| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475836
Identifier: 186475836
GI number: 186475836
Start: 1203717
End: 1204817
Strand: Reverse
Name: 186475836
Synonym: Bphy_1071
Alternate gene names: NA
Gene position: 1204817-1203717 (Counterclockwise)
Preceding gene: 186475840
Following gene: 186475835
Centisome position: 34.63
GC content: 64.85
Gene sequence:
>1101_bases ATGACAGTCAGCACCCTGCCCGCCACGTCTTCGCATCACCGACGCATCGTTCAGCTCGACGGCCTGCGCGCGATCGCCGT GCTCGCCGTCTTCGCACAGCACGCGCTGAAGGCGCCGCTGTGGATGGGCGTCGACCTGTTCTTCGTGCTGAGCGGCTTTC TGATCACGGGCATCCTGCTCGAACGCAAGGCGCGGCAGCAGTCGTATTTCAGCTACTTCTATGCGCGCCGTGTGCGGCGC ATCCTGCCGCCGTATCTGCTGCTGATGCTGGTGTCGTCGCTGTTGTTCGGCCTGGGCTGGGCGCAGCACTGGCCGTGGTA CGCATTTTTTGCGACGAACGTCGCCGATGCCCTCGGCCAAAGCGGTCACGACAGCCTGAATGTGCTGTGGTCGCTCGCGG TCGAAGAGCAGTTCTATATCTTCTGGCCGTTCGTGATCCTGCTCGTGCCCGAGCGGTGGGTCGGATATGTCGCGGCTGCG CTGATTCTGTTCGTCCCGGTGCTGCGCGCTGTCGCGACGCCGTGGTTCGATTCGTTCTGGCCAATCTATTACCTGACGCC GTTCCGCATGGATCTGCTCGCGGCAGGCGCGCTGCTCGCCGTCGCCGTGCGGCGCGATGCGAATGCGCTGGCGCCGTTCA AGGCGCCCGCCGCGCTCGGCATCTGCGCGGCGCTCGCCGTGCTCGCGTGGCTGCATCTGCATTACCCGCGTTTTCGCGCG GCCAATACGCCGCTGTCGAATGCTGGCCTGTATAGCGTGTCGCTTGTGCTGTGCACGTCGATCGTCGTGATCGCGCTGCA GAGCAAAGGCATCGTCAAGCGCGTGCTGTGCAACCCGATGCTCGTCTATATCGGCACGATCAGCTACACGATCTATCTGA TCCACCTGAGCGTTCTCTACGTGCTCTGGCCGCTGCACACGAACCGCTACGTGACGGCTGCGCTGGCACTGGCGATCACG CTCGCGTATGCCAGCGCGTCGTGGTTCGGCTTCGAGCGGCGCCTGATTCACGGCAGCGCGTCGCCGGGCCGCCGGCCGCA TGAAGAAGAACGCGAGACACCGCTGCACGCGGCGCGCGAAGCCTCGAGGACGAGCGCTTGA
Upstream 100 bases:
>100_bases TACCTACAATAAAACCCGTTTTTGCCGTCTTCATGGTGATCGCCTTGCGACACCGTGCATGGCCCTTCGAATGCCGCATC AGGCGCATACACGGACGCTC
Downstream 100 bases:
>100_bases AGCCCGCCTCGATGCGCCGCGCGGCGCTTTGCGCGCTGGCCGTCGCCGCGACGTTGGCGAGCGCCGATGAACGCACACGC ACGCCCTCGCAGTCGTCAGT
Product: acyltransferase 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MTVSTLPATSSHHRRIVQLDGLRAIAVLAVFAQHALKAPLWMGVDLFFVLSGFLITGILLERKARQQSYFSYFYARRVRR ILPPYLLLMLVSSLLFGLGWAQHWPWYAFFATNVADALGQSGHDSLNVLWSLAVEEQFYIFWPFVILLVPERWVGYVAAA LILFVPVLRAVATPWFDSFWPIYYLTPFRMDLLAAGALLAVAVRRDANALAPFKAPAALGICAALAVLAWLHLHYPRFRA ANTPLSNAGLYSVSLVLCTSIVVIALQSKGIVKRVLCNPMLVYIGTISYTIYLIHLSVLYVLWPLHTNRYVTAALALAIT LAYASASWFGFERRLIHGSASPGRRPHEEERETPLHAAREASRTSA
Sequences:
>Translated_366_residues MTVSTLPATSSHHRRIVQLDGLRAIAVLAVFAQHALKAPLWMGVDLFFVLSGFLITGILLERKARQQSYFSYFYARRVRR ILPPYLLLMLVSSLLFGLGWAQHWPWYAFFATNVADALGQSGHDSLNVLWSLAVEEQFYIFWPFVILLVPERWVGYVAAA LILFVPVLRAVATPWFDSFWPIYYLTPFRMDLLAAGALLAVAVRRDANALAPFKAPAALGICAALAVLAWLHLHYPRFRA ANTPLSNAGLYSVSLVLCTSIVVIALQSKGIVKRVLCNPMLVYIGTISYTIYLIHLSVLYVLWPLHTNRYVTAALALAIT LAYASASWFGFERRLIHGSASPGRRPHEEERETPLHAAREASRTSA >Mature_365_residues TVSTLPATSSHHRRIVQLDGLRAIAVLAVFAQHALKAPLWMGVDLFFVLSGFLITGILLERKARQQSYFSYFYARRVRRI LPPYLLLMLVSSLLFGLGWAQHWPWYAFFATNVADALGQSGHDSLNVLWSLAVEEQFYIFWPFVILLVPERWVGYVAAAL ILFVPVLRAVATPWFDSFWPIYYLTPFRMDLLAAGALLAVAVRRDANALAPFKAPAALGICAALAVLAWLHLHYPRFRAA NTPLSNAGLYSVSLVLCTSIVVIALQSKGIVKRVLCNPMLVYIGTISYTIYLIHLSVLYVLWPLHTNRYVTAALALAITL AYASASWFGFERRLIHGSASPGRRPHEEERETPLHAAREASRTSA
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
Organism=Caenorhabditis elegans, GI17507283, Length=331, Percent_Identity=29.9093655589124, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17507167, Length=359, Percent_Identity=27.8551532033426, Blast_Score=81, Evalue=8e-16, Organism=Caenorhabditis elegans, GI133903927, Length=343, Percent_Identity=24.4897959183673, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71984481, Length=151, Percent_Identity=31.7880794701987, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562866, Length=341, Percent_Identity=28.1524926686217, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562856, Length=329, Percent_Identity=27.0516717325228, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI86562056, Length=337, Percent_Identity=27.5964391691395, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17507733, Length=162, Percent_Identity=30.2469135802469, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193208625, Length=365, Percent_Identity=24.6575342465753, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71988046, Length=365, Percent_Identity=26.5753424657534, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17539118, Length=162, Percent_Identity=30.2469135802469, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115534354, Length=368, Percent_Identity=26.6304347826087, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 - InterPro: IPR013830 - InterPro: IPR013831 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 40940; Mature: 40808
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSTLPATSSHHRRIVQLDGLRAIAVLAVFAQHALKAPLWMGVDLFFVLSGFLITGILL CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ERKARQQSYFSYFYARRVRRILPPYLLLMLVSSLLFGLGWAQHWPWYAFFATNVADALGQ HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCC SGHDSLNVLWSLAVEEQFYIFWPFVILLVPERWVGYVAAALILFVPVLRAVATPWFDSFW CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC PIYYLTPFRMDLLAAGALLAVAVRRDANALAPFKAPAALGICAALAVLAWLHLHYPRFRA HHEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHC ANTPLSNAGLYSVSLVLCTSIVVIALQSKGIVKRVLCNPMLVYIGTISYTIYLIHLSVLY CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VLWPLHTNRYVTAALALAITLAYASASWFGFERRLIHGSASPGRRPHEEERETPLHAARE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHCCHHHHHHH ASRTSA HHCCCC >Mature Secondary Structure TVSTLPATSSHHRRIVQLDGLRAIAVLAVFAQHALKAPLWMGVDLFFVLSGFLITGILL CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ERKARQQSYFSYFYARRVRRILPPYLLLMLVSSLLFGLGWAQHWPWYAFFATNVADALGQ HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCC SGHDSLNVLWSLAVEEQFYIFWPFVILLVPERWVGYVAAALILFVPVLRAVATPWFDSFW CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC PIYYLTPFRMDLLAAGALLAVAVRRDANALAPFKAPAALGICAALAVLAWLHLHYPRFRA HHEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHC ANTPLSNAGLYSVSLVLCTSIVVIALQSKGIVKRVLCNPMLVYIGTISYTIYLIHLSVLY CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VLWPLHTNRYVTAALALAITLAYASASWFGFERRLIHGSASPGRRPHEEERETPLHAARE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHCCHHHHHHH ASRTSA HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA