Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is ppsA [H]

Identifier: 186476079

GI number: 186476079

Start: 1478543

End: 1480948

Strand: Reverse

Name: ppsA [H]

Synonym: Bphy_1321

Alternate gene names: 186476079

Gene position: 1480948-1478543 (Counterclockwise)

Preceding gene: 186476081

Following gene: 186476078

Centisome position: 42.57

GC content: 61.85

Gene sequence:

>2406_bases
ATGACTAACGCAGTTAACGTTGCTAAGGATCAGGCGTATGTAGTTCCATTCGAGCAGTTGCGGATGACCGACGTGGAAAT
CGTCGGCGGCAAGAATGCTTCGCTCGGCGAGATGATCAGTCAGCTCGCCGAAGCCGGCGTGCGCGTGCCCACGGGTTTCG
CCACGACGGCGCTCGCGTTCCGCGACTTCCTGCATCACAACAACCTGACCGAACGCATCGCCCAACGTCTCGAGACGCTC
GACGTCGACGACGTGAAGGCACTCGCTGCGGCAGGCAAGGAGATCCGTCAATGGATCGTCGACGCCCCGCTGCAGTCGCG
TCTCGAGCAGGAGATCCGCGCGGCGTTCGAGGTCCTCTCGAACAGCTCGCCTGAAGAGCTGTCGTTCGCCGTCCGCTCGT
CGGCCACGGCGGAAGACCTGCCCGACGCATCGTTCGCCGGCCAGCAGGAAAGCTATCTGAACGTCGTCGGCATCGAAGAC
GTGCTTGATCGCATGAAGCATGTGTTCGCGTCGCTGTACAACGACCGCGCCATCTCCTATCGCGTCCACAAGGGCTTCAC
GCATGCTGAAGTGGCGTTGTCGGCGGGCGTGCAGCGCATGGTCCGCTCGGACGTCGGCGCAGCAGGCGTGATGTTCACGC
TCGATACCGAATCGGGCTTCAAGGACGCCGTCTTCATCACGTCGAGCTATGGCCTCGGTGAAACCGTCGTGCAGGGCGCG
GTGAATCCGGACGAGTTCTACGTCTTCAAGACCACGCTCGCGCAGAACAAATACCCGATCATCCGTCGTTCGATCGGCTC
GAAGCTCATCAAGATGGAATTCACGAAGGCGGGCGAGGAGGGCCGCGTGAAGACCGTCGACGTGCCGCACGAGCAGCGCA
ATCGCTACTCGATCACCGACGAAGACGTGATCGAATTGGCGAAGTACGCCGTCATCATCGAGAAGCACTACCAGCGTCCG
ATGGACATCGAGTGGGGCAAGGACGGCCGCGACGGCAAGATCTTCATCTTGCAGGCGCGTCCGGAAACGGTGAAGAGCCA
GGGCGGCAACAAGGCCGAGCAGCGTTTCAAGCTGAAGGGGCAGTCGCAGGTGCTGGCGACGGGCCGCGCAATCGGTCAGA
AGATCGGCGCAGGCCCCGTGCGCGTGATCCATGATCCGTCGGAAATGGAGCGTGTGCAGCCGGGCGATGTGCTGGTCGCG
GACATGACCGACCCGAACTGGGAGCCGGTGATGAAGCGCGCATCGGCCATTGTGACGAATCGTGGCGGCCGGACCTGCCA
CGCGGCCATTATCGCGCGTGAACTGGGCGTGCCCGCGGTGGTCGGGTGCGGCGACGCGACGGACGTGCTGAAGGACGGCG
CGCTCGTCACGGTGTCCTGCTCGGAAGGCGACGAAGGCAAGATCTATGATGGTCTGCTCGAAACGGAAGTGACGGAAGTC
CAGCGCGGTGAACTGCCCGAGATCGCGACCAAAATCATGATGAACGTCGGCAACCCGCAACTCGCGTTCGACTTCGCACA
ATTGCCGAACAAGGGCGTCGGTCTCGCGCGCCTCGAGTTCATCATCAACAACAACATCGGCGTCCACCCGAAGGCGATTC
TCGAGTATCCGAATATCGATCAGGACCTGAAGAAGGCCGTCGAAAGCGTCGCGCGCGGTCACGCGTCGCCGCGTGCGTTC
TACGTCGACAAGCTGACGGAAGGCATCGCCACGATCGGCGCAGCGTTCTATCCGAAGCCCGTGATCGTGCGTTTGTCCGA
CTTCAAGTCGAACGAGTACAAGAAGCTGATCGGCGGTTCGCGCTACGAGCCGGACGAAGAAAACCCGATGCTGGGCTTCC
GCGGTGCGTCGCGTTACATCGCTGAAGACTTCGCGCAGGCGTTCGAAATGGAGTGCATGGCGCTCAAGCGTGTGCGCGAA
GAAATGGGCCTGACGAACGTCGAGATCATGGTGCCGTTCGTGCGTACGCTGAAGCAGGCGGAGCGCGTGGTCGGCCTGCT
CGCGAAGTACGGGCTCAAGCGCGGCGAGAACGGCCTGCGCCTCATCATGATGTGCGAAGTGCCGTCGAACGCGATTCTCG
CCGAAGAGTTCCTGCAGTACTTCGACGGCTTTTCGATCGGCTCGAACGACTTGACCCAGCTTACGCTCGGCCTCGACCGC
GACTCGGGTATGGAACTGCTCGCCGTCGACTTCGACGAGCGCGATCCCGCCGTCAAGTTCATGCTCAAGCGTGCGATCGA
AACCTGCTTGCGCCTCGACAAGTACGTCGGTATCTGCGGTCAGGGCCCGTCGGACCATCCGGACTTTGCCGAGTGGCTGG
TTCAGGAAGGAATCGCGTCGATCTCGCTGAACCCCGACACGATCATCGATACGTGGCAGGCACTCGCCAAACTGACGGCG
AAGTAA

Upstream 100 bases:

>100_bases
TCCAACAGGTTGCGTAAGGCACGGGTCCCGCTTCCATTGAGCGCCCCGTGTTCGAGCCCACTTACGCAATCGCGCATTTT
TTTCACACTTAGGGGCTTGT

Downstream 100 bases:

>100_bases
GCATTGCGCATCGATTTGTAGAGGTGCGTAAAACGTGCCTCTGCGAACGATAAAACGCAAACGCTTCATGCTATAAACAC
CCCGGTAGCTCCGGGGTGTT

Product: phosphoenolpyruvate synthase

Products: NA

Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]

Number of amino acids: Translated: 801; Mature: 800

Protein sequence:

>801_residues
MTNAVNVAKDQAYVVPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAFRDFLHHNNLTERIAQRLETL
DVDDVKALAAAGKEIRQWIVDAPLQSRLEQEIRAAFEVLSNSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIED
VLDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTLDTESGFKDAVFITSSYGLGETVVQGA
VNPDEFYVFKTTLAQNKYPIIRRSIGSKLIKMEFTKAGEEGRVKTVDVPHEQRNRYSITDEDVIELAKYAVIIEKHYQRP
MDIEWGKDGRDGKIFILQARPETVKSQGGNKAEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVA
DMTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCSEGDEGKIYDGLLETEVTEV
QRGELPEIATKIMMNVGNPQLAFDFAQLPNKGVGLARLEFIINNNIGVHPKAILEYPNIDQDLKKAVESVARGHASPRAF
YVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVRE
EMGLTNVEIMVPFVRTLKQAERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEEFLQYFDGFSIGSNDLTQLTLGLDR
DSGMELLAVDFDERDPAVKFMLKRAIETCLRLDKYVGICGQGPSDHPDFAEWLVQEGIASISLNPDTIIDTWQALAKLTA
K

Sequences:

>Translated_801_residues
MTNAVNVAKDQAYVVPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAFRDFLHHNNLTERIAQRLETL
DVDDVKALAAAGKEIRQWIVDAPLQSRLEQEIRAAFEVLSNSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIED
VLDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTLDTESGFKDAVFITSSYGLGETVVQGA
VNPDEFYVFKTTLAQNKYPIIRRSIGSKLIKMEFTKAGEEGRVKTVDVPHEQRNRYSITDEDVIELAKYAVIIEKHYQRP
MDIEWGKDGRDGKIFILQARPETVKSQGGNKAEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVA
DMTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCSEGDEGKIYDGLLETEVTEV
QRGELPEIATKIMMNVGNPQLAFDFAQLPNKGVGLARLEFIINNNIGVHPKAILEYPNIDQDLKKAVESVARGHASPRAF
YVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVRE
EMGLTNVEIMVPFVRTLKQAERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEEFLQYFDGFSIGSNDLTQLTLGLDR
DSGMELLAVDFDERDPAVKFMLKRAIETCLRLDKYVGICGQGPSDHPDFAEWLVQEGIASISLNPDTIIDTWQALAKLTA
K
>Mature_800_residues
TNAVNVAKDQAYVVPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAFRDFLHHNNLTERIAQRLETLD
VDDVKALAAAGKEIRQWIVDAPLQSRLEQEIRAAFEVLSNSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIEDV
LDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTLDTESGFKDAVFITSSYGLGETVVQGAV
NPDEFYVFKTTLAQNKYPIIRRSIGSKLIKMEFTKAGEEGRVKTVDVPHEQRNRYSITDEDVIELAKYAVIIEKHYQRPM
DIEWGKDGRDGKIFILQARPETVKSQGGNKAEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVAD
MTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCSEGDEGKIYDGLLETEVTEVQ
RGELPEIATKIMMNVGNPQLAFDFAQLPNKGVGLARLEFIINNNIGVHPKAILEYPNIDQDLKKAVESVARGHASPRAFY
VDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVREE
MGLTNVEIMVPFVRTLKQAERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEEFLQYFDGFSIGSNDLTQLTLGLDRD
SGMELLAVDFDERDPAVKFMLKRAIETCLRLDKYVGICGQGPSDHPDFAEWLVQEGIASISLNPDTIIDTWQALAKLTAK

Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]

COG id: COG0574

COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PEP-utilizing enzyme family [H]

Homologues:

Organism=Escherichia coli, GI1787994, Length=786, Percent_Identity=65.2671755725191, Blast_Score=1057, Evalue=0.0,
Organism=Escherichia coli, GI1788756, Length=399, Percent_Identity=24.3107769423559, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1788726, Length=192, Percent_Identity=32.8125, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI48994992, Length=407, Percent_Identity=25.7985257985258, Blast_Score=83, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17564524, Length=237, Percent_Identity=31.6455696202532, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008279
- InterPro:   IPR006319
- InterPro:   IPR018274
- InterPro:   IPR023151
- InterPro:   IPR000121
- InterPro:   IPR002192
- InterPro:   IPR015813 [H]

Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]

EC number: =2.7.9.2 [H]

Molecular weight: Translated: 88256; Mature: 88125

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNAVNVAKDQAYVVPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAF
CCCCCCCCCCCEEECCHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
RDFLHHNNLTERIAQRLETLDVDDVKALAAAGKEIRQWIVDAPLQSRLEQEIRAAFEVLS
HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
NSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIEDVLDRMKHVFASLYNDRAISY
CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCEEEE
RVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTLDTESGFKDAVFITSSYGLGETVVQGA
EECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHCC
VNPDEFYVFKTTLAQNKYPIIRRSIGSKLIKMEFTKAGEEGRVKTVDVPHEQRNRYSITD
CCCCCEEEEEEECCCCCCCHHHHHHCCCEEEEEHHCCCCCCCEEEEECCHHHCCCCCCCH
EDVIELAKYAVIIEKHYQRPMDIEWGKDGRDGKIFILQARPETVKSQGGNKAEQRFKLKG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCHHHHHHHCCC
QSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVADMTDPNWEPVMKRASAIVTN
CHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCC
RGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCSEGDEGKIYDGLLETEVTEV
CCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHH
QRGELPEIATKIMMNVGNPQLAFDFAQLPNKGVGLARLEFIINNNIGVHPKAILEYPNID
HCCCCHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCC
QDLKKAVESVARGHASPRAFYVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGS
HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCC
RYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVREEMGLTNVEIMVPFVRTLKQA
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEEFLQYFDGFSIGSNDLTQLTLGLDR
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCC
DSGMELLAVDFDERDPAVKFMLKRAIETCLRLDKYVGICGQGPSDHPDFAEWLVQEGIAS
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCE
ISLNPDTIIDTWQALAKLTAK
EECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNAVNVAKDQAYVVPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAF
CCCCCCCCCCEEECCHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
RDFLHHNNLTERIAQRLETLDVDDVKALAAAGKEIRQWIVDAPLQSRLEQEIRAAFEVLS
HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
NSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIEDVLDRMKHVFASLYNDRAISY
CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCEEEE
RVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTLDTESGFKDAVFITSSYGLGETVVQGA
EECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHCC
VNPDEFYVFKTTLAQNKYPIIRRSIGSKLIKMEFTKAGEEGRVKTVDVPHEQRNRYSITD
CCCCCEEEEEEECCCCCCCHHHHHHCCCEEEEEHHCCCCCCCEEEEECCHHHCCCCCCCH
EDVIELAKYAVIIEKHYQRPMDIEWGKDGRDGKIFILQARPETVKSQGGNKAEQRFKLKG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCHHHHHHHCCC
QSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVADMTDPNWEPVMKRASAIVTN
CHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCC
RGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCSEGDEGKIYDGLLETEVTEV
CCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHH
QRGELPEIATKIMMNVGNPQLAFDFAQLPNKGVGLARLEFIINNNIGVHPKAILEYPNID
HCCCCHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCC
QDLKKAVESVARGHASPRAFYVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGS
HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCC
RYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVREEMGLTNVEIMVPFVRTLKQA
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEEFLQYFDGFSIGSNDLTQLTLGLDR
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCC
DSGMELLAVDFDERDPAVKFMLKRAIETCLRLDKYVGICGQGPSDHPDFAEWLVQEGIAS
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCE
ISLNPDTIIDTWQALAKLTAK
EECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]