| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is allA [H]
Identifier: 186476055
GI number: 186476055
Start: 1456048
End: 1456557
Strand: Reverse
Name: allA [H]
Synonym: Bphy_1297
Alternate gene names: 186476055
Gene position: 1456557-1456048 (Counterclockwise)
Preceding gene: 186476056
Following gene: 186476052
Centisome position: 41.86
GC content: 58.24
Gene sequence:
>510_bases ATGAAGACACTTGCCATCGAACCGCTGACACGCGAATCGTTCGCGCCGTTCGGCGACGTGATCGAACTGGACGGGGCGAA GCAGATTCCGATCAATCTTGGCACGACGACCCGCTATCACGATCTCGCGAACGTGGATGTCACGGACGACGGCGGCCGCA CGCTGGTCAATCTGTTTCGCGGGCAACCGCGTGTGCTGCCATTCGAAGTGAGGATGATGGAACGGCATCCTCTTGGATCG CAGGCATTCATTCCGTTGAACGACAAGCCTTATCTCGTTGTGGTGGCGCCTGTCGGCGAGCTGGATGAATCGCAGATCCG TGCTTTCGTGACTAGTGGCTGGCAGGGCGTGAACTATGCGAAGGGCGTATGGCACCATCCGCTGCTCTCGCTGGGTGATG TGAGCGATTTCATCGTCATCGATCGGGGTGGAGAGGGGGTGAATCTCAATGAACTCGATCTGCGGGAATCGCTGTGGTTG ACGGAGGAGGCGTTGAGCGTCGTCGTTTGA
Upstream 100 bases:
>100_bases AAAGCGAGATTGCCGCACTCGGTCCTGTCACCCATATCCGCTTCAACATCATTCCCGACGGCGGTGTCTCGCGTCTGCGT CTGTGGGGCACGCTCGCATC
Downstream 100 bases:
>100_bases GTCAGGTTTTTTGCCTGCGGCGCCTTGATGCTCGGAAGCCCATTGCGGATGGAGATCTGCGATGGGTTTTTTGTTTTTTT GTCGCTTGTTGCGTGCGTTT
Product: ureidoglycolate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKTLAIEPLTRESFAPFGDVIELDGAKQIPINLGTTTRYHDLANVDVTDDGGRTLVNLFRGQPRVLPFEVRMMERHPLGS QAFIPLNDKPYLVVVAPVGELDESQIRAFVTSGWQGVNYAKGVWHHPLLSLGDVSDFIVIDRGGEGVNLNELDLRESLWL TEEALSVVV
Sequences:
>Translated_169_residues MKTLAIEPLTRESFAPFGDVIELDGAKQIPINLGTTTRYHDLANVDVTDDGGRTLVNLFRGQPRVLPFEVRMMERHPLGS QAFIPLNDKPYLVVVAPVGELDESQIRAFVTSGWQGVNYAKGVWHHPLLSLGDVSDFIVIDRGGEGVNLNELDLRESLWL TEEALSVVV >Mature_169_residues MKTLAIEPLTRESFAPFGDVIELDGAKQIPINLGTTTRYHDLANVDVTDDGGRTLVNLFRGQPRVLPFEVRMMERHPLGS QAFIPLNDKPYLVVVAPVGELDESQIRAFVTSGWQGVNYAKGVWHHPLLSLGDVSDFIVIDRGGEGVNLNELDLRESLWL TEEALSVVV
Specific function: Involved In The Anaerobic Utilization Of Allantoin. Reinforces The Induction Of Genes Involved In The Degradation Of Allantoin And Glyoxylate By Producing Glyoxylate. [C]
COG id: COG3194
COG function: function code F; Ureidoglycolate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureidoglycolate hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786714, Length=143, Percent_Identity=48.2517482517483, Blast_Score=134, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6322223, Length=157, Percent_Identity=31.2101910828025, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR007247 [H]
Pfam domain/function: PF04115 Ureidogly_hydro [H]
EC number: =3.5.3.19 [H]
Molecular weight: Translated: 18722; Mature: 18722
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLAIEPLTRESFAPFGDVIELDGAKQIPINLGTTTRYHDLANVDVTDDGGRTLVNLFR CCCEECCCCCCCCCCCCCCEEEECCCEECEEECCCCCCCCCCCCEEEECCCCHHHHHHHC GQPRVLPFEVRMMERHPLGSQAFIPLNDKPYLVVVAPVGELDESQIRAFVTSGWQGVNYA CCCCEEEHEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCC KGVWHHPLLSLGDVSDFIVIDRGGEGVNLNELDLRESLWLTEEALSVVV CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCHHHHHHCC >Mature Secondary Structure MKTLAIEPLTRESFAPFGDVIELDGAKQIPINLGTTTRYHDLANVDVTDDGGRTLVNLFR CCCEECCCCCCCCCCCCCCEEEECCCEECEEECCCCCCCCCCCCEEEECCCCHHHHHHHC GQPRVLPFEVRMMERHPLGSQAFIPLNDKPYLVVVAPVGELDESQIRAFVTSGWQGVNYA CCCCEEEHEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCC KGVWHHPLLSLGDVSDFIVIDRGGEGVNLNELDLRESLWLTEEALSVVV CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA