Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476474

Identifier: 186476474

GI number: 186476474

Start: 1953889

End: 1954374

Strand: Direct

Name: 186476474

Synonym: Bphy_1716

Alternate gene names: NA

Gene position: 1953889-1954374 (Clockwise)

Preceding gene: 186476472

Following gene: 186476481

Centisome position: 56.16

GC content: 61.11

Gene sequence:

>486_bases
ATGACATCGCTTACCCAACGCGCTCGTGTGGCGTTCGGCAAACCGTTCAGATACGCGGCCGTCGCCGGATTGCTGCTTGC
TGGCAACGTGACGGCATTCGCACAGACTGACACGCCCGTCGGCACATGGCAGACCATTGACGACCACACAGGCCACCCGA
AGGCGCTGGTTCAGATCACGCAGGACGCGAACGGCTCGCTGAACGGCAAGGTCGTCAAGGGACTCGGACCCAACGATCAG
CCCGACCGCCGCTGCACGGCCTGTACGGACGCGCGCAAGGATCAGCCGATTCTCGGCATGACGATCATCAGCGATATGAA
AAAGGATGGCGATGACTGGGACGGCGGGCAGATTCTCGACCCGGAAAACGGCAAGCTCTACAAGTGCAAGATGCACGTCG
AAGACGGCGGACAAAAGCTGGTGGTTCGGGGGTACATCGGCGTATCGCTGCTCGGGCGTTCGCAGACGTGGGTTCGTCAG
AACTGA

Upstream 100 bases:

>100_bases
TCCCATCCTGCACCAGACAGGCATGGCGCCGACTCTCAAGTCCTTTACAACGGCGCCGCGCGACACGCATCGCGACGATT
TTCAAACAAGGAGAAAGACA

Downstream 100 bases:

>100_bases
GGTGGTACGGCCGCGCTACCGCGCGCTGCAAACAGCGGAAGCGCCGAACAAGCCTGACGTAAAAAAGCCGGCCTGGCAGT
CACTTCGCGAGGCCGGCTTT

Product: putative signal peptide protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTSLTQRARVAFGKPFRYAAVAGLLLAGNVTAFAQTDTPVGTWQTIDDHTGHPKALVQITQDANGSLNGKVVKGLGPNDQ
PDRRCTACTDARKDQPILGMTIISDMKKDGDDWDGGQILDPENGKLYKCKMHVEDGGQKLVVRGYIGVSLLGRSQTWVRQ
N

Sequences:

>Translated_161_residues
MTSLTQRARVAFGKPFRYAAVAGLLLAGNVTAFAQTDTPVGTWQTIDDHTGHPKALVQITQDANGSLNGKVVKGLGPNDQ
PDRRCTACTDARKDQPILGMTIISDMKKDGDDWDGGQILDPENGKLYKCKMHVEDGGQKLVVRGYIGVSLLGRSQTWVRQ
N
>Mature_160_residues
TSLTQRARVAFGKPFRYAAVAGLLLAGNVTAFAQTDTPVGTWQTIDDHTGHPKALVQITQDANGSLNGKVVKGLGPNDQP
DRRCTACTDARKDQPILGMTIISDMKKDGDDWDGGQILDPENGKLYKCKMHVEDGGQKLVVRGYIGVSLLGRSQTWVRQN

Specific function: Unknown

COG id: COG4731

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17467; Mature: 17336

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLTQRARVAFGKPFRYAAVAGLLLAGNVTAFAQTDTPVGTWQTIDDHTGHPKALVQIT
CCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCEEEEEEE
QDANGSLNGKVVKGLGPNDQPDRRCTACTDARKDQPILGMTIISDMKKDGDDWDGGQILD
CCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCCEEEC
PENGKLYKCKMHVEDGGQKLVVRGYIGVSLLGRSQTWVRQN
CCCCCEEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEECC
>Mature Secondary Structure 
TSLTQRARVAFGKPFRYAAVAGLLLAGNVTAFAQTDTPVGTWQTIDDHTGHPKALVQIT
CCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCEEEEEEE
QDANGSLNGKVVKGLGPNDQPDRRCTACTDARKDQPILGMTIISDMKKDGDDWDGGQILD
CCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCCEEEC
PENGKLYKCKMHVEDGGQKLVVRGYIGVSLLGRSQTWVRQN
CCCCCEEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA