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The map label for this gene is yfdH [C]

Identifier: 186476443

GI number: 186476443

Start: 1914833

End: 1915915

Strand: Direct

Name: yfdH [C]

Synonym: Bphy_1685

Alternate gene names: 186476443

Gene position: 1914833-1915915 (Clockwise)

Preceding gene: 186476433

Following gene: 186476444

Centisome position: 55.04

GC content: 58.54

Gene sequence:

>1083_bases
ATGGACTATGTCAGCCGCCCTCACTTTCTGGTTCCGGAAACGCTTCTGAGGGGAGCGGCAACCTCGCCGGCAGATGCGCG
TGACAAGCTTGCCCTGTCCGATCCATTGCCCGCAAAAGCAGCCGACGATGGCCCCCCCTCCCTCCTGTCGCTCGTTGTAC
CGTTCTATAACGAGGAGGAGATGATCGGGGCGTTTTTCAGCACGGTTATTCCCGTACTTGAAGCCATCGACGGAGTGCAG
TTCGAAATCGTCTGCGTCAATGACGGCAGCCGCGACGGCACGCTCCGCATGCTCATCAGCATGTCGGATCAAGATAGTCG
CATCCGTGTCATCGATCTGTCGCGCAACTTTGGGAAGGAAGCGGCGCTATCGGCCGGACTCGACGAAGCGCGCGGCGCCA
TTGTGATCCCTTTTGATGCCGATCTGCAGGACCCGCCCAGAGTCATTCCTTTACTCGTTGAAAAATGGCGCGAAGGCTAC
GATGTGGTCGTCGCCAAACGCGTCGACCGACTCACGGACTCCTTCCTGAAACGCCAGACGGCAGGCATCTTTTATCAGAT
CCACAACTCGGTGTGCGATACCAAGATTCCGGAAAACGTGGGTGATTTCCGGTTGATTACGAGGGAGGTCGTCGACGCGC
TCAAACGGCTCCCCGAAACGCGCCGCTTCATGAAGGGTCTGTTCGCCTGGGTAGGTTATCAGACTGCAGTTGTCGAATAT
GTGCGCGAACCCCGCCTTGCGGGCAGGTCGAAGTTCTCTGGCTGGAAACTGTGGAACTTCGCTCTGGAGGGCTTCACGAG
TTTCAGCACGCTGCCGCTTCGCGTATGGACGTACGTCGGCAGCTTCGTCGCGCTGGGCGCATTTCTGTATGCCTCATTCC
TCATCGTGCGAACCCTGATTCAAGGGGTCGCCGTACCGGGCTACGCATCGCTGATCTCGACCGTCCTCCTGCTCGGAGGG
GTTCAATTGATCGGCATCGGGGTGCTGGGTGAGTACATCGGCCGCATTTACTACGAGTCGAAGAACCGGCCGGTCTACCT
GATCCGCAGGCGCTATCAGACTGCAGGCGCCGACGATATCTGA

Upstream 100 bases:

>100_bases
TGCGGCAGGATCTGGACGGACATACCGCCGAAGCGACCCGCACAGAACGCTTGAGATCGTCACGTCAGTCGGACAACCGC
GGCATCTTCGCGAGGTAATC

Downstream 100 bases:

>100_bases
TCCGCTCATGGCACGCCGGTTGGCGTTCTATGCCAGTGCCGGTGCAACCGGTACCGATACCCCGTACTGAGCCCGTTCAT
CGACTTCCCATCGATAAGCT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MDYVSRPHFLVPETLLRGAATSPADARDKLALSDPLPAKAADDGPPSLLSLVVPFYNEEEMIGAFFSTVIPVLEAIDGVQ
FEIVCVNDGSRDGTLRMLISMSDQDSRIRVIDLSRNFGKEAALSAGLDEARGAIVIPFDADLQDPPRVIPLLVEKWREGY
DVVVAKRVDRLTDSFLKRQTAGIFYQIHNSVCDTKIPENVGDFRLITREVVDALKRLPETRRFMKGLFAWVGYQTAVVEY
VREPRLAGRSKFSGWKLWNFALEGFTSFSTLPLRVWTYVGSFVALGAFLYASFLIVRTLIQGVAVPGYASLISTVLLLGG
VQLIGIGVLGEYIGRIYYESKNRPVYLIRRRYQTAGADDI

Sequences:

>Translated_360_residues
MDYVSRPHFLVPETLLRGAATSPADARDKLALSDPLPAKAADDGPPSLLSLVVPFYNEEEMIGAFFSTVIPVLEAIDGVQ
FEIVCVNDGSRDGTLRMLISMSDQDSRIRVIDLSRNFGKEAALSAGLDEARGAIVIPFDADLQDPPRVIPLLVEKWREGY
DVVVAKRVDRLTDSFLKRQTAGIFYQIHNSVCDTKIPENVGDFRLITREVVDALKRLPETRRFMKGLFAWVGYQTAVVEY
VREPRLAGRSKFSGWKLWNFALEGFTSFSTLPLRVWTYVGSFVALGAFLYASFLIVRTLIQGVAVPGYASLISTVLLLGG
VQLIGIGVLGEYIGRIYYESKNRPVYLIRRRYQTAGADDI
>Mature_360_residues
MDYVSRPHFLVPETLLRGAATSPADARDKLALSDPLPAKAADDGPPSLLSLVVPFYNEEEMIGAFFSTVIPVLEAIDGVQ
FEIVCVNDGSRDGTLRMLISMSDQDSRIRVIDLSRNFGKEAALSAGLDEARGAIVIPFDADLQDPPRVIPLLVEKWREGY
DVVVAKRVDRLTDSFLKRQTAGIFYQIHNSVCDTKIPENVGDFRLITREVVDALKRLPETRRFMKGLFAWVGYQTAVVEY
VREPRLAGRSKFSGWKLWNFALEGFTSFSTLPLRVWTYVGSFVALGAFLYASFLIVRTLIQGVAVPGYASLISTVLLLGG
VQLIGIGVLGEYIGRIYYESKNRPVYLIRRRYQTAGADDI

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=302, Percent_Identity=55.6291390728477, Blast_Score=346, Evalue=2e-96,
Organism=Escherichia coli, GI1788588, Length=316, Percent_Identity=34.1772151898734, Blast_Score=168, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 40067; Mature: 40067

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYVSRPHFLVPETLLRGAATSPADARDKLALSDPLPAKAADDGPPSLLSLVVPFYNEEE
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCCHH
MIGAFFSTVIPVLEAIDGVQFEIVCVNDGSRDGTLRMLISMSDQDSRIRVIDLSRNFGKE
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCHH
AALSAGLDEARGAIVIPFDADLQDPPRVIPLLVEKWREGYDVVVAKRVDRLTDSFLKRQT
HHHHCCHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AGIFYQIHNSVCDTKIPENVGDFRLITREVVDALKRLPETRRFMKGLFAWVGYQTAVVEY
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
VREPRLAGRSKFSGWKLWNFALEGFTSFSTLPLRVWTYVGSFVALGAFLYASFLIVRTLI
HHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGVAVPGYASLISTVLLLGGVQLIGIGVLGEYIGRIYYESKNRPVYLIRRRYQTAGADDI
HHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCEEEEEEHHHCCCCCCC
>Mature Secondary Structure
MDYVSRPHFLVPETLLRGAATSPADARDKLALSDPLPAKAADDGPPSLLSLVVPFYNEEE
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCCHH
MIGAFFSTVIPVLEAIDGVQFEIVCVNDGSRDGTLRMLISMSDQDSRIRVIDLSRNFGKE
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCHH
AALSAGLDEARGAIVIPFDADLQDPPRVIPLLVEKWREGYDVVVAKRVDRLTDSFLKRQT
HHHHCCHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AGIFYQIHNSVCDTKIPENVGDFRLITREVVDALKRLPETRRFMKGLFAWVGYQTAVVEY
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
VREPRLAGRSKFSGWKLWNFALEGFTSFSTLPLRVWTYVGSFVALGAFLYASFLIVRTLI
HHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGVAVPGYASLISTVLLLGGVQLIGIGVLGEYIGRIYYESKNRPVYLIRRRYQTAGADDI
HHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCEEEEEEHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]