| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is atzB [H]
Identifier: 186476052
GI number: 186476052
Start: 1451620
End: 1453029
Strand: Reverse
Name: atzB [H]
Synonym: Bphy_1293
Alternate gene names: 186476052
Gene position: 1453029-1451620 (Counterclockwise)
Preceding gene: 186476055
Following gene: 186476050
Centisome position: 41.76
GC content: 65.04
Gene sequence:
>1410_bases ATGACGTTGCAAACCAATGCAACCGGTGTGACGGGAACGGACGGGCCGCGCGGCCGGACGATGCTGGTCCGACACGCGGA CGTGCTCGTCACGATGGACGGCGAACGTCGCGAGCTGCGCGACGGCGGTCTCTATATCGAAGACAACCGGATCGTCGCCG TCGGTCCAACGCACACACTGCCGGGTACTGCGGACGCGATCCTCGACATGACGGGGCATCTCGTCATTCCTGGCCTCGTC AACACGCACCATCACATGTATCAGAGCCTGACGCGCGCGATTCCCGCTGCACAGGACGCCGAGCTGTTCGGCTGGCTGAC GAACCTCTATAAGGTGTGGGCGCACCTCACGCCGGAAATGATCGAAGTGTCGACGCTGACGGCGATGGCCGAACTGCTGC TGTCCGGCTGCACTACGTCGAGCGACCACCTGTACATCTATCCGAACGGCAGCCGGCTCGATGACAGCATCGCGGCCGCA CGGCGCATCGGCATGCGCTTTCATGCAAGCCGCGGGAGCATGAGCGTCGGACAGAAAGACGGCGGCCTGCCGCCCGATTG CGTCGTCGAGCGGGAAGCGGACATTCTGAAGGACACCCAGCGCCTGATCGACGCGTATCACGACGCTGGCCGATACGCGA TGCTGCGCGTCGTCGTTGCGCCGTGCTCGCCGTTTTCGGTGAGCCGCGATCTGATGCGCGAGTCGGCCGCACTGGCGCGC CAATACGGCGTATCGCTGCACACGCATCTCGCGGAGAACGCGAACGATATTGCATACAGCCGCGAAAAGTTCGGCATGAC GCCCGCAGAATATGCCGAGGAACTTGGCTGGATCGGTCCCGATGTATGGCACGCGCACTGCGTTCAACTCGATGACGCCG GCATCCGGCTGTTCGCGCGCACGGGGACGGGCGTCGCGCATTGCCCGTGTTCCAACATGCGCCTTGCGTCGGGCATCGCG CCCGTGAAGAAGATGCGGCTGGCGGGCGTCCCCGTCGGATTGGGGGTCGACGGATCGGCGTCGAATGACGGCGCGCAGAT GGTCGCCGAGGTGCGACAGGCGATGCTGCTGCAGCGCGTCGGCTTCGGCCCGGACGCGATGACGGCACGCGAGGCGCTCG AGATCGCGACGCTCGGCGGGGCGAAGGTGCTGAACCGCGACGATATCGGCGCGCTGGCGCCCGGCATGGCGGCGGACTTT GTGTCGTTCGATCTGCGCCAGCCGCTGTTTGCGGGCGCGCTGCACGATCCCGTTGCGGCATTGGTGTTCTGCGCGCCCTC GCAGGTGTCGACGAGTGTGATCGGCGGAAAGCAGGTGGTGAAAGACGGCGTGCTGACGACTGTCGATCTTGGCCCGGTAA TCGAACGGCACAATCATCTCGCGAAGACGCTGTACCAAAGTGCAGCTTGA
Upstream 100 bases:
>100_bases CGATGCAGCTTCGAGCGGCCACATGCAGTGGGCGCGGACAGGTGGCAGCATCGTGCATCGGCCTCATCGGCGGCGATAGA GGGCAGCACTGGAGAAACGA
Downstream 100 bases:
>100_bases GCAAAGCACTAAAACGCAAAGCGGCGGTTCGAGACCGCCGCCTGCACAGTAGTGCCTGTGCGTTACCTGTCGATCAACGT CTTGGTCGCTTCGGCGACGA
Product: hydroxydechloroatrazine ethylaminohydrolase
Products: NA
Alternate protein names: Hydroxyatrazine hydrolase [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MTLQTNATGVTGTDGPRGRTMLVRHADVLVTMDGERRELRDGGLYIEDNRIVAVGPTHTLPGTADAILDMTGHLVIPGLV NTHHHMYQSLTRAIPAAQDAELFGWLTNLYKVWAHLTPEMIEVSTLTAMAELLLSGCTTSSDHLYIYPNGSRLDDSIAAA RRIGMRFHASRGSMSVGQKDGGLPPDCVVEREADILKDTQRLIDAYHDAGRYAMLRVVVAPCSPFSVSRDLMRESAALAR QYGVSLHTHLAENANDIAYSREKFGMTPAEYAEELGWIGPDVWHAHCVQLDDAGIRLFARTGTGVAHCPCSNMRLASGIA PVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQAMLLQRVGFGPDAMTAREALEIATLGGAKVLNRDDIGALAPGMAADF VSFDLRQPLFAGALHDPVAALVFCAPSQVSTSVIGGKQVVKDGVLTTVDLGPVIERHNHLAKTLYQSAA
Sequences:
>Translated_469_residues MTLQTNATGVTGTDGPRGRTMLVRHADVLVTMDGERRELRDGGLYIEDNRIVAVGPTHTLPGTADAILDMTGHLVIPGLV NTHHHMYQSLTRAIPAAQDAELFGWLTNLYKVWAHLTPEMIEVSTLTAMAELLLSGCTTSSDHLYIYPNGSRLDDSIAAA RRIGMRFHASRGSMSVGQKDGGLPPDCVVEREADILKDTQRLIDAYHDAGRYAMLRVVVAPCSPFSVSRDLMRESAALAR QYGVSLHTHLAENANDIAYSREKFGMTPAEYAEELGWIGPDVWHAHCVQLDDAGIRLFARTGTGVAHCPCSNMRLASGIA PVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQAMLLQRVGFGPDAMTAREALEIATLGGAKVLNRDDIGALAPGMAADF VSFDLRQPLFAGALHDPVAALVFCAPSQVSTSVIGGKQVVKDGVLTTVDLGPVIERHNHLAKTLYQSAA >Mature_468_residues TLQTNATGVTGTDGPRGRTMLVRHADVLVTMDGERRELRDGGLYIEDNRIVAVGPTHTLPGTADAILDMTGHLVIPGLVN THHHMYQSLTRAIPAAQDAELFGWLTNLYKVWAHLTPEMIEVSTLTAMAELLLSGCTTSSDHLYIYPNGSRLDDSIAAAR RIGMRFHASRGSMSVGQKDGGLPPDCVVEREADILKDTQRLIDAYHDAGRYAMLRVVVAPCSPFSVSRDLMRESAALARQ YGVSLHTHLAENANDIAYSREKFGMTPAEYAEELGWIGPDVWHAHCVQLDDAGIRLFARTGTGVAHCPCSNMRLASGIAP VKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQAMLLQRVGFGPDAMTAREALEIATLGGAKVLNRDDIGALAPGMAADFV SFDLRQPLFAGALHDPVAALVFCAPSQVSTSVIGGKQVVKDGVLTTVDLGPVIERHNHLAKTLYQSAA
Specific function: Catalyzes the deamination reaction of hydroxyatrazine to N-isopropylammelide (dihydroxy-isopropyl-atrazine). The enzyme is also capable of catalyzing some dechlorinating reactions [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=397, Percent_Identity=24.6851385390428, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI1789249, Length=381, Percent_Identity=29.1338582677165, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI87082177, Length=381, Percent_Identity=25.4593175853018, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17540282, Length=445, Percent_Identity=23.1460674157303, Blast_Score=94, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6319963, Length=344, Percent_Identity=25.2906976744186, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI24643849, Length=443, Percent_Identity=23.4762979683973, Blast_Score=92, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.99.3 [H]
Molecular weight: Translated: 50247; Mature: 50116
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQTNATGVTGTDGPRGRTMLVRHADVLVTMDGERRELRDGGLYIEDNRIVAVGPTHTL CEECCCCCCCCCCCCCCCCEEEEEECEEEEEECCCHHHHHCCCEEEECCEEEEECCCCCC PGTADAILDMTGHLVIPGLVNTHHHMYQSLTRAIPAAQDAELFGWLTNLYKVWAHLTPEM CCCHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHH IEVSTLTAMAELLLSGCTTSSDHLYIYPNGSRLDDSIAAARRIGMRFHASRGSMSVGQKD HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHEEECCCCCCCCCCCC GGLPPDCVVEREADILKDTQRLIDAYHDAGRYAMLRVVVAPCSPFSVSRDLMRESAALAR CCCCCHHEECCHHHHHHHHHHHHHHHHCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHH QYGVSLHTHLAENANDIAYSREKFGMTPAEYAEELGWIGPDVWHAHCVQLDDAGIRLFAR HHCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHEEEECCCCEEEEEE TGTGVAHCPCSNMRLASGIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQAMLLQRV CCCCEEECCCCCCCHHHCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH GFGPDAMTAREALEIATLGGAKVLNRDDIGALAPGMAADFVSFDLRQPLFAGALHDPVAA CCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHH LVFCAPSQVSTSVIGGKQVVKDGVLTTVDLGPVIERHNHLAKTLYQSAA HHEECCCHHHHHHHCCHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLQTNATGVTGTDGPRGRTMLVRHADVLVTMDGERRELRDGGLYIEDNRIVAVGPTHTL EECCCCCCCCCCCCCCCCEEEEEECEEEEEECCCHHHHHCCCEEEECCEEEEECCCCCC PGTADAILDMTGHLVIPGLVNTHHHMYQSLTRAIPAAQDAELFGWLTNLYKVWAHLTPEM CCCHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHH IEVSTLTAMAELLLSGCTTSSDHLYIYPNGSRLDDSIAAARRIGMRFHASRGSMSVGQKD HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHEEECCCCCCCCCCCC GGLPPDCVVEREADILKDTQRLIDAYHDAGRYAMLRVVVAPCSPFSVSRDLMRESAALAR CCCCCHHEECCHHHHHHHHHHHHHHHHCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHH QYGVSLHTHLAENANDIAYSREKFGMTPAEYAEELGWIGPDVWHAHCVQLDDAGIRLFAR HHCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHEEEECCCCEEEEEE TGTGVAHCPCSNMRLASGIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQAMLLQRV CCCCEEECCCCCCCHHHCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH GFGPDAMTAREALEIATLGGAKVLNRDDIGALAPGMAADFVSFDLRQPLFAGALHDPVAA CCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHH LVFCAPSQVSTSVIGGKQVVKDGVLTTVDLGPVIERHNHLAKTLYQSAA HHEECCCHHHHHHHCCHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9055410 [H]