Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475835

Identifier: 186475835

GI number: 186475835

Start: 1202926

End: 1203705

Strand: Reverse

Name: 186475835

Synonym: Bphy_1070

Alternate gene names: NA

Gene position: 1203705-1202926 (Counterclockwise)

Preceding gene: 186475836

Following gene: 186475834

Centisome position: 34.6

GC content: 65.38

Gene sequence:

>780_bases
ATGCGCCGCGCGGCGCTTTGCGCGCTGGCCGTCGCCGCGACGTTGGCGAGCGCCGATGAACGCACACGCACGCCCTCGCA
GTCGTCAGTGCTGGTCGAAGCATACGGCGACTCGACGACACTCGGCATCTCGTGCAGCGGCGGACATTGCGCGCCGTGCG
CCGACAACGCAGTGACGTATCTGCAGGAGCAACTACGCGCGAAGTATGGCGAGCGCGTGTACGTCGTCAACGACGGCGTC
GGCGGGACGATGGCGACGCAACTGCGCGACGGCACGGGGCCGGGGCGCAAAGGCGCGTGGAAAGACCGCCTCGCTGCATC
GATTGCGCAGATCGTCACGATCAACTACGGCATTAACGAAGTGATGCACAACCAGACGCCCGAGCAGTTCTATCTGGCTG
AAACGGATCTGGTGAAGACGGCGCAGGCCCTCGGCAAGCTGCCCGTGTTGCAGACGTCGAACCCCATGCCCGATGGCCGC
CTGAATGCGCGCCTCGCCGATATGGTCGCGATGACGCGGCGCGTCGCAGCCGAACAGCAGGTGCCCCTCGTCGATCACTA
CGCCGACATCTCCGCGATGGCCGACTGGAAAACGCATATGTCGGACGGCGCACATCCGAAGCCCGAGCTGTATCGCGTGA
AAGCGCGCGAGGACTTCCAGGTGATCGATCCGCTCGTGCGGCGCCTGCTCGGCGTGCCCGCGCTGTCGGAAGGCGAGACG
CCGCGTTCCCCTTCCCCTCCTCATTCAACTTCAGACAACCCGACGAGAGGCAACTCATGA

Upstream 100 bases:

>100_bases
GCAGCGCGTCGCCGGGCCGCCGGCCGCATGAAGAAGAACGCGAGACACCGCTGCACGCGGCGCGCGAAGCCTCGAGGACG
AGCGCTTGAAGCCCGCCTCG

Downstream 100 bases:

>100_bases
CCACACAACGCAAAGCCATCATCACAGGCGTATCCGGGCAGGACGGCGCCTATCTGACGAAGCTGCTGCTCAGCAAGGGC
TATCAGGTCACGGGCACGTA

Product: GDSL family lipase

Products: NA

Alternate protein names: GDSL Family Lipase; Conserved Protein

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MRRAALCALAVAATLASADERTRTPSQSSVLVEAYGDSTTLGISCSGGHCAPCADNAVTYLQEQLRAKYGERVYVVNDGV
GGTMATQLRDGTGPGRKGAWKDRLAASIAQIVTINYGINEVMHNQTPEQFYLAETDLVKTAQALGKLPVLQTSNPMPDGR
LNARLADMVAMTRRVAAEQQVPLVDHYADISAMADWKTHMSDGAHPKPELYRVKAREDFQVIDPLVRRLLGVPALSEGET
PRSPSPPHSTSDNPTRGNS

Sequences:

>Translated_259_residues
MRRAALCALAVAATLASADERTRTPSQSSVLVEAYGDSTTLGISCSGGHCAPCADNAVTYLQEQLRAKYGERVYVVNDGV
GGTMATQLRDGTGPGRKGAWKDRLAASIAQIVTINYGINEVMHNQTPEQFYLAETDLVKTAQALGKLPVLQTSNPMPDGR
LNARLADMVAMTRRVAAEQQVPLVDHYADISAMADWKTHMSDGAHPKPELYRVKAREDFQVIDPLVRRLLGVPALSEGET
PRSPSPPHSTSDNPTRGNS
>Mature_259_residues
MRRAALCALAVAATLASADERTRTPSQSSVLVEAYGDSTTLGISCSGGHCAPCADNAVTYLQEQLRAKYGERVYVVNDGV
GGTMATQLRDGTGPGRKGAWKDRLAASIAQIVTINYGINEVMHNQTPEQFYLAETDLVKTAQALGKLPVLQTSNPMPDGR
LNARLADMVAMTRRVAAEQQVPLVDHYADISAMADWKTHMSDGAHPKPELYRVKAREDFQVIDPLVRRLLGVPALSEGET
PRSPSPPHSTSDNPTRGNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27899; Mature: 27899

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAALCALAVAATLASADERTRTPSQSSVLVEAYGDSTTLGISCSGGHCAPCADNAVTY
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHH
LQEQLRAKYGERVYVVNDGVGGTMATQLRDGTGPGRKGAWKDRLAASIAQIVTINYGINE
HHHHHHHHHCCEEEEEECCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH
VMHNQTPEQFYLAETDLVKTAQALGKLPVLQTSNPMPDGRLNARLADMVAMTRRVAAEQQ
HHHCCCCCCEEEHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
VPLVDHYADISAMADWKTHMSDGAHPKPELYRVKAREDFQVIDPLVRRLLGVPALSEGET
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC
PRSPSPPHSTSDNPTRGNS
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRAALCALAVAATLASADERTRTPSQSSVLVEAYGDSTTLGISCSGGHCAPCADNAVTY
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHH
LQEQLRAKYGERVYVVNDGVGGTMATQLRDGTGPGRKGAWKDRLAASIAQIVTINYGINE
HHHHHHHHHCCEEEEEECCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH
VMHNQTPEQFYLAETDLVKTAQALGKLPVLQTSNPMPDGRLNARLADMVAMTRRVAAEQQ
HHHCCCCCCEEEHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
VPLVDHYADISAMADWKTHMSDGAHPKPELYRVKAREDFQVIDPLVRRLLGVPALSEGET
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC
PRSPSPPHSTSDNPTRGNS
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA