| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is boxA [H]
Identifier: 186476296
GI number: 186476296
Start: 1737474
End: 1738724
Strand: Reverse
Name: boxA [H]
Synonym: Bphy_1538
Alternate gene names: 186476296
Gene position: 1738724-1737474 (Counterclockwise)
Preceding gene: 186476297
Following gene: 186476294
Centisome position: 49.98
GC content: 62.83
Gene sequence:
>1251_bases ATGAACGCGCCTGTATCGATCGAAGTCCTCAAGCAGCATCTGATCGATCCGGAGATCTGCATTCGCTGCAACACATGCGA AGAGACCTGCCCGATCGATGCGATCCAGCACGACGACACGAACTACGTCGTGATGCCGGACGTCTGCAACGGTTGCATGG CGTGCGTGCCGCCGTGTCCGACGGGCGCGATCGACAACTGGCGCACCGTGCTGAAGGCCGACGCATGGAGCGTCGACGAA CAGTACACGTGGGACGTGTTGCCCGAACAGGGAACAATGGCATTGCCCGCGACAGCCGGGCCCGCGACCGGCGCCATGAC CGGCGGCAGTGATGGTGACGGTGAAGCACAGGGCATCGAGGTCGACACGGTGCGCGGTGCGGTGGTGCCACCGTGGTCCG CCGCGCGTCCGTATGTGAATCTCTACACACACAGGAACCCGACGAAGGCGACTGTCGTCGGCAACTACCGGCTGACAGAC GAAGGGACGGAAAGCGACATACATCACATCGTGCTCGATTTCGGCTCGCTGCCGTTTCCTGTGCTGGAAGGGCAGTCGAT CGGCATTCTGCCGCCGGGCAGCGCCGCCGATGGCCGCGCCCATCATGCGCGCCAGTATTCGATCGCCAGTCCGCGCGACG GCGAGCGGCCCGGCTACAACAACGTGTCGCTGACCGTGAAGCGCGTCACGCAGGACTATCGCGGCAATGCGGCGAGCGGC GTGTGCTCGAACTATCTGTGCGATCTGAAAAAGGGCGACGTAGTCAATGTGATCGGCCCGTTCGGCAGCACGTTCCTGAT GCCCAATCATCCGGATTCGCATCTGCTGATGATCTGCACGGGCACGGGGTCCGCGCCGATGCGCGCGATGACCGAGTATC GCCGGCGACGCAGGCTCAAGGGGGCGACGGGCAAACTGATGCTGTTCTTCGGTGCGCGCACGAAAGCAGAGCTGCCGTAC TTCGGTCCGCTGACGAATCTGCCGAAAGACTTCATCGACACGAATCTGGCGTTTTCGCGCACGCCCGGCGAACGGAAGCG CTACGTGCAGGACGCCATGCGCGAGCGTGCCGTCGATGTCGCGCAACTGCTTCGCGACGACGGCACGTACATCTACGTGT GCGGGTTGAAGGGCATGGAAGACGGGGTGCTGCAGTCGCTCAAGGACATTGCCGATCAGCATGGCCTCGAATGGAACGCG CTATGGCAGAGGCTCAAGCGCGAAGGACGTCTGCATCTGGAAACGTACTGA
Upstream 100 bases:
>100_bases CGCGATGGGCATCAACCGTCAGCCCGTCGATTTCGAATACGTGCGCTTCAACTGAGCATCGCGCGCGACGGCGAGGAAAA GCAGAGGCAGGGAGACATTC
Downstream 100 bases:
>100_bases ACGCGAGCGGGCGTTACGTCTTCGCAGCCGGCGATTTCGCCCCGCACGCGCGAATCACGAGTTGCACGACCTGATCCGTC GTTGCGTCGAAAGCCTTTTG
Product: benzoyl-CoA oxygenase/reductase, BoxA protein
Products: NA
Alternate protein names: Benzoyl-CoA 2,3-dioxygenase subunit A; Benzoyl-CoA dioxygenase reductase component [H]
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MNAPVSIEVLKQHLIDPEICIRCNTCEETCPIDAIQHDDTNYVVMPDVCNGCMACVPPCPTGAIDNWRTVLKADAWSVDE QYTWDVLPEQGTMALPATAGPATGAMTGGSDGDGEAQGIEVDTVRGAVVPPWSAARPYVNLYTHRNPTKATVVGNYRLTD EGTESDIHHIVLDFGSLPFPVLEGQSIGILPPGSAADGRAHHARQYSIASPRDGERPGYNNVSLTVKRVTQDYRGNAASG VCSNYLCDLKKGDVVNVIGPFGSTFLMPNHPDSHLLMICTGTGSAPMRAMTEYRRRRRLKGATGKLMLFFGARTKAELPY FGPLTNLPKDFIDTNLAFSRTPGERKRYVQDAMRERAVDVAQLLRDDGTYIYVCGLKGMEDGVLQSLKDIADQHGLEWNA LWQRLKREGRLHLETY
Sequences:
>Translated_416_residues MNAPVSIEVLKQHLIDPEICIRCNTCEETCPIDAIQHDDTNYVVMPDVCNGCMACVPPCPTGAIDNWRTVLKADAWSVDE QYTWDVLPEQGTMALPATAGPATGAMTGGSDGDGEAQGIEVDTVRGAVVPPWSAARPYVNLYTHRNPTKATVVGNYRLTD EGTESDIHHIVLDFGSLPFPVLEGQSIGILPPGSAADGRAHHARQYSIASPRDGERPGYNNVSLTVKRVTQDYRGNAASG VCSNYLCDLKKGDVVNVIGPFGSTFLMPNHPDSHLLMICTGTGSAPMRAMTEYRRRRRLKGATGKLMLFFGARTKAELPY FGPLTNLPKDFIDTNLAFSRTPGERKRYVQDAMRERAVDVAQLLRDDGTYIYVCGLKGMEDGVLQSLKDIADQHGLEWNA LWQRLKREGRLHLETY >Mature_416_residues MNAPVSIEVLKQHLIDPEICIRCNTCEETCPIDAIQHDDTNYVVMPDVCNGCMACVPPCPTGAIDNWRTVLKADAWSVDE QYTWDVLPEQGTMALPATAGPATGAMTGGSDGDGEAQGIEVDTVRGAVVPPWSAARPYVNLYTHRNPTKATVVGNYRLTD EGTESDIHHIVLDFGSLPFPVLEGQSIGILPPGSAADGRAHHARQYSIASPRDGERPGYNNVSLTVKRVTQDYRGNAASG VCSNYLCDLKKGDVVNVIGPFGSTFLMPNHPDSHLLMICTGTGSAPMRAMTEYRRRRRLKGATGKLMLFFGARTKAELPY FGPLTNLPKDFIDTNLAFSRTPGERKRYVQDAMRERAVDVAQLLRDDGTYIYVCGLKGMEDGVLQSLKDIADQHGLEWNA LWQRLKREGRLHLETY
Specific function: The BoxA/BoxB complex catalyzes the aerobic reduction/oxygenation of the aromatic ring of benzoyl-CoA to form 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. BoxA acts as a reductase that uses NADPH to reduce the oxygenase component BoxB. BoxAB does not act on NADH
COG id: COG0369
COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Homo sapiens, GI24041029, Length=196, Percent_Identity=31.6326530612245, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI10835173, Length=226, Percent_Identity=29.646017699115, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI40254422, Length=199, Percent_Identity=32.6633165829146, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1789123, Length=197, Percent_Identity=34.5177664974619, Blast_Score=81, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6321143, Length=225, Percent_Identity=31.1111111111111, Blast_Score=76, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6321832, Length=163, Percent_Identity=31.2883435582822, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24660907, Length=157, Percent_Identity=35.031847133758, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24660903, Length=157, Percent_Identity=35.031847133758, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24583543, Length=223, Percent_Identity=30.0448430493274, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI78706876, Length=223, Percent_Identity=30.0448430493274, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI78706872, Length=223, Percent_Identity=30.0448430493274, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017634 - InterPro: IPR017927 - InterPro: IPR001709 - InterPro: IPR012146 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00037 Fer4; PF00175 NAD_binding_1 [H]
EC number: =1.14.12.21 [H]
Molecular weight: Translated: 45698; Mature: 45698
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPVSIEVLKQHLIDPEICIRCNTCEETCPIDAIQHDDTNYVVMPDVCNGCMACVPPCP CCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCCCEEECCCHHCCCEECCCCCC TGAIDNWRTVLKADAWSVDEQYTWDVLPEQGTMALPATAGPATGAMTGGSDGDGEAQGIE CCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEE VDTVRGAVVPPWSAARPYVNLYTHRNPTKATVVGNYRLTDEGTESDIHHIVLDFGSLPFP EEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCHHHEEEEECCCCCCC VLEGQSIGILPPGSAADGRAHHARQYSIASPRDGERPGYNNVSLTVKRVTQDYRGNAASG EECCCEEEEECCCCCCCCCHHHHHEECCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCHHH VCSNYLCDLKKGDVVNVIGPFGSTFLMPNHPDSHLLMICTGTGSAPMRAMTEYRRRRRLK HHHHHHHCCCCCCEEEEECCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC GATGKLMLFFGARTKAELPYFGPLTNLPKDFIDTNLAFSRTPGERKRYVQDAMRERAVDV CCCCCEEEEECCCCCCCCCCCCCHHCCCHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHH AQLLRDDGTYIYVCGLKGMEDGVLQSLKDIADQHGLEWNALWQRLKREGRLHLETY HHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECC >Mature Secondary Structure MNAPVSIEVLKQHLIDPEICIRCNTCEETCPIDAIQHDDTNYVVMPDVCNGCMACVPPCP CCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCCCEEECCCHHCCCEECCCCCC TGAIDNWRTVLKADAWSVDEQYTWDVLPEQGTMALPATAGPATGAMTGGSDGDGEAQGIE CCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEE VDTVRGAVVPPWSAARPYVNLYTHRNPTKATVVGNYRLTDEGTESDIHHIVLDFGSLPFP EEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCHHHEEEEECCCCCCC VLEGQSIGILPPGSAADGRAHHARQYSIASPRDGERPGYNNVSLTVKRVTQDYRGNAASG EECCCEEEEECCCCCCCCCHHHHHEECCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCHHH VCSNYLCDLKKGDVVNVIGPFGSTFLMPNHPDSHLLMICTGTGSAPMRAMTEYRRRRRLK HHHHHHHCCCCCCEEEEECCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC GATGKLMLFFGARTKAELPYFGPLTNLPKDFIDTNLAFSRTPGERKRYVQDAMRERAVDV CCCCCEEEEECCCCCCCCCCCCCHHCCCHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHH AQLLRDDGTYIYVCGLKGMEDGVLQSLKDIADQHGLEWNALWQRLKREGRLHLETY HHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11222587; 12399500 [H]