| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475835
Identifier: 186475835
GI number: 186475835
Start: 1202926
End: 1203705
Strand: Reverse
Name: 186475835
Synonym: Bphy_1070
Alternate gene names: NA
Gene position: 1203705-1202926 (Counterclockwise)
Preceding gene: 186475836
Following gene: 186475834
Centisome position: 34.6
GC content: 65.38
Gene sequence:
>780_bases ATGCGCCGCGCGGCGCTTTGCGCGCTGGCCGTCGCCGCGACGTTGGCGAGCGCCGATGAACGCACACGCACGCCCTCGCA GTCGTCAGTGCTGGTCGAAGCATACGGCGACTCGACGACACTCGGCATCTCGTGCAGCGGCGGACATTGCGCGCCGTGCG CCGACAACGCAGTGACGTATCTGCAGGAGCAACTACGCGCGAAGTATGGCGAGCGCGTGTACGTCGTCAACGACGGCGTC GGCGGGACGATGGCGACGCAACTGCGCGACGGCACGGGGCCGGGGCGCAAAGGCGCGTGGAAAGACCGCCTCGCTGCATC GATTGCGCAGATCGTCACGATCAACTACGGCATTAACGAAGTGATGCACAACCAGACGCCCGAGCAGTTCTATCTGGCTG AAACGGATCTGGTGAAGACGGCGCAGGCCCTCGGCAAGCTGCCCGTGTTGCAGACGTCGAACCCCATGCCCGATGGCCGC CTGAATGCGCGCCTCGCCGATATGGTCGCGATGACGCGGCGCGTCGCAGCCGAACAGCAGGTGCCCCTCGTCGATCACTA CGCCGACATCTCCGCGATGGCCGACTGGAAAACGCATATGTCGGACGGCGCACATCCGAAGCCCGAGCTGTATCGCGTGA AAGCGCGCGAGGACTTCCAGGTGATCGATCCGCTCGTGCGGCGCCTGCTCGGCGTGCCCGCGCTGTCGGAAGGCGAGACG CCGCGTTCCCCTTCCCCTCCTCATTCAACTTCAGACAACCCGACGAGAGGCAACTCATGA
Upstream 100 bases:
>100_bases GCAGCGCGTCGCCGGGCCGCCGGCCGCATGAAGAAGAACGCGAGACACCGCTGCACGCGGCGCGCGAAGCCTCGAGGACG AGCGCTTGAAGCCCGCCTCG
Downstream 100 bases:
>100_bases CCACACAACGCAAAGCCATCATCACAGGCGTATCCGGGCAGGACGGCGCCTATCTGACGAAGCTGCTGCTCAGCAAGGGC TATCAGGTCACGGGCACGTA
Product: GDSL family lipase
Products: NA
Alternate protein names: GDSL Family Lipase; Conserved Protein
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MRRAALCALAVAATLASADERTRTPSQSSVLVEAYGDSTTLGISCSGGHCAPCADNAVTYLQEQLRAKYGERVYVVNDGV GGTMATQLRDGTGPGRKGAWKDRLAASIAQIVTINYGINEVMHNQTPEQFYLAETDLVKTAQALGKLPVLQTSNPMPDGR LNARLADMVAMTRRVAAEQQVPLVDHYADISAMADWKTHMSDGAHPKPELYRVKAREDFQVIDPLVRRLLGVPALSEGET PRSPSPPHSTSDNPTRGNS
Sequences:
>Translated_259_residues MRRAALCALAVAATLASADERTRTPSQSSVLVEAYGDSTTLGISCSGGHCAPCADNAVTYLQEQLRAKYGERVYVVNDGV GGTMATQLRDGTGPGRKGAWKDRLAASIAQIVTINYGINEVMHNQTPEQFYLAETDLVKTAQALGKLPVLQTSNPMPDGR LNARLADMVAMTRRVAAEQQVPLVDHYADISAMADWKTHMSDGAHPKPELYRVKAREDFQVIDPLVRRLLGVPALSEGET PRSPSPPHSTSDNPTRGNS >Mature_259_residues MRRAALCALAVAATLASADERTRTPSQSSVLVEAYGDSTTLGISCSGGHCAPCADNAVTYLQEQLRAKYGERVYVVNDGV GGTMATQLRDGTGPGRKGAWKDRLAASIAQIVTINYGINEVMHNQTPEQFYLAETDLVKTAQALGKLPVLQTSNPMPDGR LNARLADMVAMTRRVAAEQQVPLVDHYADISAMADWKTHMSDGAHPKPELYRVKAREDFQVIDPLVRRLLGVPALSEGET PRSPSPPHSTSDNPTRGNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27899; Mature: 27899
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAALCALAVAATLASADERTRTPSQSSVLVEAYGDSTTLGISCSGGHCAPCADNAVTY CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHH LQEQLRAKYGERVYVVNDGVGGTMATQLRDGTGPGRKGAWKDRLAASIAQIVTINYGINE HHHHHHHHHCCEEEEEECCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH VMHNQTPEQFYLAETDLVKTAQALGKLPVLQTSNPMPDGRLNARLADMVAMTRRVAAEQQ HHHCCCCCCEEEHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC VPLVDHYADISAMADWKTHMSDGAHPKPELYRVKAREDFQVIDPLVRRLLGVPALSEGET CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC PRSPSPPHSTSDNPTRGNS CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRAALCALAVAATLASADERTRTPSQSSVLVEAYGDSTTLGISCSGGHCAPCADNAVTY CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHH LQEQLRAKYGERVYVVNDGVGGTMATQLRDGTGPGRKGAWKDRLAASIAQIVTINYGINE HHHHHHHHHCCEEEEEECCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH VMHNQTPEQFYLAETDLVKTAQALGKLPVLQTSNPMPDGRLNARLADMVAMTRRVAAEQQ HHHCCCCCCEEEHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC VPLVDHYADISAMADWKTHMSDGAHPKPELYRVKAREDFQVIDPLVRRLLGVPALSEGET CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC PRSPSPPHSTSDNPTRGNS CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA