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The map label for this gene is omp85 [H]

Identifier: 186476088

GI number: 186476088

Start: 1488315

End: 1490627

Strand: Reverse

Name: omp85 [H]

Synonym: Bphy_1330

Alternate gene names: 186476088

Gene position: 1490627-1488315 (Counterclockwise)

Preceding gene: 186476089

Following gene: 186476087

Centisome position: 42.84

GC content: 60.44

Gene sequence:

>2313_bases
TTGTTTAAACCTCATCGCTTTGTTCCAAAGACGGTTGTAGCCGCGGCATTCGCCGCGCATGGGCTGGTGGCCCACGCGAC
GACACCCTTCGTGGTGAAAGACATTCGGATCGAGGGGCTGCAACGGGTCGAACCCGGCACGGTGTTCTCCTACCTTCCCA
TCAAGCAAGGCGATACGTTTACCGACGAGAAAGCTTCCGAAGCCATCCGCGCGCTGTACGCAACGGGCTTCTTCAACGAC
GTGAAGATCGCCACGGAAGGCGACGTCGTGGTGGTGCAGGTGCTCGAGCGTCCCGCCATCGGCACGATTGATTTCTCGGG
TCTGCACGAATTCGAGAAGGACAATCTGGTCAAGGCGCTGCGCGCCGTCGGTCTGTCGCAAGGCCGCTATTACGACAAGG
CGCTTGTTGACAAGGCCGAGCAGGAACTGAAGCGCCAGTATCTGACGCGCGGTTTTTACGCAGCTGAAGTCACGACTACG
ATCACGCCGATCGATCGCAACCGTGTTGCGGTCCTGTTCGCCGTGATCGAAGGTCCGAGCGCGAAGATCCGCCAGATCAA
CTTCATCGGCAACAAGGCGTTCAGCACGGGTACGCTGCGCGACGAGATGCAGCTGTCCACACCGAACTGGTTCTCGTGGT
ACACGAAGAACGACCTGTATTCGAAAGAGAAGCTCACTGGCGACCTCGAGAACGTCCGCTCGTACTACCTGAATCGCGGC
TATCTCGAGTTCAACATCGAGTCGACCCAGGTGTCGATCACGCCGGACAAGAAGGACATGTACCTGACGGTGACGCTGCA
TGAAGGCGAGCCGTACACGATCAATAGCATCAAGCTGGCAGGCAATCTGCTCGACCGCGAAGCCGAGCTGAACAAGCTGA
TCAAAATCAAACCGGGCGACCGTTTTTCGGCGGAAAAGCTGCAGGCTACGACGAAGGCGATCGTCGACAAGCTCGGCGAA
TACGGCTATGCGTTCGCCACGGTGAATGCGCTGCCGCAGATCGATCAGGAGCATCACAAGGTCGACCTCACGCTGCAGGT
CGATCCGAGCCGCCGCGTGTACGTGCGGCGCATCAATGTGGTCGGCAACACGCGTACGCGCGACGAAGTGGTGCGTCGCG
AAATGCGCCAGCTCGAAAGCTCGTGGTTCGATTCGAACCGCCTCGCGCTGTCGAAGGACCGTATCAACCGTCTCGGCTAC
TTCACCGACGTCGATGTGACGACTGTGCCCGTCGAAGGCACGCCGGACCAGGTGGACGTCGACGTCAAGGTCGCTGAAAA
GCCGACGGGCGCCATCACACTGGGCGCCGGCTTCTCGTCGACGGACAAGGTGGTGCTGTCGGCGGGTGTGTCGCAGGACA
ACGTGTTCGGTTCGGGCACGAGTCTGTCGGTGAACGTGAACACCGCGAAAACCTACCGTACGTTGACTGTCACACAGGTT
GACCCGTACTTCACGGTCGACGGTATCAAGCGCATCACGGACGTCTACTACCGCACCTATGAGCCGCTGTACTACTCGAC
GGACTCGAGCTTCCGCATTGTCACGATGGGTGGCGACCTGAAGTTCGGCATTCCGTTCTCGGAAGTGGACACGGTGTACT
TCGGTGCCGGCTTCGAGCAGAACACGCTCGACGTCGACGCGAACACGCCGCAGGCCTACAAGAACTACGTTCAGGACTTC
GGCCGCGTGTCGAACAACGTGCCGCTGACGGTTGGCTGGTCGCGCGACGCGCGTGACAGCGCGCTGGTGCCGAGCCGCGG
CTACTTCACGCAGGCGAACGCCGAATACGGCACGCCGATCGGCGGCACCGAGTATTACAAGGCGGACTTGCAGGCGCAGT
ACTATTACTCGTTCTCGCGCGGCTTCGTAATCGGCTTCAACGTGCAGGGCGGCTACGGCAACGGCATCGGCAACGCGTAC
CCGATCTTCAAGAACTACTACGCGGGCGGTATCGGTTCGGTCCGCGGCTATGAACCCAGTTCGCTGGGTCCGCGCGACAA
GGTCACGAACGACCCGATCGGCGGCAACAAGATGTTCGTGACGAACGTCGAACTGACGTTCCCGCTGCCAGGCACGGGTT
ATGACCGCACGCTGCGTGTGTTCACGTTCCTCGACGCCGGTAACGTCTGGGGTGATTCACGTCAGGGCGGCGACACGACG
GTCGGCTCGAACGGCCTGCGCTACGGTTACGGTGTGGGTCTCGCGTGGATTTCGCCGATCGGGCCGCTCAAGCTGTCGCT
GGGCTTCCCGCTCCAGAAACACACGGGTGACCAGTATCAGAAGTTCCAGTTCCAGATCGGTACCGCGTTCTGA

Upstream 100 bases:

>100_bases
TGTTCAACGATCTTGCTCGTTTAATCCATTTTTAAAGTGTCTGGCGGCGTACGATGACGCCCGCCTGACCTGATGCAGCT
ATACACACTGGGGAAGCACG

Downstream 100 bases:

>100_bases
TCTCGCGCACCGGAACTGGAACCCTTTACAGCATCGAGAGGATGACTTTGCTAACTGGTATGTTTTCGAAACGTGCGGCG
TGTGCGATGGCGCTGGCCAT

Product: outer membrane protein assembly complex, YaeT protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 770; Mature: 770

Protein sequence:

>770_residues
MFKPHRFVPKTVVAAAFAAHGLVAHATTPFVVKDIRIEGLQRVEPGTVFSYLPIKQGDTFTDEKASEAIRALYATGFFND
VKIATEGDVVVVQVLERPAIGTIDFSGLHEFEKDNLVKALRAVGLSQGRYYDKALVDKAEQELKRQYLTRGFYAAEVTTT
ITPIDRNRVAVLFAVIEGPSAKIRQINFIGNKAFSTGTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLENVRSYYLNRG
YLEFNIESTQVSITPDKKDMYLTVTLHEGEPYTINSIKLAGNLLDREAELNKLIKIKPGDRFSAEKLQATTKAIVDKLGE
YGYAFATVNALPQIDQEHHKVDLTLQVDPSRRVYVRRINVVGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRINRLGY
FTDVDVTTVPVEGTPDQVDVDVKVAEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKTYRTLTVTQV
DPYFTVDGIKRITDVYYRTYEPLYYSTDSSFRIVTMGGDLKFGIPFSEVDTVYFGAGFEQNTLDVDANTPQAYKNYVQDF
GRVSNNVPLTVGWSRDARDSALVPSRGYFTQANAEYGTPIGGTEYYKADLQAQYYYSFSRGFVIGFNVQGGYGNGIGNAY
PIFKNYYAGGIGSVRGYEPSSLGPRDKVTNDPIGGNKMFVTNVELTFPLPGTGYDRTLRVFTFLDAGNVWGDSRQGGDTT
VGSNGLRYGYGVGLAWISPIGPLKLSLGFPLQKHTGDQYQKFQFQIGTAF

Sequences:

>Translated_770_residues
MFKPHRFVPKTVVAAAFAAHGLVAHATTPFVVKDIRIEGLQRVEPGTVFSYLPIKQGDTFTDEKASEAIRALYATGFFND
VKIATEGDVVVVQVLERPAIGTIDFSGLHEFEKDNLVKALRAVGLSQGRYYDKALVDKAEQELKRQYLTRGFYAAEVTTT
ITPIDRNRVAVLFAVIEGPSAKIRQINFIGNKAFSTGTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLENVRSYYLNRG
YLEFNIESTQVSITPDKKDMYLTVTLHEGEPYTINSIKLAGNLLDREAELNKLIKIKPGDRFSAEKLQATTKAIVDKLGE
YGYAFATVNALPQIDQEHHKVDLTLQVDPSRRVYVRRINVVGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRINRLGY
FTDVDVTTVPVEGTPDQVDVDVKVAEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKTYRTLTVTQV
DPYFTVDGIKRITDVYYRTYEPLYYSTDSSFRIVTMGGDLKFGIPFSEVDTVYFGAGFEQNTLDVDANTPQAYKNYVQDF
GRVSNNVPLTVGWSRDARDSALVPSRGYFTQANAEYGTPIGGTEYYKADLQAQYYYSFSRGFVIGFNVQGGYGNGIGNAY
PIFKNYYAGGIGSVRGYEPSSLGPRDKVTNDPIGGNKMFVTNVELTFPLPGTGYDRTLRVFTFLDAGNVWGDSRQGGDTT
VGSNGLRYGYGVGLAWISPIGPLKLSLGFPLQKHTGDQYQKFQFQIGTAF
>Mature_770_residues
MFKPHRFVPKTVVAAAFAAHGLVAHATTPFVVKDIRIEGLQRVEPGTVFSYLPIKQGDTFTDEKASEAIRALYATGFFND
VKIATEGDVVVVQVLERPAIGTIDFSGLHEFEKDNLVKALRAVGLSQGRYYDKALVDKAEQELKRQYLTRGFYAAEVTTT
ITPIDRNRVAVLFAVIEGPSAKIRQINFIGNKAFSTGTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLENVRSYYLNRG
YLEFNIESTQVSITPDKKDMYLTVTLHEGEPYTINSIKLAGNLLDREAELNKLIKIKPGDRFSAEKLQATTKAIVDKLGE
YGYAFATVNALPQIDQEHHKVDLTLQVDPSRRVYVRRINVVGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRINRLGY
FTDVDVTTVPVEGTPDQVDVDVKVAEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKTYRTLTVTQV
DPYFTVDGIKRITDVYYRTYEPLYYSTDSSFRIVTMGGDLKFGIPFSEVDTVYFGAGFEQNTLDVDANTPQAYKNYVQDF
GRVSNNVPLTVGWSRDARDSALVPSRGYFTQANAEYGTPIGGTEYYKADLQAQYYYSFSRGFVIGFNVQGGYGNGIGNAY
PIFKNYYAGGIGSVRGYEPSSLGPRDKVTNDPIGGNKMFVTNVELTFPLPGTGYDRTLRVFTFLDAGNVWGDSRQGGDTT
VGSNGLRYGYGVGLAWISPIGPLKLSLGFPLQKHTGDQYQKFQFQIGTAF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=814, Percent_Identity=36.1179361179361, Blast_Score=487, Evalue=1e-138,
Organism=Drosophila melanogaster, GI45552629, Length=451, Percent_Identity=22.8381374722838, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 85572; Mature: 85572

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPHRFVPKTVVAAAFAAHGLVAHATTPFVVKDIRIEGLQRVEPGTVFSYLPIKQGDTF
CCCCCCCCHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCC
TDEKASEAIRALYATGFFNDVKIATEGDVVVVQVLERPAIGTIDFSGLHEFEKDNLVKAL
CCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHH
RAVGLSQGRYYDKALVDKAEQELKRQYLTRGFYAAEVTTTITPIDRNRVAVLFAVIEGPS
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCEEEEEEEECCCC
AKIRQINFIGNKAFSTGTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLENVRSYYLNRG
CCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEECCCCCCHHHHCCCHHHHHHHHHCCC
YLEFNIESTQVSITPDKKDMYLTVTLHEGEPYTINSIKLAGNLLDREAELNKLIKIKPGD
EEEEEEECEEEEECCCCCCEEEEEEEECCCCEEEEEEEEECHHHCCHHCCCCEEEECCCC
RFSAEKLQATTKAIVDKLGEYGYAFATVNALPQIDQEHHKVDLTLQVDPSRRVYVRRINV
CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEEE
VGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRINRLGYFTDVDVTTVPVEGTPDQVDV
ECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCEEECCEEEEECCCCCCCEEE
DVKVAEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKTYRTLTVTQV
EEEEECCCCCEEEECCCCCCCCCEEEEECCCCCCEECCCCEEEEEECCCEEEEEEEEEEE
DPYFTVDGIKRITDVYYRTYEPLYYSTDSSFRIVTMGGDLKFGIPFSEVDTVYFGAGFEQ
CCEEEHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCEEECCCHHHCCEEEEECCCCC
NTLDVDANTPQAYKNYVQDFGRVSNNVPLTVGWSRDARDSALVPSRGYFTQANAEYGTPI
CEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCC
GGTEYYKADLQAQYYYSFSRGFVIGFNVQGGYGNGIGNAYPIFKNYYAGGIGSVRGYEPS
CCCCEEEECCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
SLGPRDKVTNDPIGGNKMFVTNVELTFPLPGTGYDRTLRVFTFLDAGNVWGDSRQGGDTT
CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC
VGSNGLRYGYGVGLAWISPIGPLKLSLGFPLQKHTGDQYQKFQFQIGTAF
CCCCCCEEEECCCCCEECCCCCEEEEECCCHHHCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MFKPHRFVPKTVVAAAFAAHGLVAHATTPFVVKDIRIEGLQRVEPGTVFSYLPIKQGDTF
CCCCCCCCHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCC
TDEKASEAIRALYATGFFNDVKIATEGDVVVVQVLERPAIGTIDFSGLHEFEKDNLVKAL
CCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHH
RAVGLSQGRYYDKALVDKAEQELKRQYLTRGFYAAEVTTTITPIDRNRVAVLFAVIEGPS
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCEEEEEEEECCCC
AKIRQINFIGNKAFSTGTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLENVRSYYLNRG
CCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEECCCCCCHHHHCCCHHHHHHHHHCCC
YLEFNIESTQVSITPDKKDMYLTVTLHEGEPYTINSIKLAGNLLDREAELNKLIKIKPGD
EEEEEEECEEEEECCCCCCEEEEEEEECCCCEEEEEEEEECHHHCCHHCCCCEEEECCCC
RFSAEKLQATTKAIVDKLGEYGYAFATVNALPQIDQEHHKVDLTLQVDPSRRVYVRRINV
CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEEE
VGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRINRLGYFTDVDVTTVPVEGTPDQVDV
ECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCEEECCEEEEECCCCCCCEEE
DVKVAEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKTYRTLTVTQV
EEEEECCCCCEEEECCCCCCCCCEEEEECCCCCCEECCCCEEEEEECCCEEEEEEEEEEE
DPYFTVDGIKRITDVYYRTYEPLYYSTDSSFRIVTMGGDLKFGIPFSEVDTVYFGAGFEQ
CCEEEHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCEEECCCHHHCCEEEEECCCCC
NTLDVDANTPQAYKNYVQDFGRVSNNVPLTVGWSRDARDSALVPSRGYFTQANAEYGTPI
CEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCC
GGTEYYKADLQAQYYYSFSRGFVIGFNVQGGYGNGIGNAYPIFKNYYAGGIGSVRGYEPS
CCCCEEEECCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
SLGPRDKVTNDPIGGNKMFVTNVELTFPLPGTGYDRTLRVFTFLDAGNVWGDSRQGGDTT
CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC
VGSNGLRYGYGVGLAWISPIGPLKLSLGFPLQKHTGDQYQKFQFQIGTAF
CCCCCCEEEECCCCCEECCCCCEEEEECCCHHHCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]