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The map label for this gene is amaB [H]

Identifier: 186476294

GI number: 186476294

Start: 1735082

End: 1736359

Strand: Reverse

Name: amaB [H]

Synonym: Bphy_1536

Alternate gene names: 186476294

Gene position: 1736359-1735082 (Counterclockwise)

Preceding gene: 186476296

Following gene: 186476293

Centisome position: 49.91

GC content: 64.55

Gene sequence:

>1278_bases
ATGAATGCGGTAACCGAAGCGTTGAAACAAGGGCTCGATACGTCGATCACGGTCAACGGCAAGCGTCTGTGGGATAGCCT
GATGACGATGGCGAAGATCGGTGCGACGCAGAAGGGTGGCGTCTGCCGTCTCGCGCTCACCGATCTCGACAAGCAGGGGC
GCGACCTGATCGTCAGCTGGGCGAGGGACGCGGGCTGCGCGGTGAGTGTCGATCAGATGGGCAACGTGTTCATGCGGCGC
GCGGGCACGAACCCGAATGCGTTGCCCGTGGTGACGGGTTCGCACGCGGACTCGCAGCCGACGGGCGGCCGCTTCGACGG
CATCTACGGCGTGCTGGGCGGCCTCGAAGTGATCCGCAGCCTGAACGACCGCAAGATCGAAACGGAGCATCCCGTCGAAG
TCGTGATCTGGACCAACGAGGAAGGCTCGCGCTTCGCGCCCGCGATGGTGGCGTCGGGCGTGTTCGCGGGCGTGTTCACG
CTCGACTACGGGCTCTCGCGCAAGGATGTGGACGGCAAGACGATCGGCGAGGAACTCAAGCGCATTGGCTACGCAGGCGA
CGTGCCGTGCGGCGGCCGTCCGTTGCATGCGGCGTTCGAGTTGCACATCGAACAGGGGCCGATACTCGAAGCCGAGAACA
AGACGATCGGCGTCGTGACGGATGCGCAGGGGCAGCGCTGGTACGAAATCACGCTGACGGGTCAGGAAGCGCATGCGGGT
CCGACACCGATGCCGCGCCGCAAGGATGCGCTGCTCGGCGCGGCGCGCGTCGTCGACCTCGTGAACCGCATCGGCCTCGA
TCATGCGCCGCTCGCATGCGCGACGGTCGGCATGATGCAGGTGCATCCGAACTCGCGCAACGTGATTCCCGGGCGTGTGT
TTTTCACCGTCGATTTCCGTCATCCCGACGATGCCGTGCTTGCGAAGATGGACGCTGCGTTGCGCGACGGCGTCGCGAAG
ATCGCGGGCGGCATCGGTCTCGAAACGCAACTCGAACAGATCTTTTACTATGCGCCCGTCAAATTCGACGAGGCGTGCGT
GAAGTCCGTGCGTGCCGCCGCCGAGCGTTTCGGTTACGCGCATCGCGACATGGTGTCGGGTGCGGGACATGACGCGTGCT
ATCTGTCGCAGGTCGCGCCGACATCGATGGTGTTCGTGCCGTGCGTGGACGGTATCAGTCACAACGAAATCGAAGACGCG
ACCCCCGAGTGGATCGAGGCGGGCGCGAACGTGTTGCTGCACGCGATGCTCGAGCGTGCCTGCGAACCCGCATCGTAA

Upstream 100 bases:

>100_bases
CCCAAAGCGAACCCGATGCACCCGTTTCACGTCGTCGCGAGAAGCGCCAACTCACTCGCGGTTGAACGGCAAAGCGTGTT
GATCGAGAGGAGCAAGACGA

Downstream 100 bases:

>100_bases
GCACTCGAAGACACTTCGAGGCTTCAACGCTGCACCCCTGCAATACGGCGCCCCGGCTTCGTTCGAGCGAAGCCGGCAGG
CACGGCTACGTCCTCACTTC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MNAVTEALKQGLDTSITVNGKRLWDSLMTMAKIGATQKGGVCRLALTDLDKQGRDLIVSWARDAGCAVSVDQMGNVFMRR
AGTNPNALPVVTGSHADSQPTGGRFDGIYGVLGGLEVIRSLNDRKIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVFT
LDYGLSRKDVDGKTIGEELKRIGYAGDVPCGGRPLHAAFELHIEQGPILEAENKTIGVVTDAQGQRWYEITLTGQEAHAG
PTPMPRRKDALLGAARVVDLVNRIGLDHAPLACATVGMMQVHPNSRNVIPGRVFFTVDFRHPDDAVLAKMDAALRDGVAK
IAGGIGLETQLEQIFYYAPVKFDEACVKSVRAAAERFGYAHRDMVSGAGHDACYLSQVAPTSMVFVPCVDGISHNEIEDA
TPEWIEAGANVLLHAMLERACEPAS

Sequences:

>Translated_425_residues
MNAVTEALKQGLDTSITVNGKRLWDSLMTMAKIGATQKGGVCRLALTDLDKQGRDLIVSWARDAGCAVSVDQMGNVFMRR
AGTNPNALPVVTGSHADSQPTGGRFDGIYGVLGGLEVIRSLNDRKIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVFT
LDYGLSRKDVDGKTIGEELKRIGYAGDVPCGGRPLHAAFELHIEQGPILEAENKTIGVVTDAQGQRWYEITLTGQEAHAG
PTPMPRRKDALLGAARVVDLVNRIGLDHAPLACATVGMMQVHPNSRNVIPGRVFFTVDFRHPDDAVLAKMDAALRDGVAK
IAGGIGLETQLEQIFYYAPVKFDEACVKSVRAAAERFGYAHRDMVSGAGHDACYLSQVAPTSMVFVPCVDGISHNEIEDA
TPEWIEAGANVLLHAMLERACEPAS
>Mature_425_residues
MNAVTEALKQGLDTSITVNGKRLWDSLMTMAKIGATQKGGVCRLALTDLDKQGRDLIVSWARDAGCAVSVDQMGNVFMRR
AGTNPNALPVVTGSHADSQPTGGRFDGIYGVLGGLEVIRSLNDRKIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVFT
LDYGLSRKDVDGKTIGEELKRIGYAGDVPCGGRPLHAAFELHIEQGPILEAENKTIGVVTDAQGQRWYEITLTGQEAHAG
PTPMPRRKDALLGAARVVDLVNRIGLDHAPLACATVGMMQVHPNSRNVIPGRVFFTVDFRHPDDAVLAKMDAALRDGVAK
IAGGIGLETQLEQIFYYAPVKFDEACVKSVRAAAERFGYAHRDMVSGAGHDACYLSQVAPTSMVFVPCVDGISHNEIEDA
TPEWIEAGANVLLHAMLERACEPAS

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=380, Percent_Identity=33.1578947368421, Blast_Score=185, Evalue=5e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 45632; Mature: 45632

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVTEALKQGLDTSITVNGKRLWDSLMTMAKIGATQKGGVCRLALTDLDKQGRDLIVSW
CCHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEE
ARDAGCAVSVDQMGNVFMRRAGTNPNALPVVTGSHADSQPTGGRFDGIYGVLGGLEVIRS
CCCCCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
LNDRKIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVFTLDYGLSRKDVDGKTIGEELK
CCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
RIGYAGDVPCGGRPLHAAFELHIEQGPILEAENKTIGVVTDAQGQRWYEITLTGQEAHAG
HCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCEEEEEECCCCCEEEEEEEECCCCCCC
PTPMPRRKDALLGAARVVDLVNRIGLDHAPLACATVGMMQVHPNSRNVIPGRVFFTVDFR
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCEEEECCCCCCCCCCEEEEEEECC
HPDDAVLAKMDAALRDGVAKIAGGIGLETQLEQIFYYAPVKFDEACVKSVRAAAERFGYA
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCH
HRDMVSGAGHDACYLSQVAPTSMVFVPCVDGISHNEIEDATPEWIEAGANVLLHAMLERA
HHHHHCCCCCCCEEHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
CEPAS
CCCCC
>Mature Secondary Structure
MNAVTEALKQGLDTSITVNGKRLWDSLMTMAKIGATQKGGVCRLALTDLDKQGRDLIVSW
CCHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEE
ARDAGCAVSVDQMGNVFMRRAGTNPNALPVVTGSHADSQPTGGRFDGIYGVLGGLEVIRS
CCCCCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
LNDRKIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVFTLDYGLSRKDVDGKTIGEELK
CCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
RIGYAGDVPCGGRPLHAAFELHIEQGPILEAENKTIGVVTDAQGQRWYEITLTGQEAHAG
HCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCEEEEEECCCCCEEEEEEEECCCCCCC
PTPMPRRKDALLGAARVVDLVNRIGLDHAPLACATVGMMQVHPNSRNVIPGRVFFTVDFR
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCEEEECCCCCCCCCCEEEEEEECC
HPDDAVLAKMDAALRDGVAKIAGGIGLETQLEQIFYYAPVKFDEACVKSVRAAAERFGYA
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCH
HRDMVSGAGHDACYLSQVAPTSMVFVPCVDGISHNEIEDATPEWIEAGANVLLHAMLERA
HHHHHCCCCCCCEEHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
CEPAS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]