| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475926
Identifier: 186475926
GI number: 186475926
Start: 1301894
End: 1302964
Strand: Direct
Name: 186475926
Synonym: Bphy_1161
Alternate gene names: NA
Gene position: 1301894-1302964 (Clockwise)
Preceding gene: 186475925
Following gene: 186475930
Centisome position: 37.42
GC content: 65.27
Gene sequence:
>1071_bases ATGCAAGCCGATTTGCCGCAAGCACTGAAAGAAGCGATCCAGTTTTCGATCGATCACGAATCGCCGTGGGACCGCAATGC CGATGGCAAGTTCGGCGTACATGTGAACGACCCGCCGCCGTGGAATCGCCTGCTCGGGCCGATTCACGACCGGGGGCCGG TATCGGGTGCAGTGGCCGTCGATGGCCGGCTGCTTGCGACATGGGGCGAACCGGATCGCGCCGACCTGACCTTCAGCATC GCAAAGACGTATCTCGCGCTGCTGGCCGGCGTCGCGCACGATCGCGGCCTGCTGCCCGATCCCGACGAGCCGGTGCGTGT GCGCGTGCCGGGCGTCGGTTTCGACGACGAGCACAATGCGCCCATCACATGGACGCACCTGCTGCAACAGACGAGCGAAT GGCAAGGCACGTGCTTCGGCTTGTCCGATCAGGCGGATCACTATCGCGCGGTGACCTTCGGCGATCCGCCCGCCGGCCGC AAAGGCGAGCCGCGCGGGCTGCAACCGCCGGGTACGTACTGGGAATACAACGACGTACGCATCAATCAGTTGTCGCTCGC GCTGCTGCATCTGCTCGGCAGGCCTTTGCCCGATGTGTTCCGCGAAGCTATCATACGGCCCGTGGGCGCAAGCGAGCACT GGCAATGGGTCGGCTATGACGACGCGTGGCTCGACCTCGGCGGCCGCCGTGTGCAGTCGGTGCCAGGCGGCTCGCACTGG GGCGGCGGCATGTCGGTGAGCGCGAACGATCAGTTGAAAGTCGCGCAGATGCTGCTCGACGACGGGCTTGCCGACGGACG CCGCGTGCTATCGGCTGAATGGATCGCGCGGATGCGCGCGCCGTGCACGCTCGCGCCGTACTACGGGTATCTGGTGTGGC TTAATACTTCGCGGCGGGTGTTTCCCGCCGTGCCGGAATCGAGTTACTTCGGCGTCGGCGCGGGCAGTTCGTTCATGTGG ATCGAGCCGGAGCGGCGCATCGCGCTGATCGTGCGTTGGCTCGATTCGCAGTTCGCGGACGCGTTCTTCGGGAAGGTGCT GAACGCCATCGAGACAGTGTGTTCGCGATAG
Upstream 100 bases:
>100_bases ATCTGATGATGGCGGCCGTCATCAGCCTGCTGACCCTGGTCTGGGCGCGGGCGCGGCTGAACGCACACTGAATCGAATGA ATCACGAGGGACGCGCACGT
Downstream 100 bases:
>100_bases CGCTGCACGCGCCCGACGGCATGCGCTAGATCGCCCGCGCGACGATCAACGGGTCGACCGCACCGATCACGTCGAGGTTG CGATTCGCATACGGCAGCTT
Product: beta-lactamase
Products: NA
Alternate protein names: Secreted Beta-Lactamase Family Protein; Beta-Lactamase Family
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MQADLPQALKEAIQFSIDHESPWDRNADGKFGVHVNDPPPWNRLLGPIHDRGPVSGAVAVDGRLLATWGEPDRADLTFSI AKTYLALLAGVAHDRGLLPDPDEPVRVRVPGVGFDDEHNAPITWTHLLQQTSEWQGTCFGLSDQADHYRAVTFGDPPAGR KGEPRGLQPPGTYWEYNDVRINQLSLALLHLLGRPLPDVFREAIIRPVGASEHWQWVGYDDAWLDLGGRRVQSVPGGSHW GGGMSVSANDQLKVAQMLLDDGLADGRRVLSAEWIARMRAPCTLAPYYGYLVWLNTSRRVFPAVPESSYFGVGAGSSFMW IEPERRIALIVRWLDSQFADAFFGKVLNAIETVCSR
Sequences:
>Translated_356_residues MQADLPQALKEAIQFSIDHESPWDRNADGKFGVHVNDPPPWNRLLGPIHDRGPVSGAVAVDGRLLATWGEPDRADLTFSI AKTYLALLAGVAHDRGLLPDPDEPVRVRVPGVGFDDEHNAPITWTHLLQQTSEWQGTCFGLSDQADHYRAVTFGDPPAGR KGEPRGLQPPGTYWEYNDVRINQLSLALLHLLGRPLPDVFREAIIRPVGASEHWQWVGYDDAWLDLGGRRVQSVPGGSHW GGGMSVSANDQLKVAQMLLDDGLADGRRVLSAEWIARMRAPCTLAPYYGYLVWLNTSRRVFPAVPESSYFGVGAGSSFMW IEPERRIALIVRWLDSQFADAFFGKVLNAIETVCSR >Mature_356_residues MQADLPQALKEAIQFSIDHESPWDRNADGKFGVHVNDPPPWNRLLGPIHDRGPVSGAVAVDGRLLATWGEPDRADLTFSI AKTYLALLAGVAHDRGLLPDPDEPVRVRVPGVGFDDEHNAPITWTHLLQQTSEWQGTCFGLSDQADHYRAVTFGDPPAGR KGEPRGLQPPGTYWEYNDVRINQLSLALLHLLGRPLPDVFREAIIRPVGASEHWQWVGYDDAWLDLGGRRVQSVPGGSHW GGGMSVSANDQLKVAQMLLDDGLADGRRVLSAEWIARMRAPCTLAPYYGYLVWLNTSRRVFPAVPESSYFGVGAGSSFMW IEPERRIALIVRWLDSQFADAFFGKVLNAIETVCSR
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39451; Mature: 39451
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQADLPQALKEAIQFSIDHESPWDRNADGKFGVHVNDPPPWNRLLGPIHDRGPVSGAVAV CCCCHHHHHHHHHHEECCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCEEEE DGRLLATWGEPDRADLTFSIAKTYLALLAGVAHDRGLLPDPDEPVRVRVPGVGFDDEHNA CCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCC PITWTHLLQQTSEWQGTCFGLSDQADHYRAVTFGDPPAGRKGEPRGLQPPGTYWEYNDVR CCHHHHHHHHCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCEE INQLSLALLHLLGRPLPDVFREAIIRPVGASEHWQWVGYDDAWLDLGGRRVQSVPGGSHW EHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCEEECCCCCCCC GGGMSVSANDQLKVAQMLLDDGLADGRRVLSAEWIARMRAPCTLAPYYGYLVWLNTSRRV CCCEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCEE FPAVPESSYFGVGAGSSFMWIEPERRIALIVRWLDSQFADAFFGKVLNAIETVCSR EECCCCCCEEECCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQADLPQALKEAIQFSIDHESPWDRNADGKFGVHVNDPPPWNRLLGPIHDRGPVSGAVAV CCCCHHHHHHHHHHEECCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCEEEE DGRLLATWGEPDRADLTFSIAKTYLALLAGVAHDRGLLPDPDEPVRVRVPGVGFDDEHNA CCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCC PITWTHLLQQTSEWQGTCFGLSDQADHYRAVTFGDPPAGRKGEPRGLQPPGTYWEYNDVR CCHHHHHHHHCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCEE INQLSLALLHLLGRPLPDVFREAIIRPVGASEHWQWVGYDDAWLDLGGRRVQSVPGGSHW EHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCEEECCCCCCCC GGGMSVSANDQLKVAQMLLDDGLADGRRVLSAEWIARMRAPCTLAPYYGYLVWLNTSRRV CCCEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCEE FPAVPESSYFGVGAGSSFMWIEPERRIALIVRWLDSQFADAFFGKVLNAIETVCSR EECCCCCCEEECCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA