| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476078
Identifier: 186476078
GI number: 186476078
Start: 1477971
End: 1478423
Strand: Reverse
Name: 186476078
Synonym: Bphy_1320
Alternate gene names: NA
Gene position: 1478423-1477971 (Counterclockwise)
Preceding gene: 186476079
Following gene: 186476077
Centisome position: 42.49
GC content: 66.23
Gene sequence:
>453_bases ATGTGGCACAGCGGCTTGTTCTGGTGGATCGGCGCAGGCGTGCTGATCGTGCTCGAACTGATGCACGGCACGTTCTATCT GCTCATGGTGGCACTTGGCTTCATCGCGGCGGCGATTGCGCATCTCGCCGGGCTCGATCTCTCGCTGCAACTCGGCATTG CCGCTGCCGTCGCCCTCGCGGCGGTGCTTCTGCTGCGCAAGTCACGCTTCGGGCGCAAGACCCGAAACCGCGCCGAGGCT GCGCACAATCCCGACGTGAACCTCGATATCGGCTCGACGCTGACCGTCTCTGCGTGGCACGACGGGCACGCGCGTACGAA CTACCGGGGCGCATCGTGGGACGTCGAACTCGCGCCGGGCGAGCGGGAGGACGCGAATCTCTACGAAATCACCGCGTTGC GGGGCAATTGCCTTGTCGTCGTCGCGAGCCGGCATGCGGGGGCGAGGGCCTGA
Upstream 100 bases:
>100_bases AGAGGTGCGTAAAACGTGCCTCTGCGAACGATAAAACGCAAACGCTTCATGCTATAAACACCCCGGTAGCTCCGGGGTGT TTTGCTTTGTGGAGGCGCAG
Downstream 100 bases:
>100_bases GCCGTCTGAACGGATTCATGCGTCGAGAGGACGCGGACCGGGCGCATGCGGATGCGCACAACAATTCAAAAACAGAATGG GGGTGCAGGAATGATGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MWHSGLFWWIGAGVLIVLELMHGTFYLLMVALGFIAAAIAHLAGLDLSLQLGIAAAVALAAVLLLRKSRFGRKTRNRAEA AHNPDVNLDIGSTLTVSAWHDGHARTNYRGASWDVELAPGEREDANLYEITALRGNCLVVVASRHAGARA
Sequences:
>Translated_150_residues MWHSGLFWWIGAGVLIVLELMHGTFYLLMVALGFIAAAIAHLAGLDLSLQLGIAAAVALAAVLLLRKSRFGRKTRNRAEA AHNPDVNLDIGSTLTVSAWHDGHARTNYRGASWDVELAPGEREDANLYEITALRGNCLVVVASRHAGARA >Mature_150_residues MWHSGLFWWIGAGVLIVLELMHGTFYLLMVALGFIAAAIAHLAGLDLSLQLGIAAAVALAAVLLLRKSRFGRKTRNRAEA AHNPDVNLDIGSTLTVSAWHDGHARTNYRGASWDVELAPGEREDANLYEITALRGNCLVVVASRHAGARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16166; Mature: 16166
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWHSGLFWWIGAGVLIVLELMHGTFYLLMVALGFIAAAIAHLAGLDLSLQLGIAAAVALA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHH AVLLLRKSRFGRKTRNRAEAAHNPDVNLDIGSTLTVSAWHDGHARTNYRGASWDVELAPG HHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCEEEEECCC EREDANLYEITALRGNCLVVVASRHAGARA CCCCCCEEEEEEECCCEEEEEECCCCCCCC >Mature Secondary Structure MWHSGLFWWIGAGVLIVLELMHGTFYLLMVALGFIAAAIAHLAGLDLSLQLGIAAAVALA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHH AVLLLRKSRFGRKTRNRAEAAHNPDVNLDIGSTLTVSAWHDGHARTNYRGASWDVELAPG HHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCEEEEECCC EREDANLYEITALRGNCLVVVASRHAGARA CCCCCCEEEEEEECCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA