Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yheS [H]

Identifier: 186476113

GI number: 186476113

Start: 1521523

End: 1523463

Strand: Direct

Name: yheS [H]

Synonym: Bphy_1355

Alternate gene names: 186476113

Gene position: 1521523-1523463 (Clockwise)

Preceding gene: 186476111

Following gene: 186476114

Centisome position: 43.73

GC content: 64.5

Gene sequence:

>1941_bases
GTGATCCGCTTCAATCAGTTCAGTCTCGCGCGCGGCACGAAACCGCTTTTCGAACAGACCACGTTCGCGCTGAATCCTGG
CGAAAAAGCCGGCCTCGTCGGTGCCAACGGCGCGGGTAAATCGACGCTGTTCTCCGTCCTGCTCGGCGATCTGCACGCCG
ACGGCGGCGACGTTGCGATGCCGCCGTCGTGGCAGGTCGCGCATGTCGCGCAGGAAACGCCCGCCGTCGACAAGACCGCA
CTCGAGTACACACTCGACGGCGACGCCGCGCTGCGCGCCATCGAAGCCCGCATCGCAGCCGCCTCCGCCGCGCACGACGG
TGCGGCCGAAGCGGAGGCGCACGCCGCCTTCGCCGATGCCGACGGCTACACGGCCCCCGCTCGCGCCGAAGCGCTGCTGC
TCGGCCTCGGTTTCACGCTCGACCAGACGCGTGCGGGCGTCGGCAGTTTTTCGGGCGGCTGGCGCATGCGCCTGAATCTC
GCGCAGGCGCTGATGTGCCGTTCGGACCTGCTGCTGCTCGACGAGCCGACCAACCACCTGGATCTCGATGCCATCGTCTG
GCTCGAAGACTGGCTGCACCGTTATCCGGGCACGCTGATCGTGATTTCGCACGACCGCGAATTTCTCGATTCGGTCTGCA
ATGTTACGCTGCATCTCGAGAACCAGCAGATCAAACGATACGGCGGCAACTACTCGCAATTCGAAGTGCTGCGCGCGCAG
CAGCTCGCGCTGCAGCAGAGCGCATACGAAAAGCAGCGCAAGACCATTGAGCATCTGCAGAGCTTCGTCGACCGCTTCAA
GGCGAAGGCGACCAAGGCGCGCCAGGCGCAAAGCCGCATGAAAGCGCTCGAAAAAATGGAGCTGATCGCGCCCGCGCACA
TTGCGTCGCCGTTCACGTTCGAATTCCGCACGCCCGACTCCGCGCCGAATCCGATGATGGTGATGGAAGACGTGCGTTGC
GGTTATCACGGGGCGGACGGCAGCGAGCTTCCCATCGTCGAGCGCGTCGCGCTGTCCATCCAGAACGGGCAGCGCATCGG
CCTGCTCGGCGCGAACGGTCAAGGCAAGTCGACGCTGATCAAGACACTCGCGGGCACGCTGGCCCCGCTCAGCGGCCATG
TGCGCCAGGGCAAGGGCTTGCAGATCGGCTATTTCGCGCAGCATCAGTTGGAAACCCTTCGGCCCGACGACTCGCCGTTG
CAGCATCTGGCGCGCCTCGCACCCGACACGCGCGAACAGGAACTGCGCGACTTCCTCGGCAGCTTCAACTTTTCCGGCGA
CATGGCGACGGCCGCCATCGCGCCCTTCTCCGGCGGCGAGAAAGCACGTCTCGCACTCGCGCTGATCATCTGGCAGAAGC
CGAACCTGCTGCTGCTCGACGAACCGACCAACCACCTCGACCTCGAAACGCGCCACGCGCTGACAATGGCGCTCGCGCAG
TTCGAAGGCACGCTGATCCTCGTCTCGCATGACCGCCATTTGCTGCGCGCGACCACGGACCAGTTTATGCTCGTCGCGAA
GCACAAGCTGCAGCCGTTCGACGGCGATCTCGACGACTACCGCGACTGGCTGCTGCAGCATGCCGCCGAGCAGCGTGCGG
CGCTCAAGGCCGGCGACGCTTCGGCTGCGAACGACGGCGGCGCGGACGGAACGGTGAATCGCAAGGAGCAACGGCGGCTG
GAAGCGGAAACGCGCCAGAAGCTTTCACATCTGAAGAAGCCGCTGCAAACGCGCATTGCGAAGATCGACAAGGAAATGGA
CGCGCTGAACGCGGAAAAGGCGACGTTGGACGCGTTCGTCGCCGACCCTGCCAGCTACGCCGCGGAGCAAAAAACGAAGC
TGACGGAAGCGATACGCCGTCAGGCGGATGTCAACGCACGACTCGAAACGCTCGAAGCCGAATGGCTCGAAGCGCACGAG
GAACTCGAACAAATCGGCTAA

Upstream 100 bases:

>100_bases
TCTAATGGCTCCGCGGCCGCGCGCCACCTAGCCGATCGGCCAATGCCTGAGCGTGCGCCGCGCAGTCTAAAATAGCGTTT
TTCTTTCATCCGGCCTCGTT

Downstream 100 bases:

>100_bases
CGGCCCCTTCGCCACCGCGACGGAACCAACCGGGAAGCAAGGCCGCGCCAGCAATCGTGGAGGGCTGGGCATTGTCGTCT
ACTGCCGCACTGAAGGGCTT

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MIRFNQFSLARGTKPLFEQTTFALNPGEKAGLVGANGAGKSTLFSVLLGDLHADGGDVAMPPSWQVAHVAQETPAVDKTA
LEYTLDGDAALRAIEARIAAASAAHDGAAEAEAHAAFADADGYTAPARAEALLLGLGFTLDQTRAGVGSFSGGWRMRLNL
AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLIVISHDREFLDSVCNVTLHLENQQIKRYGGNYSQFEVLRAQ
QLALQQSAYEKQRKTIEHLQSFVDRFKAKATKARQAQSRMKALEKMELIAPAHIASPFTFEFRTPDSAPNPMMVMEDVRC
GYHGADGSELPIVERVALSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGHVRQGKGLQIGYFAQHQLETLRPDDSPL
QHLARLAPDTREQELRDFLGSFNFSGDMATAAIAPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ
FEGTLILVSHDRHLLRATTDQFMLVAKHKLQPFDGDLDDYRDWLLQHAAEQRAALKAGDASAANDGGADGTVNRKEQRRL
EAETRQKLSHLKKPLQTRIAKIDKEMDALNAEKATLDAFVADPASYAAEQKTKLTEAIRRQADVNARLETLEAEWLEAHE
ELEQIG

Sequences:

>Translated_646_residues
MIRFNQFSLARGTKPLFEQTTFALNPGEKAGLVGANGAGKSTLFSVLLGDLHADGGDVAMPPSWQVAHVAQETPAVDKTA
LEYTLDGDAALRAIEARIAAASAAHDGAAEAEAHAAFADADGYTAPARAEALLLGLGFTLDQTRAGVGSFSGGWRMRLNL
AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLIVISHDREFLDSVCNVTLHLENQQIKRYGGNYSQFEVLRAQ
QLALQQSAYEKQRKTIEHLQSFVDRFKAKATKARQAQSRMKALEKMELIAPAHIASPFTFEFRTPDSAPNPMMVMEDVRC
GYHGADGSELPIVERVALSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGHVRQGKGLQIGYFAQHQLETLRPDDSPL
QHLARLAPDTREQELRDFLGSFNFSGDMATAAIAPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ
FEGTLILVSHDRHLLRATTDQFMLVAKHKLQPFDGDLDDYRDWLLQHAAEQRAALKAGDASAANDGGADGTVNRKEQRRL
EAETRQKLSHLKKPLQTRIAKIDKEMDALNAEKATLDAFVADPASYAAEQKTKLTEAIRRQADVNARLETLEAEWLEAHE
ELEQIG
>Mature_646_residues
MIRFNQFSLARGTKPLFEQTTFALNPGEKAGLVGANGAGKSTLFSVLLGDLHADGGDVAMPPSWQVAHVAQETPAVDKTA
LEYTLDGDAALRAIEARIAAASAAHDGAAEAEAHAAFADADGYTAPARAEALLLGLGFTLDQTRAGVGSFSGGWRMRLNL
AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLIVISHDREFLDSVCNVTLHLENQQIKRYGGNYSQFEVLRAQ
QLALQQSAYEKQRKTIEHLQSFVDRFKAKATKARQAQSRMKALEKMELIAPAHIASPFTFEFRTPDSAPNPMMVMEDVRC
GYHGADGSELPIVERVALSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGHVRQGKGLQIGYFAQHQLETLRPDDSPL
QHLARLAPDTREQELRDFLGSFNFSGDMATAAIAPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ
FEGTLILVSHDRHLLRATTDQFMLVAKHKLQPFDGDLDDYRDWLLQHAAEQRAALKAGDASAANDGGADGTVNRKEQRRL
EAETRQKLSHLKKPLQTRIAKIDKEMDALNAEKATLDAFVADPASYAAEQKTKLTEAIRRQADVNARLETLEAEWLEAHE
ELEQIG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=534, Percent_Identity=38.7640449438202, Blast_Score=353, Evalue=2e-97,
Organism=Homo sapiens, GI10947137, Length=530, Percent_Identity=36.4150943396226, Blast_Score=323, Evalue=3e-88,
Organism=Homo sapiens, GI27881506, Length=530, Percent_Identity=36.4150943396226, Blast_Score=323, Evalue=3e-88,
Organism=Homo sapiens, GI10947135, Length=545, Percent_Identity=33.394495412844, Blast_Score=262, Evalue=7e-70,
Organism=Homo sapiens, GI69354671, Length=545, Percent_Identity=33.394495412844, Blast_Score=262, Evalue=9e-70,
Organism=Escherichia coli, GI1789751, Length=645, Percent_Identity=54.2635658914729, Blast_Score=699, Evalue=0.0,
Organism=Escherichia coli, GI1787041, Length=529, Percent_Identity=35.538752362949, Blast_Score=331, Evalue=8e-92,
Organism=Escherichia coli, GI2367384, Length=530, Percent_Identity=30.377358490566, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI1787182, Length=547, Percent_Identity=31.0786106032907, Blast_Score=210, Evalue=3e-55,
Organism=Escherichia coli, GI87081782, Length=568, Percent_Identity=25.8802816901408, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1788165, Length=182, Percent_Identity=33.5164835164835, Blast_Score=94, Evalue=4e-20,
Organism=Escherichia coli, GI1790190, Length=233, Percent_Identity=23.6051502145923, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787758, Length=196, Percent_Identity=25.5102040816327, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787164, Length=199, Percent_Identity=31.6582914572864, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788506, Length=199, Percent_Identity=25.6281407035176, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=532, Percent_Identity=35.5263157894737, Blast_Score=325, Evalue=4e-89,
Organism=Caenorhabditis elegans, GI17555318, Length=531, Percent_Identity=34.6516007532957, Blast_Score=317, Evalue=9e-87,
Organism=Caenorhabditis elegans, GI17559834, Length=558, Percent_Identity=31.5412186379928, Blast_Score=291, Evalue=7e-79,
Organism=Saccharomyces cerevisiae, GI6321121, Length=555, Percent_Identity=33.8738738738739, Blast_Score=325, Evalue=1e-89,
Organism=Saccharomyces cerevisiae, GI6320874, Length=537, Percent_Identity=31.8435754189944, Blast_Score=285, Evalue=1e-77,
Organism=Saccharomyces cerevisiae, GI6325030, Length=386, Percent_Identity=31.0880829015544, Blast_Score=162, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6324314, Length=404, Percent_Identity=28.7128712871287, Blast_Score=154, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6323278, Length=400, Percent_Identity=28, Blast_Score=147, Evalue=7e-36,
Organism=Drosophila melanogaster, GI24666836, Length=528, Percent_Identity=39.2045454545455, Blast_Score=378, Evalue=1e-105,
Organism=Drosophila melanogaster, GI24642252, Length=553, Percent_Identity=36.8896925858951, Blast_Score=343, Evalue=3e-94,
Organism=Drosophila melanogaster, GI18859989, Length=553, Percent_Identity=36.8896925858951, Blast_Score=343, Evalue=3e-94,
Organism=Drosophila melanogaster, GI24641342, Length=548, Percent_Identity=34.1240875912409, Blast_Score=308, Evalue=7e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 70923; Mature: 70923

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFNQFSLARGTKPLFEQTTFALNPGEKAGLVGANGAGKSTLFSVLLGDLHADGGDVAM
CCEECCCHHCCCCCHHHHCCEEEECCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC
PPSWQVAHVAQETPAVDKTALEYTLDGDAALRAIEARIAAASAAHDGAAEAEAHAAFADA
CCCCCHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECC
DGYTAPARAEALLLGLGFTLDQTRAGVGSFSGGWRMRLNLAQALMCRSDLLLLDEPTNHL
CCCCCCHHHHEEEEECCCCHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCEEEEECCCCCC
DLDAIVWLEDWLHRYPGTLIVISHDREFLDSVCNVTLHLENQQIKRYGGNYSQFEVLRAQ
CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEECCHHHHHHCCCHHHHHHHHHH
QLALQQSAYEKQRKTIEHLQSFVDRFKAKATKARQAQSRMKALEKMELIAPAHIASPFTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEE
EFRTPDSAPNPMMVMEDVRCGYHGADGSELPIVERVALSIQNGQRIGLLGANGQGKSTLI
EEECCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHH
KTLAGTLAPLSGHVRQGKGLQIGYFAQHQLETLRPDDSPLQHLARLAPDTREQELRDFLG
HHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH
SFNFSGDMATAAIAPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ
CCCCCCCCHHHEECCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHH
FEGTLILVSHDRHLLRATTDQFMLVAKHKLQPFDGDLDDYRDWLLQHAAEQRAALKAGDA
HCCEEEEEECCCHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
SAANDGGADGTVNRKEQRRLEAETRQKLSHLKKPLQTRIAKIDKEMDALNAEKATLDAFV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ADPASYAAEQKTKLTEAIRRQADVNARLETLEAEWLEAHEELEQIG
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRFNQFSLARGTKPLFEQTTFALNPGEKAGLVGANGAGKSTLFSVLLGDLHADGGDVAM
CCEECCCHHCCCCCHHHHCCEEEECCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC
PPSWQVAHVAQETPAVDKTALEYTLDGDAALRAIEARIAAASAAHDGAAEAEAHAAFADA
CCCCCHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECC
DGYTAPARAEALLLGLGFTLDQTRAGVGSFSGGWRMRLNLAQALMCRSDLLLLDEPTNHL
CCCCCCHHHHEEEEECCCCHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCEEEEECCCCCC
DLDAIVWLEDWLHRYPGTLIVISHDREFLDSVCNVTLHLENQQIKRYGGNYSQFEVLRAQ
CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEECCHHHHHHCCCHHHHHHHHHH
QLALQQSAYEKQRKTIEHLQSFVDRFKAKATKARQAQSRMKALEKMELIAPAHIASPFTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEE
EFRTPDSAPNPMMVMEDVRCGYHGADGSELPIVERVALSIQNGQRIGLLGANGQGKSTLI
EEECCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHH
KTLAGTLAPLSGHVRQGKGLQIGYFAQHQLETLRPDDSPLQHLARLAPDTREQELRDFLG
HHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH
SFNFSGDMATAAIAPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ
CCCCCCCCHHHEECCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHH
FEGTLILVSHDRHLLRATTDQFMLVAKHKLQPFDGDLDDYRDWLLQHAAEQRAALKAGDA
HCCEEEEEECCCHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
SAANDGGADGTVNRKEQRRLEAETRQKLSHLKKPLQTRIAKIDKEMDALNAEKATLDAFV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ADPASYAAEQKTKLTEAIRRQADVNARLETLEAEWLEAHEELEQIG
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]