| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476444
Identifier: 186476444
GI number: 186476444
Start: 1916390
End: 1918156
Strand: Direct
Name: 186476444
Synonym: Bphy_1686
Alternate gene names: NA
Gene position: 1916390-1918156 (Clockwise)
Preceding gene: 186476443
Following gene: 186476446
Centisome position: 55.08
GC content: 58.52
Gene sequence:
>1767_bases ATGGCAATGAAATGGCCAACCTGGAACGTACAGCTCTTCCTGTCCTGGATTGTCGTCGGCACACTCGGTATAGCCGAAGG CATTTACGGTCGGCCGCAATACTACGGCGACTGGATTTCTTATCTCAATGTCAGTTGGGCCGTTGCTCACACCGACTGGC GAGAAATTTTCAACCCCTTCTGGAATCCAGGCTATCCCGCGTTGGTTGCCGCCGCGCGCTCGCTGGGCGTCCCTACCCCT GAGGGGGAGTGGCATGCGATCACGGCGATCAACTGGGTGATTTATCTGGTTGCCTATGCATCCTGGCGCGGCCTGATCAG AAATGCCCTTGCGCTATATTGGCCTGATTCGCTTGCACTGAACCGTCATCCATTTACGATCTGGATCGGAACCTGCGTTT TTCTTGGTGCCTGCCTGGGTCTCGAGACGGTTTCTGCCGTATGCCCAGACCTGCTCGTGACCACGTTCTTCCTGCTCGGA TCGAGTCTGCTTCTATCCCTGATCCGGCGGCGGAGCCTGCTCACCGCGACATTGCTTGGTCTGATCCTCGGTGCCGGTGT TTGGGTAAAGGGCGTGTTCACGCCATTCTCCTTTCTGTTCATTCTCACGCTTCTCATCTATTGCGGCGCGAGGCGCGGCT TGTGGCGACCAGTCGGAGCGGTCGTGGGAACCTTCGGTCTCCTTTTTGGCGTCTATATCGCCGGAATCTCCTGGTCCTAT GGCGAATTCACGCTGGGTGCGTCGGGAATGTTGAATTTCCCCTGGCACGTCAATGAACTGCCTCATTTCAGCAACTGGCA AGGCGGACCGGAGCAGTTCGGCCGGCCACTTCATCCAACGACTCAACTGATCGCCGACTTGCCAGCTTTCGGCTTTGGCA CACCTTTCCGGACAACTTACCCTCCGTATAACGACGTCGCGTACTGGTACAAGGGCTTTCGACACTTCTTCAGCCTCAAG CTCGAATTAATGGCGATCGTCCGGTGTGTCTGGAACCTGTTGCAGATACTCAAGCTAAATCCGATCGTGCTGGGGGTCGC GGTAGCTTTCCTGCTGTCGCTCGTCAGGCAGCCGTGGCGAGCGTCGCTCGGCAGGACAATAGTCCGGGCCTGGCCCTTAC TGTTGCCAACCGTCGCAGGTTTCGGCACCTATATGCTGGTTCATGTCGAAGAGCGCTATCTCAGCCCGTTCATCATGGTG ATCGCGCTTCTGACGTGGGCGCCGTTGCTCGACATGACGCTGCATTCCCGTCGCCTGCTTGCCACTGCTTTAGTCATCAT CTATGGCGCTGGCATGGTCGGCCAGCTTGTGCTGACCAATGCAGCTTCGCTCAAACCGGTGTTTCGTCAGTCGGACTATC ACGACGACCCGCATTGGCGGATTGCCAGCGCGTTGACTGCCTCAGGGTTGCAACCAGGTGACGCGGTGGCCGTGATCCGG GACACCCGTCCCACTGTCAGGGTCAGCTGGGCCTATGTATCGCGCTTGCGCATCGTCGCCGAGTTCGGCGGTCTGCCATA CCGTATCGAGCCGCAGGACCGCACCCGCTTCGATGAAAACGTCGAACCCATCCACCCGGACTACAGCGAAGTATTCTGGA CGCAGCTTACGCCGCAACGGCGCGACGAGGTCATGAAGGCATTCGCTCAGAGCGGCGCGCGAGCGGTCGTGTCGCTATCG ATGCCCAACGTGCTGCCAGATCCCGGCTGGGTACCGTTGAAGGGGACGCCTGCCTGGCTTTACGTGTTTCCCAATGCGGC CAGATAG
Upstream 100 bases:
>100_bases GCAGACATCACATGCAACGTTACGCCCAGATGGGCGCAGACAAGGGTGGAATTCCCGCACCTGTCTGTCGCTCTTCCGGC TATGAACGCGGAGACGGCAC
Downstream 100 bases:
>100_bases CCAGATTCCCGACTGACGGGTATCTGCAATCGACGCGTGGCAAGATGCCGGCGCACTGGCTCAGGGTCCGGGCATGCCCG CTGGTGTGACTTCAAGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 588; Mature: 587
Protein sequence:
>588_residues MAMKWPTWNVQLFLSWIVVGTLGIAEGIYGRPQYYGDWISYLNVSWAVAHTDWREIFNPFWNPGYPALVAAARSLGVPTP EGEWHAITAINWVIYLVAYASWRGLIRNALALYWPDSLALNRHPFTIWIGTCVFLGACLGLETVSAVCPDLLVTTFFLLG SSLLLSLIRRRSLLTATLLGLILGAGVWVKGVFTPFSFLFILTLLIYCGARRGLWRPVGAVVGTFGLLFGVYIAGISWSY GEFTLGASGMLNFPWHVNELPHFSNWQGGPEQFGRPLHPTTQLIADLPAFGFGTPFRTTYPPYNDVAYWYKGFRHFFSLK LELMAIVRCVWNLLQILKLNPIVLGVAVAFLLSLVRQPWRASLGRTIVRAWPLLLPTVAGFGTYMLVHVEERYLSPFIMV IALLTWAPLLDMTLHSRRLLATALVIIYGAGMVGQLVLTNAASLKPVFRQSDYHDDPHWRIASALTASGLQPGDAVAVIR DTRPTVRVSWAYVSRLRIVAEFGGLPYRIEPQDRTRFDENVEPIHPDYSEVFWTQLTPQRRDEVMKAFAQSGARAVVSLS MPNVLPDPGWVPLKGTPAWLYVFPNAAR
Sequences:
>Translated_588_residues MAMKWPTWNVQLFLSWIVVGTLGIAEGIYGRPQYYGDWISYLNVSWAVAHTDWREIFNPFWNPGYPALVAAARSLGVPTP EGEWHAITAINWVIYLVAYASWRGLIRNALALYWPDSLALNRHPFTIWIGTCVFLGACLGLETVSAVCPDLLVTTFFLLG SSLLLSLIRRRSLLTATLLGLILGAGVWVKGVFTPFSFLFILTLLIYCGARRGLWRPVGAVVGTFGLLFGVYIAGISWSY GEFTLGASGMLNFPWHVNELPHFSNWQGGPEQFGRPLHPTTQLIADLPAFGFGTPFRTTYPPYNDVAYWYKGFRHFFSLK LELMAIVRCVWNLLQILKLNPIVLGVAVAFLLSLVRQPWRASLGRTIVRAWPLLLPTVAGFGTYMLVHVEERYLSPFIMV IALLTWAPLLDMTLHSRRLLATALVIIYGAGMVGQLVLTNAASLKPVFRQSDYHDDPHWRIASALTASGLQPGDAVAVIR DTRPTVRVSWAYVSRLRIVAEFGGLPYRIEPQDRTRFDENVEPIHPDYSEVFWTQLTPQRRDEVMKAFAQSGARAVVSLS MPNVLPDPGWVPLKGTPAWLYVFPNAAR >Mature_587_residues AMKWPTWNVQLFLSWIVVGTLGIAEGIYGRPQYYGDWISYLNVSWAVAHTDWREIFNPFWNPGYPALVAAARSLGVPTPE GEWHAITAINWVIYLVAYASWRGLIRNALALYWPDSLALNRHPFTIWIGTCVFLGACLGLETVSAVCPDLLVTTFFLLGS SLLLSLIRRRSLLTATLLGLILGAGVWVKGVFTPFSFLFILTLLIYCGARRGLWRPVGAVVGTFGLLFGVYIAGISWSYG EFTLGASGMLNFPWHVNELPHFSNWQGGPEQFGRPLHPTTQLIADLPAFGFGTPFRTTYPPYNDVAYWYKGFRHFFSLKL ELMAIVRCVWNLLQILKLNPIVLGVAVAFLLSLVRQPWRASLGRTIVRAWPLLLPTVAGFGTYMLVHVEERYLSPFIMVI ALLTWAPLLDMTLHSRRLLATALVIIYGAGMVGQLVLTNAASLKPVFRQSDYHDDPHWRIASALTASGLQPGDAVAVIRD TRPTVRVSWAYVSRLRIVAEFGGLPYRIEPQDRTRFDENVEPIHPDYSEVFWTQLTPQRRDEVMKAFAQSGARAVVSLSM PNVLPDPGWVPLKGTPAWLYVFPNAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65941; Mature: 65810
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMKWPTWNVQLFLSWIVVGTLGIAEGIYGRPQYYGDWISYLNVSWAVAHTDWREIFNPF CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHCCC WNPGYPALVAAARSLGVPTPEGEWHAITAINWVIYLVAYASWRGLIRNALALYWPDSLAL CCCCCHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NRHPFTIWIGTCVFLGACLGLETVSAVCPDLLVTTFFLLGSSLLLSLIRRRSLLTATLLG CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILGAGVWVKGVFTPFSFLFILTLLIYCGARRGLWRPVGAVVGTFGLLFGVYIAGISWSY HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC GEFTLGASGMLNFPWHVNELPHFSNWQGGPEQFGRPLHPTTQLIADLPAFGFGTPFRTTY CCEEECCCCCEECCEECCCCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCC PPYNDVAYWYKGFRHFFSLKLELMAIVRCVWNLLQILKLNPIVLGVAVAFLLSLVRQPWR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHH ASLGRTIVRAWPLLLPTVAGFGTYMLVHVEERYLSPFIMVIALLTWAPLLDMTLHSRRLL HHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATALVIIYGAGMVGQLVLTNAASLKPVFRQSDYHDDPHWRIASALTASGLQPGDAVAVIR HHHHHHHHCCCHHHHHHHHCCHHHCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEE DTRPTVRVSWAYVSRLRIVAEFGGLPYRIEPQDRTRFDENVEPIHPDYSEVFWTQLTPQR CCCCCEEEHHHHHHHHHHHHHHCCCCEEECCCHHCCCCCCCCCCCCCHHHHHHHHCCHHH RDEVMKAFAQSGARAVVSLSMPNVLPDPGWVPLKGTPAWLYVFPNAAR HHHHHHHHHHCCCEEEEEEECCCCCCCCCEEECCCCCEEEEECCCCCC >Mature Secondary Structure AMKWPTWNVQLFLSWIVVGTLGIAEGIYGRPQYYGDWISYLNVSWAVAHTDWREIFNPF CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHCCC WNPGYPALVAAARSLGVPTPEGEWHAITAINWVIYLVAYASWRGLIRNALALYWPDSLAL CCCCCHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NRHPFTIWIGTCVFLGACLGLETVSAVCPDLLVTTFFLLGSSLLLSLIRRRSLLTATLLG CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILGAGVWVKGVFTPFSFLFILTLLIYCGARRGLWRPVGAVVGTFGLLFGVYIAGISWSY HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC GEFTLGASGMLNFPWHVNELPHFSNWQGGPEQFGRPLHPTTQLIADLPAFGFGTPFRTTY CCEEECCCCCEECCEECCCCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCC PPYNDVAYWYKGFRHFFSLKLELMAIVRCVWNLLQILKLNPIVLGVAVAFLLSLVRQPWR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHH ASLGRTIVRAWPLLLPTVAGFGTYMLVHVEERYLSPFIMVIALLTWAPLLDMTLHSRRLL HHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATALVIIYGAGMVGQLVLTNAASLKPVFRQSDYHDDPHWRIASALTASGLQPGDAVAVIR HHHHHHHHCCCHHHHHHHHCCHHHCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEE DTRPTVRVSWAYVSRLRIVAEFGGLPYRIEPQDRTRFDENVEPIHPDYSEVFWTQLTPQR CCCCCEEEHHHHHHHHHHHHHHCCCCEEECCCHHCCCCCCCCCCCCCHHHHHHHHCCHHH RDEVMKAFAQSGARAVVSLSMPNVLPDPGWVPLKGTPAWLYVFPNAAR HHHHHHHHHHCCCEEEEEEECCCCCCCCCEEECCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA