| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ppsA [H]
Identifier: 186476079
GI number: 186476079
Start: 1478543
End: 1480948
Strand: Reverse
Name: ppsA [H]
Synonym: Bphy_1321
Alternate gene names: 186476079
Gene position: 1480948-1478543 (Counterclockwise)
Preceding gene: 186476081
Following gene: 186476078
Centisome position: 42.57
GC content: 61.85
Gene sequence:
>2406_bases ATGACTAACGCAGTTAACGTTGCTAAGGATCAGGCGTATGTAGTTCCATTCGAGCAGTTGCGGATGACCGACGTGGAAAT CGTCGGCGGCAAGAATGCTTCGCTCGGCGAGATGATCAGTCAGCTCGCCGAAGCCGGCGTGCGCGTGCCCACGGGTTTCG CCACGACGGCGCTCGCGTTCCGCGACTTCCTGCATCACAACAACCTGACCGAACGCATCGCCCAACGTCTCGAGACGCTC GACGTCGACGACGTGAAGGCACTCGCTGCGGCAGGCAAGGAGATCCGTCAATGGATCGTCGACGCCCCGCTGCAGTCGCG TCTCGAGCAGGAGATCCGCGCGGCGTTCGAGGTCCTCTCGAACAGCTCGCCTGAAGAGCTGTCGTTCGCCGTCCGCTCGT CGGCCACGGCGGAAGACCTGCCCGACGCATCGTTCGCCGGCCAGCAGGAAAGCTATCTGAACGTCGTCGGCATCGAAGAC GTGCTTGATCGCATGAAGCATGTGTTCGCGTCGCTGTACAACGACCGCGCCATCTCCTATCGCGTCCACAAGGGCTTCAC GCATGCTGAAGTGGCGTTGTCGGCGGGCGTGCAGCGCATGGTCCGCTCGGACGTCGGCGCAGCAGGCGTGATGTTCACGC TCGATACCGAATCGGGCTTCAAGGACGCCGTCTTCATCACGTCGAGCTATGGCCTCGGTGAAACCGTCGTGCAGGGCGCG GTGAATCCGGACGAGTTCTACGTCTTCAAGACCACGCTCGCGCAGAACAAATACCCGATCATCCGTCGTTCGATCGGCTC GAAGCTCATCAAGATGGAATTCACGAAGGCGGGCGAGGAGGGCCGCGTGAAGACCGTCGACGTGCCGCACGAGCAGCGCA ATCGCTACTCGATCACCGACGAAGACGTGATCGAATTGGCGAAGTACGCCGTCATCATCGAGAAGCACTACCAGCGTCCG ATGGACATCGAGTGGGGCAAGGACGGCCGCGACGGCAAGATCTTCATCTTGCAGGCGCGTCCGGAAACGGTGAAGAGCCA GGGCGGCAACAAGGCCGAGCAGCGTTTCAAGCTGAAGGGGCAGTCGCAGGTGCTGGCGACGGGCCGCGCAATCGGTCAGA AGATCGGCGCAGGCCCCGTGCGCGTGATCCATGATCCGTCGGAAATGGAGCGTGTGCAGCCGGGCGATGTGCTGGTCGCG GACATGACCGACCCGAACTGGGAGCCGGTGATGAAGCGCGCATCGGCCATTGTGACGAATCGTGGCGGCCGGACCTGCCA CGCGGCCATTATCGCGCGTGAACTGGGCGTGCCCGCGGTGGTCGGGTGCGGCGACGCGACGGACGTGCTGAAGGACGGCG CGCTCGTCACGGTGTCCTGCTCGGAAGGCGACGAAGGCAAGATCTATGATGGTCTGCTCGAAACGGAAGTGACGGAAGTC CAGCGCGGTGAACTGCCCGAGATCGCGACCAAAATCATGATGAACGTCGGCAACCCGCAACTCGCGTTCGACTTCGCACA ATTGCCGAACAAGGGCGTCGGTCTCGCGCGCCTCGAGTTCATCATCAACAACAACATCGGCGTCCACCCGAAGGCGATTC TCGAGTATCCGAATATCGATCAGGACCTGAAGAAGGCCGTCGAAAGCGTCGCGCGCGGTCACGCGTCGCCGCGTGCGTTC TACGTCGACAAGCTGACGGAAGGCATCGCCACGATCGGCGCAGCGTTCTATCCGAAGCCCGTGATCGTGCGTTTGTCCGA CTTCAAGTCGAACGAGTACAAGAAGCTGATCGGCGGTTCGCGCTACGAGCCGGACGAAGAAAACCCGATGCTGGGCTTCC GCGGTGCGTCGCGTTACATCGCTGAAGACTTCGCGCAGGCGTTCGAAATGGAGTGCATGGCGCTCAAGCGTGTGCGCGAA GAAATGGGCCTGACGAACGTCGAGATCATGGTGCCGTTCGTGCGTACGCTGAAGCAGGCGGAGCGCGTGGTCGGCCTGCT CGCGAAGTACGGGCTCAAGCGCGGCGAGAACGGCCTGCGCCTCATCATGATGTGCGAAGTGCCGTCGAACGCGATTCTCG CCGAAGAGTTCCTGCAGTACTTCGACGGCTTTTCGATCGGCTCGAACGACTTGACCCAGCTTACGCTCGGCCTCGACCGC GACTCGGGTATGGAACTGCTCGCCGTCGACTTCGACGAGCGCGATCCCGCCGTCAAGTTCATGCTCAAGCGTGCGATCGA AACCTGCTTGCGCCTCGACAAGTACGTCGGTATCTGCGGTCAGGGCCCGTCGGACCATCCGGACTTTGCCGAGTGGCTGG TTCAGGAAGGAATCGCGTCGATCTCGCTGAACCCCGACACGATCATCGATACGTGGCAGGCACTCGCCAAACTGACGGCG AAGTAA
Upstream 100 bases:
>100_bases TCCAACAGGTTGCGTAAGGCACGGGTCCCGCTTCCATTGAGCGCCCCGTGTTCGAGCCCACTTACGCAATCGCGCATTTT TTTCACACTTAGGGGCTTGT
Downstream 100 bases:
>100_bases GCATTGCGCATCGATTTGTAGAGGTGCGTAAAACGTGCCTCTGCGAACGATAAAACGCAAACGCTTCATGCTATAAACAC CCCGGTAGCTCCGGGGTGTT
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 801; Mature: 800
Protein sequence:
>801_residues MTNAVNVAKDQAYVVPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAFRDFLHHNNLTERIAQRLETL DVDDVKALAAAGKEIRQWIVDAPLQSRLEQEIRAAFEVLSNSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIED VLDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTLDTESGFKDAVFITSSYGLGETVVQGA VNPDEFYVFKTTLAQNKYPIIRRSIGSKLIKMEFTKAGEEGRVKTVDVPHEQRNRYSITDEDVIELAKYAVIIEKHYQRP MDIEWGKDGRDGKIFILQARPETVKSQGGNKAEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVA DMTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCSEGDEGKIYDGLLETEVTEV QRGELPEIATKIMMNVGNPQLAFDFAQLPNKGVGLARLEFIINNNIGVHPKAILEYPNIDQDLKKAVESVARGHASPRAF YVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVRE EMGLTNVEIMVPFVRTLKQAERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEEFLQYFDGFSIGSNDLTQLTLGLDR DSGMELLAVDFDERDPAVKFMLKRAIETCLRLDKYVGICGQGPSDHPDFAEWLVQEGIASISLNPDTIIDTWQALAKLTA K
Sequences:
>Translated_801_residues MTNAVNVAKDQAYVVPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAFRDFLHHNNLTERIAQRLETL DVDDVKALAAAGKEIRQWIVDAPLQSRLEQEIRAAFEVLSNSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIED VLDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTLDTESGFKDAVFITSSYGLGETVVQGA VNPDEFYVFKTTLAQNKYPIIRRSIGSKLIKMEFTKAGEEGRVKTVDVPHEQRNRYSITDEDVIELAKYAVIIEKHYQRP MDIEWGKDGRDGKIFILQARPETVKSQGGNKAEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVA DMTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCSEGDEGKIYDGLLETEVTEV QRGELPEIATKIMMNVGNPQLAFDFAQLPNKGVGLARLEFIINNNIGVHPKAILEYPNIDQDLKKAVESVARGHASPRAF YVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVRE EMGLTNVEIMVPFVRTLKQAERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEEFLQYFDGFSIGSNDLTQLTLGLDR DSGMELLAVDFDERDPAVKFMLKRAIETCLRLDKYVGICGQGPSDHPDFAEWLVQEGIASISLNPDTIIDTWQALAKLTA K >Mature_800_residues TNAVNVAKDQAYVVPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAFRDFLHHNNLTERIAQRLETLD VDDVKALAAAGKEIRQWIVDAPLQSRLEQEIRAAFEVLSNSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIEDV LDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTLDTESGFKDAVFITSSYGLGETVVQGAV NPDEFYVFKTTLAQNKYPIIRRSIGSKLIKMEFTKAGEEGRVKTVDVPHEQRNRYSITDEDVIELAKYAVIIEKHYQRPM DIEWGKDGRDGKIFILQARPETVKSQGGNKAEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVAD MTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCSEGDEGKIYDGLLETEVTEVQ RGELPEIATKIMMNVGNPQLAFDFAQLPNKGVGLARLEFIINNNIGVHPKAILEYPNIDQDLKKAVESVARGHASPRAFY VDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVREE MGLTNVEIMVPFVRTLKQAERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEEFLQYFDGFSIGSNDLTQLTLGLDRD SGMELLAVDFDERDPAVKFMLKRAIETCLRLDKYVGICGQGPSDHPDFAEWLVQEGIASISLNPDTIIDTWQALAKLTAK
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=786, Percent_Identity=65.2671755725191, Blast_Score=1057, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=399, Percent_Identity=24.3107769423559, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1788726, Length=192, Percent_Identity=32.8125, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI48994992, Length=407, Percent_Identity=25.7985257985258, Blast_Score=83, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17564524, Length=237, Percent_Identity=31.6455696202532, Blast_Score=100, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 88256; Mature: 88125
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAVNVAKDQAYVVPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAF CCCCCCCCCCCEEECCHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH RDFLHHNNLTERIAQRLETLDVDDVKALAAAGKEIRQWIVDAPLQSRLEQEIRAAFEVLS HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC NSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIEDVLDRMKHVFASLYNDRAISY CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCEEEE RVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTLDTESGFKDAVFITSSYGLGETVVQGA EECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHCC VNPDEFYVFKTTLAQNKYPIIRRSIGSKLIKMEFTKAGEEGRVKTVDVPHEQRNRYSITD CCCCCEEEEEEECCCCCCCHHHHHHCCCEEEEEHHCCCCCCCEEEEECCHHHCCCCCCCH EDVIELAKYAVIIEKHYQRPMDIEWGKDGRDGKIFILQARPETVKSQGGNKAEQRFKLKG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCHHHHHHHCCC QSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVADMTDPNWEPVMKRASAIVTN CHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCC RGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCSEGDEGKIYDGLLETEVTEV CCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHH QRGELPEIATKIMMNVGNPQLAFDFAQLPNKGVGLARLEFIINNNIGVHPKAILEYPNID HCCCCHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCC QDLKKAVESVARGHASPRAFYVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGS HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCC RYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVREEMGLTNVEIMVPFVRTLKQA CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEEFLQYFDGFSIGSNDLTQLTLGLDR HHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCC DSGMELLAVDFDERDPAVKFMLKRAIETCLRLDKYVGICGQGPSDHPDFAEWLVQEGIAS CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCE ISLNPDTIIDTWQALAKLTAK EECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TNAVNVAKDQAYVVPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAF CCCCCCCCCCEEECCHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH RDFLHHNNLTERIAQRLETLDVDDVKALAAAGKEIRQWIVDAPLQSRLEQEIRAAFEVLS HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC NSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIEDVLDRMKHVFASLYNDRAISY CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCEEEE RVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTLDTESGFKDAVFITSSYGLGETVVQGA EECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHCC VNPDEFYVFKTTLAQNKYPIIRRSIGSKLIKMEFTKAGEEGRVKTVDVPHEQRNRYSITD CCCCCEEEEEEECCCCCCCHHHHHHCCCEEEEEHHCCCCCCCEEEEECCHHHCCCCCCCH EDVIELAKYAVIIEKHYQRPMDIEWGKDGRDGKIFILQARPETVKSQGGNKAEQRFKLKG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCHHHHHHHCCC QSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVADMTDPNWEPVMKRASAIVTN CHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCC RGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCSEGDEGKIYDGLLETEVTEV CCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHH QRGELPEIATKIMMNVGNPQLAFDFAQLPNKGVGLARLEFIINNNIGVHPKAILEYPNID HCCCCHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCC QDLKKAVESVARGHASPRAFYVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGS HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCC RYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVREEMGLTNVEIMVPFVRTLKQA CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEEFLQYFDGFSIGSNDLTQLTLGLDR HHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCC DSGMELLAVDFDERDPAVKFMLKRAIETCLRLDKYVGICGQGPSDHPDFAEWLVQEGIAS CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCE ISLNPDTIIDTWQALAKLTAK EECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]