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The map label for this gene is alc1 [H]

Identifier: 186476056

GI number: 186476056

Start: 1456554

End: 1457567

Strand: Reverse

Name: alc1 [H]

Synonym: Bphy_1298

Alternate gene names: 186476056

Gene position: 1457567-1456554 (Counterclockwise)

Preceding gene: 186476057

Following gene: 186476055

Centisome position: 41.89

GC content: 62.62

Gene sequence:

>1014_bases
ATGGCACTCCCGATTCTCGATCCCAACGCACCCGAGTTCACGCGCCGTTTCGTGAATCTCGCCGACCCGCGTCTCGGCGC
ACAGGCGCTCGAATCGAGCGACGACTTCTTTGCGCCGAAAGACCGCATGCTGAATCCGGAGCCGGCCGTCTTCGTTCCCG
GCAAGTACGATGAGCACGGCAAATGGATGGACGGCTGGGAAACGCGCCGCAAGCGCACGACGGGCTACGACTGGTGCATC
GTGAAGCTCGCGCGTCCAGGTGTGATCAAGGGCTTCGACATCGACACGAGTCACTTCACGGGTAACTTCCCGCCGGCGGC
ATCGGTGGAAGCGACGCGTGTGGTCGACGGCGCGCCAAACCAGTCGACGCAATGGACTGAGATCGTCCCGTCGACGACAT
TGCAGGGCAACAGCCATCACTACATCGATGTGAGCGACGCAAACGCGTACACGCACCTTCGTGTGAACATCTATCCGGAC
GGCGGCATCGCGCGTTTGCGTGTATACGGTCAGCCGCAGGTCGACTGGGCGGGCGCGAGCCGTACCGACCTGTTCGATCT
GGCCGCGATGGAAAACGGCGCCTATCTGGTCGCTGCGAACAACCAGCACTTCGGCGCCGCATCGACGCTGCTGATGCCGG
GCCGCGGCGTCAACATGGGCGATGGCTGGGAAACGCGCCGCCGCCGCGAGCCAGGCAACGACTGGGCGATCGTCGCGCTC
GCGCAACCGGGCGTGATCAAGAAGATCGAAGTTGATACCGCGCACTTCAAGGGCAACTATCCGGACCGCTGCTCGATTCA
GGCTGCGTTCGTCACGGGCGGCACCGACAGTTCGCTGATCACGCAGGCGATGTTCTGGCCGGTGCTACTCGGCGAACAGA
AGCTGCAAATGGACAAGCAGCACTTCTATGAAAGCGAGATTGCCGCACTCGGTCCTGTCACCCATATCCGCTTCAACATC
ATTCCCGACGGCGGTGTCTCGCGTCTGCGTCTGTGGGGCACGCTCGCATCATGA

Upstream 100 bases:

>100_bases
ATCGATGCGTGATCGTCGCGTGAAAATCGCGCGATCGACACGAAAGCGACGCGTGTCCAAGCACACAAACGGCAACAACC
AGACCTGAAGGAAGATAACG

Downstream 100 bases:

>100_bases
AGACACTTGCCATCGAACCGCTGACACGCGAATCGTTCGCGCCGTTCGGCGACGTGATCGAACTGGACGGGGCGAAGCAG
ATTCCGATCAATCTTGGCAC

Product: allantoicase

Products: NA

Alternate protein names: Allantoate amidinohydrolase 1 [H]

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MALPILDPNAPEFTRRFVNLADPRLGAQALESSDDFFAPKDRMLNPEPAVFVPGKYDEHGKWMDGWETRRKRTTGYDWCI
VKLARPGVIKGFDIDTSHFTGNFPPAASVEATRVVDGAPNQSTQWTEIVPSTTLQGNSHHYIDVSDANAYTHLRVNIYPD
GGIARLRVYGQPQVDWAGASRTDLFDLAAMENGAYLVAANNQHFGAASTLLMPGRGVNMGDGWETRRRREPGNDWAIVAL
AQPGVIKKIEVDTAHFKGNYPDRCSIQAAFVTGGTDSSLITQAMFWPVLLGEQKLQMDKQHFYESEIAALGPVTHIRFNI
IPDGGVSRLRLWGTLAS

Sequences:

>Translated_337_residues
MALPILDPNAPEFTRRFVNLADPRLGAQALESSDDFFAPKDRMLNPEPAVFVPGKYDEHGKWMDGWETRRKRTTGYDWCI
VKLARPGVIKGFDIDTSHFTGNFPPAASVEATRVVDGAPNQSTQWTEIVPSTTLQGNSHHYIDVSDANAYTHLRVNIYPD
GGIARLRVYGQPQVDWAGASRTDLFDLAAMENGAYLVAANNQHFGAASTLLMPGRGVNMGDGWETRRRREPGNDWAIVAL
AQPGVIKKIEVDTAHFKGNYPDRCSIQAAFVTGGTDSSLITQAMFWPVLLGEQKLQMDKQHFYESEIAALGPVTHIRFNI
IPDGGVSRLRLWGTLAS
>Mature_336_residues
ALPILDPNAPEFTRRFVNLADPRLGAQALESSDDFFAPKDRMLNPEPAVFVPGKYDEHGKWMDGWETRRKRTTGYDWCIV
KLARPGVIKGFDIDTSHFTGNFPPAASVEATRVVDGAPNQSTQWTEIVPSTTLQGNSHHYIDVSDANAYTHLRVNIYPDG
GIARLRVYGQPQVDWAGASRTDLFDLAAMENGAYLVAANNQHFGAASTLLMPGRGVNMGDGWETRRRREPGNDWAIVALA
QPGVIKKIEVDTAHFKGNYPDRCSIQAAFVTGGTDSSLITQAMFWPVLLGEQKLQMDKQHFYESEIAALGPVTHIRFNII
PDGGVSRLRLWGTLAS

Specific function: Unknown

COG id: COG4266

COG function: function code F; Allantoicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the allantoicase family [H]

Homologues:

Organism=Homo sapiens, GI144953901, Length=369, Percent_Identity=37.6693766937669, Blast_Score=256, Evalue=3e-68,
Organism=Saccharomyces cerevisiae, GI6322220, Length=328, Percent_Identity=37.8048780487805, Blast_Score=223, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005164
- InterPro:   IPR015908
- InterPro:   IPR008979 [H]

Pfam domain/function: PF03561 Allantoicase [H]

EC number: =3.5.3.4 [H]

Molecular weight: Translated: 37255; Mature: 37124

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPILDPNAPEFTRRFVNLADPRLGAQALESSDDFFAPKDRMLNPEPAVFVPGKYDEHG
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHCCCCCCCCEEECCCCCCCC
KWMDGWETRRKRTTGYDWCIVKLARPGVIKGFDIDTSHFTGNFPPAASVEATRVVDGAPN
CCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCC
QSTQWTEIVPSTTLQGNSHHYIDVSDANAYTHLRVNIYPDGGIARLRVYGQPQVDWAGAS
CCCCEEEECCCCEECCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEEECCCCEEECCCC
RTDLFDLAAMENGAYLVAANNQHFGAASTLLMPGRGVNMGDGWETRRRREPGNDWAIVAL
CCCEEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCEEEEEE
AQPGVIKKIEVDTAHFKGNYPDRCSIQAAFVTGGTDSSLITQAMFWPVLLGEQKLQMDKQ
ECCCCEEEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHH
HFYESEIAALGPVTHIRFNIIPDGGVSRLRLWGTLAS
HHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEEECC
>Mature Secondary Structure 
ALPILDPNAPEFTRRFVNLADPRLGAQALESSDDFFAPKDRMLNPEPAVFVPGKYDEHG
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHCCCCCCCCEEECCCCCCCC
KWMDGWETRRKRTTGYDWCIVKLARPGVIKGFDIDTSHFTGNFPPAASVEATRVVDGAPN
CCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCC
QSTQWTEIVPSTTLQGNSHHYIDVSDANAYTHLRVNIYPDGGIARLRVYGQPQVDWAGAS
CCCCEEEECCCCEECCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEEECCCCEEECCCC
RTDLFDLAAMENGAYLVAANNQHFGAASTLLMPGRGVNMGDGWETRRRREPGNDWAIVAL
CCCEEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCEEEEEE
AQPGVIKKIEVDTAHFKGNYPDRCSIQAAFVTGGTDSSLITQAMFWPVLLGEQKLQMDKQ
ECCCCEEEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHH
HFYESEIAALGPVTHIRFNIIPDGGVSRLRLWGTLAS
HHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA