| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is exoZ [H]
Identifier: 186476446
GI number: 186476446
Start: 1920030
End: 1921133
Strand: Direct
Name: exoZ [H]
Synonym: Bphy_1688
Alternate gene names: 186476446
Gene position: 1920030-1921133 (Clockwise)
Preceding gene: 186476444
Following gene: 186476453
Centisome position: 55.19
GC content: 60.96
Gene sequence:
>1104_bases ATGAACAAGCTCCAGTCTCTCACCGTATTGCGCGGCATTGCGGCCATCACCGTCATCTTCTATCACATCATGGCGCCGAC CGGGCACACGTTCGGCGAGTTCGGTGTCGATGTTTTCTTCGTCCTGAGCGGCTTCGTCATCGCGCTCGTTCTGGACAGCC CCGGCATCACCGCGCAACGCTACCTCTCGGATCGCATAGCGCGGATCGTGCCGCTCTACTGGTTGCTGACGTTCGTGGTC ATCGGCGGCACGCTTGTCGCGCCCTCCCTGTTCAACTCGACGACCGCCGACTTCGGCAATCTGCTGAAATCGCTGTTTTT CATTCCCTATCGCAAGGAAAGTGGCCTGATCTTCCCGATGTTGTTCGTCGGCTGGACGCTGAACTACGAGATGATGTTCT ACGTGGTCACGGCAATCTCGCTGGTCCTGATGCGTCGCCATCGGCTACTGTTCGTGTCCGCGGCGATCTTCATGATTTAT TGCGCGGCGACGGCATCGGCTTCGCGTGGCGCGTTTGCCGAGTTTTATTCGTATCAGCGCATGTTCGAGTTCCCGCTCGG CTTCGTGGTCTATCAGCTGTGGAAGCGCGGCGTGCTGATCAAGCCTGCGCTTGCCGGCGGCGTCGCAACCGCCGCCTACG TATGGATGGCGTACGTGAACTGGAACCAGCTGTCGAACGCGCACCTGCTTTACTTCGGCATTCCCGCGTTCCTGCTGGTC GCGAGCTGCCTGAGTCTCGAATCGAAGCTGGGTTCGGGCCCATTGACGAAAGGCGCATTGCTCGTAGGCGACGCCAGTTA TGCCATCTATCTGAGCCATCCGTACTGTGTCGAAGCCGCGCGCAAGCTGCTGGCGAATGTGATCGACGGCTTTGACGCGA CTGCGCCCGTCGGGGTGGCCATCATCATCGTCATCGCGACAGCCGTGGGCGTCGCACTCTACTGGTTCGTCGACAGGCCG CTGCATCGCAGCGCACGCAGGCTGTTGCAATCCGTGCCCGTCATTCCGTCGCGCGGCGCCAGACTGGCGGGCCTGAACCG CGAACTCATCGCCGCTGACGACGGGCCCACGCGCAAGGTGCAAGTCAATCACGACGCGCGCTAA
Upstream 100 bases:
>100_bases CAACTGCGCACTCGCTTGCGGCTTTGTAATGTCAGAATTAACCACGGAAATGCAGAGCATCCGCTCCGCCCGGCATTGGC GAATACGAAGATCGCGATAC
Downstream 100 bases:
>100_bases GCCGTCCTACGCGCCCGATCCGCCGGATGCTCTATCCGGACATGACACCCAACCCATCTCGAACGGCTGTGGCGCGCCAG TCCCAAGCCGCTTCGACGTT
Product: acyltransferase 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MNKLQSLTVLRGIAAITVIFYHIMAPTGHTFGEFGVDVFFVLSGFVIALVLDSPGITAQRYLSDRIARIVPLYWLLTFVV IGGTLVAPSLFNSTTADFGNLLKSLFFIPYRKESGLIFPMLFVGWTLNYEMMFYVVTAISLVLMRRHRLLFVSAAIFMIY CAATASASRGAFAEFYSYQRMFEFPLGFVVYQLWKRGVLIKPALAGGVATAAYVWMAYVNWNQLSNAHLLYFGIPAFLLV ASCLSLESKLGSGPLTKGALLVGDASYAIYLSHPYCVEAARKLLANVIDGFDATAPVGVAIIIVIATAVGVALYWFVDRP LHRSARRLLQSVPVIPSRGARLAGLNRELIAADDGPTRKVQVNHDAR
Sequences:
>Translated_367_residues MNKLQSLTVLRGIAAITVIFYHIMAPTGHTFGEFGVDVFFVLSGFVIALVLDSPGITAQRYLSDRIARIVPLYWLLTFVV IGGTLVAPSLFNSTTADFGNLLKSLFFIPYRKESGLIFPMLFVGWTLNYEMMFYVVTAISLVLMRRHRLLFVSAAIFMIY CAATASASRGAFAEFYSYQRMFEFPLGFVVYQLWKRGVLIKPALAGGVATAAYVWMAYVNWNQLSNAHLLYFGIPAFLLV ASCLSLESKLGSGPLTKGALLVGDASYAIYLSHPYCVEAARKLLANVIDGFDATAPVGVAIIIVIATAVGVALYWFVDRP LHRSARRLLQSVPVIPSRGARLAGLNRELIAADDGPTRKVQVNHDAR >Mature_367_residues MNKLQSLTVLRGIAAITVIFYHIMAPTGHTFGEFGVDVFFVLSGFVIALVLDSPGITAQRYLSDRIARIVPLYWLLTFVV IGGTLVAPSLFNSTTADFGNLLKSLFFIPYRKESGLIFPMLFVGWTLNYEMMFYVVTAISLVLMRRHRLLFVSAAIFMIY CAATASASRGAFAEFYSYQRMFEFPLGFVVYQLWKRGVLIKPALAGGVATAAYVWMAYVNWNQLSNAHLLYFGIPAFLLV ASCLSLESKLGSGPLTKGALLVGDASYAIYLSHPYCVEAARKLLANVIDGFDATAPVGVAIIIVIATAVGVALYWFVDRP LHRSARRLLQSVPVIPSRGARLAGLNRELIAADDGPTRKVQVNHDAR
Specific function: Required for the acetyl modification of the third sugar (glucose) of the octasaccharide subunit of succinoglycan (EPS I) [H]
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
Organism=Caenorhabditis elegans, GI86562056, Length=303, Percent_Identity=26.0726072607261, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17509001, Length=318, Percent_Identity=26.4150943396226, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 40356; Mature: 40356
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLQSLTVLRGIAAITVIFYHIMAPTGHTFGEFGVDVFFVLSGFVIALVLDSPGITAQR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHH YLSDRIARIVPLYWLLTFVVIGGTLVAPSLFNSTTADFGNLLKSLFFIPYRKESGLIFPM HHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHCCCHHHHHHHHHHHHCCCEECCCCCCHHH LFVGWTLNYEMMFYVVTAISLVLMRRHRLLFVSAAIFMIYCAATASASRGAFAEFYSYQR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH MFEFPLGFVVYQLWKRGVLIKPALAGGVATAAYVWMAYVNWNQLSNAHLLYFGIPAFLLV HHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHH ASCLSLESKLGSGPLTKGALLVGDASYAIYLSHPYCVEAARKLLANVIDGFDATAPVGVA HHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHH IIIVIATAVGVALYWFVDRPLHRSARRLLQSVPVIPSRGARLAGLNRELIAADDGPTRKV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEECCCCCCEEE QVNHDAR EECCCCC >Mature Secondary Structure MNKLQSLTVLRGIAAITVIFYHIMAPTGHTFGEFGVDVFFVLSGFVIALVLDSPGITAQR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHH YLSDRIARIVPLYWLLTFVVIGGTLVAPSLFNSTTADFGNLLKSLFFIPYRKESGLIFPM HHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHCCCHHHHHHHHHHHHCCCEECCCCCCHHH LFVGWTLNYEMMFYVVTAISLVLMRRHRLLFVSAAIFMIYCAATASASRGAFAEFYSYQR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH MFEFPLGFVVYQLWKRGVLIKPALAGGVATAAYVWMAYVNWNQLSNAHLLYFGIPAFLLV HHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHH ASCLSLESKLGSGPLTKGALLVGDASYAIYLSHPYCVEAARKLLANVIDGFDATAPVGVA HHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHH IIIVIATAVGVALYWFVDRPLHRSARRLLQSVPVIPSRGARLAGLNRELIAADDGPTRKV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEECCCCCCEEE QVNHDAR EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1787800; 11481431; 8439670 [H]