| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yeiT [H]
Identifier: 186476293
GI number: 186476293
Start: 1733617
End: 1734966
Strand: Reverse
Name: yeiT [H]
Synonym: Bphy_1535
Alternate gene names: 186476293
Gene position: 1734966-1733617 (Counterclockwise)
Preceding gene: 186476294
Following gene: 186476292
Centisome position: 49.87
GC content: 66.52
Gene sequence:
>1350_bases ATGGCCATCAAGCAAACAGGCGACATCGCCGCGCATCGTCTGTCGCCCGACCAGCTTTCGTGTGAATTCGCCGACATTGC GCCGCTGCTCGATTCCACCGCAGCGGCCGCTGCCGCGAGCCGCTGTCACTACTGCTATGACGCGCCTTGCGTGCAGGCCT GTCCCACGCAAATCGACATCCCCAGCTTCATCCGCAAGATTGGCAACGGCAATCTGAAGGGCGCCGCAACCGACATCCTG TCCGCGAACCCATTGGGCGGCATGTGTTCGCGTGTCTGCCCGACGGAGATTCTTTGCGAAGGCGCATGCGTGCGCAATCA TCAGGACGCACAGCCCGTCGCGATCGGCGCGTTGCAGCGTCATGCGACGGATTGGGCGATGGCGCACGATGCCGTGCAGT GGCAGCGTGCGCCCGACAGCGGACGTCATGTCGCCGTCGTCGGCGCGGGACCGGCGGGGCTCGCCTGTGCGCATCGCCTG GCGGTGGCGGGGCATCGCGTGACGATTTACGACGCCCGCGACAAGGGCGGCGGACTCAACGAATATGGCATCGCCGCGTA CAAGACGGTCGACGGCTTCGCGCAGCGCGAAGTGCAATGGCTGCTGGCGGTGGGCGGGATCGACCTGAAAACAGGTGTTG CGCTCGGCCGTGACGTGACGCTCGATGCGCTGCGCCAGCAGCACGATGCCGTGTTTCTCGCGCTCGGTCTGACGGGCGTG CGCGCGCTCGAACTCGATGGGGAAGCGTTGGGCGGCGTGCTTGACGCCGTCGATTTCATCGAGCAGGTGCGTGAGGCGTC AGACCTCGCGACGGTTGCCGTTGGCCGCCGCGTGGTAGTGATCGGCGGCGGCAATACGGCTATCGATGCCGCGGTGCAAA GCCGCAAACTCGGCGCGACGAGCGTGACGATGGTGTACCGGCGCGGTGTCGAATCGATGAGCGCGACCTGGACCGAGCGC GAATTCGCGCAGACGCAGGGCGTGACGCTCGTCACGCATGCGAAGCCCGTGCGATTGATAGGCACCGACGGCATGGTGAG CGCAGTCGAATTCGAACGCACTGCTCGCGATGGCGCCACGGAGCGCTTCACGCTCGAGGCCGACATGGTGCTCAAGGCCA TCGGCCAGACGCTGGTCGCCGTCGGCCTCGATCGCGCGCTGCTGACGTTCGATCAACACCGCATCGCAGTCGACGCGGAC ATGCGCACGTCACTGGACAACGTGTGGGCGGGCGGCGATTGCGCGGCGTCGGGCGGCATCGACCTGACCGTGCAAGCGGT GCAGGACGGCAAGCTCGCAGCGGCATCGATCGACGCGGCGTTCGCATTGGCCGCAGTGAAGGCGGCCTGA
Upstream 100 bases:
>100_bases TCGAGGCTTCAACGCTGCACCCCTGCAATACGGCGCCCCGGCTTCGTTCGAGCGAAGCCGGCAGGCACGGCTACGTCCTC ACTTCGTCGAAGGAAAGTAT
Downstream 100 bases:
>100_bases ACGCGCCGCCCGATATCCAAGGATAAAACCGAACCCCACGGAGCCGAACATGGCCGATCTACGCTGCACGATAGCCGGCA TCACGTCGCCGAATCCTTTC
Product: putative oxidoreductase
Products: L-glutamine; 2-oxoglutarate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MAIKQTGDIAAHRLSPDQLSCEFADIAPLLDSTAAAAAASRCHYCYDAPCVQACPTQIDIPSFIRKIGNGNLKGAATDIL SANPLGGMCSRVCPTEILCEGACVRNHQDAQPVAIGALQRHATDWAMAHDAVQWQRAPDSGRHVAVVGAGPAGLACAHRL AVAGHRVTIYDARDKGGGLNEYGIAAYKTVDGFAQREVQWLLAVGGIDLKTGVALGRDVTLDALRQQHDAVFLALGLTGV RALELDGEALGGVLDAVDFIEQVREASDLATVAVGRRVVVIGGGNTAIDAAVQSRKLGATSVTMVYRRGVESMSATWTER EFAQTQGVTLVTHAKPVRLIGTDGMVSAVEFERTARDGATERFTLEADMVLKAIGQTLVAVGLDRALLTFDQHRIAVDAD MRTSLDNVWAGGDCAASGGIDLTVQAVQDGKLAAASIDAAFALAAVKAA
Sequences:
>Translated_449_residues MAIKQTGDIAAHRLSPDQLSCEFADIAPLLDSTAAAAAASRCHYCYDAPCVQACPTQIDIPSFIRKIGNGNLKGAATDIL SANPLGGMCSRVCPTEILCEGACVRNHQDAQPVAIGALQRHATDWAMAHDAVQWQRAPDSGRHVAVVGAGPAGLACAHRL AVAGHRVTIYDARDKGGGLNEYGIAAYKTVDGFAQREVQWLLAVGGIDLKTGVALGRDVTLDALRQQHDAVFLALGLTGV RALELDGEALGGVLDAVDFIEQVREASDLATVAVGRRVVVIGGGNTAIDAAVQSRKLGATSVTMVYRRGVESMSATWTER EFAQTQGVTLVTHAKPVRLIGTDGMVSAVEFERTARDGATERFTLEADMVLKAIGQTLVAVGLDRALLTFDQHRIAVDAD MRTSLDNVWAGGDCAASGGIDLTVQAVQDGKLAAASIDAAFALAAVKAA >Mature_448_residues AIKQTGDIAAHRLSPDQLSCEFADIAPLLDSTAAAAAASRCHYCYDAPCVQACPTQIDIPSFIRKIGNGNLKGAATDILS ANPLGGMCSRVCPTEILCEGACVRNHQDAQPVAIGALQRHATDWAMAHDAVQWQRAPDSGRHVAVVGAGPAGLACAHRLA VAGHRVTIYDARDKGGGLNEYGIAAYKTVDGFAQREVQWLLAVGGIDLKTGVALGRDVTLDALRQQHDAVFLALGLTGVR ALELDGEALGGVLDAVDFIEQVREASDLATVAVGRRVVVIGGGNTAIDAAVQSRKLGATSVTMVYRRGVESMSATWTERE FAQTQGVTLVTHAKPVRLIGTDGMVSAVEFERTARDGATERFTLEADMVLKAIGQTLVAVGLDRALLTFDQHRIAVDADM RTSLDNVWAGGDCAASGGIDLTVQAVQDGKLAAASIDAAFALAAVKAA
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli glutamate synthase [NADPH] small chain (GltD) and to E.coli AegA [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=459, Percent_Identity=31.5904139433551, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI237757300, Length=120, Percent_Identity=44.1666666666667, Blast_Score=90, Evalue=5e-18, Organism=Escherichia coli, GI87082180, Length=466, Percent_Identity=33.4763948497854, Blast_Score=195, Evalue=5e-51, Organism=Escherichia coli, GI1788468, Length=414, Percent_Identity=33.8164251207729, Blast_Score=194, Evalue=7e-51, Organism=Escherichia coli, GI1788811, Length=479, Percent_Identity=32.5678496868476, Blast_Score=183, Evalue=3e-47, Organism=Escherichia coli, GI1789606, Length=449, Percent_Identity=33.184855233853, Blast_Score=182, Evalue=3e-47, Organism=Escherichia coli, GI1789243, Length=415, Percent_Identity=29.6385542168675, Blast_Score=112, Evalue=5e-26, Organism=Caenorhabditis elegans, GI71984108, Length=452, Percent_Identity=32.7433628318584, Blast_Score=191, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17570289, Length=458, Percent_Identity=26.2008733624454, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17543860, Length=167, Percent_Identity=32.3353293413174, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320030, Length=448, Percent_Identity=30.5803571428571, Blast_Score=141, Evalue=2e-34, Organism=Drosophila melanogaster, GI24640763, Length=449, Percent_Identity=35.4120267260579, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI18858217, Length=449, Percent_Identity=35.4120267260579, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI28574881, Length=446, Percent_Identity=29.5964125560538, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI24665539, Length=446, Percent_Identity=29.5964125560538, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI24665547, Length=446, Percent_Identity=29.5964125560538, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24665543, Length=446, Percent_Identity=29.5964125560538, Blast_Score=140, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR009051 - InterPro: IPR016040 - InterPro: IPR001327 - InterPro: IPR000103 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.4.1.13
Molecular weight: Translated: 46932; Mature: 46801
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKQTGDIAAHRLSPDQLSCEFADIAPLLDSTAAAAAASRCHYCYDAPCVQACPTQIDI CCCCCCCCCHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCH PSFIRKIGNGNLKGAATDILSANPLGGMCSRVCPTEILCEGACVRNHQDAQPVAIGALQR HHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHCCCHHHHHCCCHHCCCCCCCCHHHHHHHH HATDWAMAHDAVQWQRAPDSGRHVAVVGAGPAGLACAHRLAVAGHRVTIYDARDKGGGLN HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC EYGIAAYKTVDGFAQREVQWLLAVGGIDLKTGVALGRDVTLDALRQQHDAVFLALGLTGV CCCEEEEEHHHHHHHHHHEEEEEECCCEECCCCCCCCCCCHHHHHHHCCEEEEEECCCCE RALELDGEALGGVLDAVDFIEQVREASDLATVAVGRRVVVIGGGNTAIDAAVQSRKLGAT EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCHHHHHHHHHCCCCCH SVTMVYRRGVESMSATWTEREFAQTQGVTLVTHAKPVRLIGTDGMVSAVEFERTARDGAT HHHHHHHHCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCEEHHHHHHHHCCCCC ERFTLEADMVLKAIGQTLVAVGLDRALLTFDQHRIAVDADMRTSLDNVWAGGDCAASGGI EEEEEHHHHHHHHHHHHHHHHHCCHHHEEECCCEEEECCHHHHCHHHCCCCCCCCCCCCC DLTVQAVQDGKLAAASIDAAFALAAVKAA EEEEEEECCCCEEEHHHHHHHHHHHHHCC >Mature Secondary Structure AIKQTGDIAAHRLSPDQLSCEFADIAPLLDSTAAAAAASRCHYCYDAPCVQACPTQIDI CCCCCCCCHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCH PSFIRKIGNGNLKGAATDILSANPLGGMCSRVCPTEILCEGACVRNHQDAQPVAIGALQR HHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHCCCHHHHHCCCHHCCCCCCCCHHHHHHHH HATDWAMAHDAVQWQRAPDSGRHVAVVGAGPAGLACAHRLAVAGHRVTIYDARDKGGGLN HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC EYGIAAYKTVDGFAQREVQWLLAVGGIDLKTGVALGRDVTLDALRQQHDAVFLALGLTGV CCCEEEEEHHHHHHHHHHEEEEEECCCEECCCCCCCCCCCHHHHHHHCCEEEEEECCCCE RALELDGEALGGVLDAVDFIEQVREASDLATVAVGRRVVVIGGGNTAIDAAVQSRKLGAT EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCHHHHHHHHHCCCCCH SVTMVYRRGVESMSATWTEREFAQTQGVTLVTHAKPVRLIGTDGMVSAVEFERTARDGAT HHHHHHHHCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCEEHHHHHHHHCCCCC ERFTLEADMVLKAIGQTLVAVGLDRALLTFDQHRIAVDADMRTSLDNVWAGGDCAASGGI EEEEEHHHHHHHHHHHHHHHHHCCHHHEEECCCEEEECCHHHHCHHHCCCCCCCCCCCCC DLTVQAVQDGKLAAASIDAAFALAAVKAA EEEEEEECCCCEEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamate; NADP+
Specific reaction: 2 L-glutamate + NADP+ = L-glutamine + 2-oxoglutarate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]