRAIEYEIEL
MRKRDLPNRHPEAYSTISASFRRVWSATRLIERMRKNLANEDNTKETDLRIDQALTRFVSSRRVPFGSIFSNLTMASPSF
RHALRVTIAVAVGFWLGRLLPLTNAYWIVMTTVIILKPGYSLTKQRNGQRIVGTLIGCAASIALIMSVKSPHVLIIVMFA
SMVMSYSLLLFNYTASVVFTSSYVLLLFHLLAPGSLHIIGERAIDTVVGCAIAIAASHLFPYWEYRLMGKLVDDMIAAMR
SYLEASWWWGGKPAAAAAVIAPSALTEAAALAPAVAVAEVAASGADGVAEAAVAASAAGVSVSATTAARPSAPTPAAAAA
ASALDRDYRYRLARKNVHVAFANLGQAFQRMMLEPKSAQKFVPELNDLLVRSHVLASQITAAAPLLRTSSQQMGGPSHQP
LQRALTLIRDNLTHAEEGNPPPADQTEISKQMTRELDKLVVEAERSPDYAPDAVHELRLLAHQCKQMLAASFLIRKDASV
IRLPEN
>Mature_806_residues
MRYSVEIKKFLYSQYFYGGLRIAVGVSLPAILSLIVFHNRELGFTIATGALGACAVDMPGPLKYKHNEMLACSVIGFLAA
LATGLATVNPVALWCTVVPLTFVLSLIVVYGNRWPQISFATLFMMIMTLEEHFTPLQALVNASWMLVGGLWFTYWSTFVS
RWMMYRIEQQALAESVFALADYLLARADFFDLDNDLDECYRNLVAKQIAAVAMQDAARDIVLRNLPKLKSGRLEPRRATL
FNLFIHIVDLHEQFVGAHTDYPLVRNTFGGSDLLIFYRDLIRKAAADLEDIGLAVLQNEPPRARISVKAELRAIEYEIEL
MRKRDLPNRHPEAYSTISASFRRVWSATRLIERMRKNLANEDNTKETDLRIDQALTRFVSSRRVPFGSIFSNLTMASPSF
RHALRVTIAVAVGFWLGRLLPLTNAYWIVMTTVIILKPGYSLTKQRNGQRIVGTLIGCAASIALIMSVKSPHVLIIVMFA
SMVMSYSLLLFNYTASVVFTSSYVLLLFHLLAPGSLHIIGERAIDTVVGCAIAIAASHLFPYWEYRLMGKLVDDMIAAMR
SYLEASWWWGGKPAAAAAVIAPSALTEAAALAPAVAVAEVAASGADGVAEAAVAASAAGVSVSATTAARPSAPTPAAAAA
ASALDRDYRYRLARKNVHVAFANLGQAFQRMMLEPKSAQKFVPELNDLLVRSHVLASQITAAAPLLRTSSQQMGGPSHQP
LQRALTLIRDNLTHAEEGNPPPADQTEISKQMTRELDKLVVEAERSPDYAPDAVHELRLLAHQCKQMLAASFLIRKDASV
IRLPEN

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=669, Percent_Identity=23.9162929745889, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI87082248, Length=190, Percent_Identity=33.6842105263158, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88873; Mature: 88873

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSVEIKKFLYSQYFYGGLRIAVGVSLPAILSLIVFHNRELGFTIATGALGACAVDMPG
CCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCEEECCCC
PLKYKHNEMLACSVIGFLAALATGLATVNPVALWCTVVPLTFVLSLIVVYGNRWPQISFA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TLFMMIMTLEEHFTPLQALVNASWMLVGGLWFTYWSTFVSRWMMYRIEQQALAESVFALA
HHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLLARADFFDLDNDLDECYRNLVAKQIAAVAMQDAARDIVLRNLPKLKSGRLEPRRATL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
FNLFIHIVDLHEQFVGAHTDYPLVRNTFGGSDLLIFYRDLIRKAAADLEDIGLAVLQNEP
HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHCCCCEECCCC
PRARISVKAELRAIEYEIELMRKRDLPNRHPEAYSTISASFRRVWSATRLIERMRKNLAN
CCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EDNTKETDLRIDQALTRFVSSRRVPFGSIFSNLTMASPSFRHALRVTIAVAVGFWLGRLL
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
PLTNAYWIVMTTVIILKPGYSLTKQRNGQRIVGTLIGCAASIALIMSVKSPHVLIIVMFA
HHCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SMVMSYSLLLFNYTASVVFTSSYVLLLFHLLAPGSLHIIGERAIDTVVGCAIAIAASHLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
PYWEYRLMGKLVDDMIAAMRSYLEASWWWGGKPAAAAAVIAPSALTEAAALAPAVAVAEV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHH
AASGADGVAEAAVAASAAGVSVSATTAARPSAPTPAAAAAASALDRDYRYRLARKNVHVA
HHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
FANLGQAFQRMMLEPKSAQKFVPELNDLLVRSHVLASQITAAAPLLRTSSQQMGGPSHQP
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHH
LQRALTLIRDNLTHAEEGNPPPADQTEISKQMTRELDKLVVEAERSPDYAPDAVHELRLL
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
AHQCKQMLAASFLIRKDASVIRLPEN
HHHHHHHHHHHHHHHCCCCEEECCCC
>Mature Secondary Structure
MRYSVEIKKFLYSQYFYGGLRIAVGVSLPAILSLIVFHNRELGFTIATGALGACAVDMPG
CCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCEEECCCC
PLKYKHNEMLACSVIGFLAALATGLATVNPVALWCTVVPLTFVLSLIVVYGNRWPQISFA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TLFMMIMTLEEHFTPLQALVNASWMLVGGLWFTYWSTFVSRWMMYRIEQQALAESVFALA
HHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLLARADFFDLDNDLDECYRNLVAKQIAAVAMQDAARDIVLRNLPKLKSGRLEPRRATL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
FNLFIHIVDLHEQFVGAHTDYPLVRNTFGGSDLLIFYRDLIRKAAADLEDIGLAVLQNEP
HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHCCCCEECCCC
PRARISVKAELRAIEYEIELMRKRDLPNRHPEAYSTISASFRRVWSATRLIERMRKNLAN
CCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EDNTKETDLRIDQALTRFVSSRRVPFGSIFSNLTMASPSFRHALRVTIAVAVGFWLGRLL
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
PLTNAYWIVMTTVIILKPGYSLTKQRNGQRIVGTLIGCAASIALIMSVKSPHVLIIVMFA
HHCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SMVMSYSLLLFNYTASVVFTSSYVLLLFHLLAPGSLHIIGERAIDTVVGCAIAIAASHLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
PYWEYRLMGKLVDDMIAAMRSYLEASWWWGGKPAAAAAVIAPSALTEAAALAPAVAVAEV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHH
AASGADGVAEAAVAASAAGVSVSATTAARPSAPTPAAAAAASALDRDYRYRLARKNVHVA
HHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
FANLGQAFQRMMLEPKSAQKFVPELNDLLVRSHVLASQITAAAPLLRTSSQQMGGPSHQP
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHH
LQRALTLIRDNLTHAEEGNPPPADQTEISKQMTRELDKLVVEAERSPDYAPDAVHELRLL
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
AHQCKQMLAASFLIRKDASVIRLPEN
HHHHHHHHHHHHHHHCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]