Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475711

Identifier: 186475711

GI number: 186475711

Start: 1056378

End: 1058135

Strand: Reverse

Name: 186475711

Synonym: Bphy_0946

Alternate gene names: NA

Gene position: 1058135-1056378 (Counterclockwise)

Preceding gene: 186475712

Following gene: 186475710

Centisome position: 30.41

GC content: 65.81

Gene sequence:

>1758_bases
ATGAGATCTGTCGTTCGCCTCACAGCCTCCGCCACCAGTGCGCTGCCGCGCTGGATGCTGCTTACCATCTGCGTCGTGTA
CGCGTCGTTCGGCCTGTTCGGACGCGACCCGTGGAAGAACGAAGACGCAGCCGGCTTCGGCGTCATGTGGACGATGGCCA
ACGGTTCGCTGCACGACTGGCTGCTGCCGAATCTGGTCGGCAAGTACATGACGTCCGACGCGCCGCTCGGCTACTGGCTC
GGCGCCGGCGCGATACGCGTGCTCGATCCGCTTGTGGACGCAAGCAATGCGTCGCGCGTATTCACGGGCTTGCTGTTCTG
CGCGGCGTGCGCGTTCGTCTGGTATGCAGCCTACCTGCTAGGCCGCCGCCCGGAAGTGCAGCCCTTCAAGTACGCGTTCG
GCGGCGAGCCCGAACCGCGCGACTACGGGCGCACGCTCGCCGACGGCGCGCTGCTGATCCTGCTGGCCACCTTTGGTCTC
GCCGAGCGCGGCCACGAAACCACGCCGCAGATCACGCAGTTCGTCTGCATCGCGATGCTTGTCTACGGCCTCGTGCGGAC
GATCGACAAGCCCGTCCAGGGTGCACTCATCTGGGGCTGCGCGATCGGCCTCGTGACGCTGACGAGCAGTCCCGTGCTGG
TCGGCGCCCTGCTGATCGGCACCTTCGCGATGATGCTGATCGTGCACGACACGCACTGGCGCACCTTGATGCTCGCGGGC
TTGCCCGTTGCGCTCGCGCTGTCGGTGGTGTGGCCGCTCACCGCGATCGCCCTGTTCCCTGACGATGCCGTCTGGTTCCT
GCATCAATGGATGCGCGGCAGCCTGCACACGTTCCAGGGACCGTACGGATCGACGCTGCGCTACGCCGTCAAGAACCTGC
CGCTCTTCACCTGGCCCGCATGGCCGCTCGCGATCTGGGCATGGTTCAGCTGGGCCGGCCTGCGCCGCGCGCCGCATGTG
GCGATTCCGCTGTCCGTGATCGCGCCGCTGCTGGTTCTCGTCGTGCTGCAAAGCCAGGGCACGAACCGCCTCTATATGCT
GCTGACGCCCGCGCTTGCCGTGATTGCCGCGTTCGCGCTGCCCACGCTCAAGCGCGGCGCGATCAACGCGATCGACTGGT
TCGCGGTGCTGAGCTTCACGGTGCTCGGCACGTTCGTTTGGCTGGTGTGGCTCGCCGGCATGACGGGCTATCCGCATCAG
CTCGCACGCAATCTCTCGCGTCTCGCGCCGGGCTTCACGCCGCAGTTCAAGATTCTGTCGTTCGTCTGTGCGGTCGCGGT
GACCGTGTGCTGGTTTGCGCTCGTCCAGTGGCGCGTGGCGCGGCATCCGAAGGTGCTGTGGCGCAGCGTCGTGCTGTCGA
GCGCGGGCACGACGCTGATGTGGGTGCTGCTGATGACACTGTGGCTGCCCGTCGTCAATTACAGCCGTACCTATAAGGAC
GTCGCCCAGCAGATCGCCGCGCATCTGCCGTCCGACTACAATTGCATCTCCCCCGTGCGGCTCGGCGACGCACAGATCGC
CACTTTCGCCTATTTCGGCGACATGCATTTTTCGTTCGATGACGACTGCGACGTGATCCTGCGTCAGGACACGCAGGACT
TCGGCGAGCCGAGCGCGATGTCAAACTTCGTCTGGAAGCTCGTCTGGGAAGGCCGCCGTGTGGCCGACCGCGACGAACGT
TTCCGCCTGTACGTGCGCATCGACCGTCCGCAACCGCCCGTCAAGCGCCGTCCGTGGCGTCCGAAGAAAAGCGGCTGA

Upstream 100 bases:

>100_bases
CGCCGCCCGTCTACAATGCCGCATGCCCGAACATGCGACGCCTCCCGCGCTGCGCCAATAAATCACGGCTGCCGCCCTCG
CAGCCCCATACGAACACCGC

Downstream 100 bases:

>100_bases
GCATGTTTGACGATGTGCGGAAAATCGCCGGGCTCGCGTGGCCCGTGCTGATCGGCCAGCTGGCGATCATCGCGTTCGGC
GTGATCGATACAGCGATGGT

Product: putative inner membrane protein

Products: NA

Alternate protein names: Transmembrane Protein; Inner Membrane Protein; Glycosyl Transferase Family Protein; Glycosyltransferase; 4-Amino-4-Deoxy-L-Arabinose Transferase; Glycosyl Transferase Family; PMT Family Glycosyltransferase; Glycosyltransferase Pmt Family

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MRSVVRLTASATSALPRWMLLTICVVYASFGLFGRDPWKNEDAAGFGVMWTMANGSLHDWLLPNLVGKYMTSDAPLGYWL
GAGAIRVLDPLVDASNASRVFTGLLFCAACAFVWYAAYLLGRRPEVQPFKYAFGGEPEPRDYGRTLADGALLILLATFGL
AERGHETTPQITQFVCIAMLVYGLVRTIDKPVQGALIWGCAIGLVTLTSSPVLVGALLIGTFAMMLIVHDTHWRTLMLAG
LPVALALSVVWPLTAIALFPDDAVWFLHQWMRGSLHTFQGPYGSTLRYAVKNLPLFTWPAWPLAIWAWFSWAGLRRAPHV
AIPLSVIAPLLVLVVLQSQGTNRLYMLLTPALAVIAAFALPTLKRGAINAIDWFAVLSFTVLGTFVWLVWLAGMTGYPHQ
LARNLSRLAPGFTPQFKILSFVCAVAVTVCWFALVQWRVARHPKVLWRSVVLSSAGTTLMWVLLMTLWLPVVNYSRTYKD
VAQQIAAHLPSDYNCISPVRLGDAQIATFAYFGDMHFSFDDDCDVILRQDTQDFGEPSAMSNFVWKLVWEGRRVADRDER
FRLYVRIDRPQPPVKRRPWRPKKSG

Sequences:

>Translated_585_residues
MRSVVRLTASATSALPRWMLLTICVVYASFGLFGRDPWKNEDAAGFGVMWTMANGSLHDWLLPNLVGKYMTSDAPLGYWL
GAGAIRVLDPLVDASNASRVFTGLLFCAACAFVWYAAYLLGRRPEVQPFKYAFGGEPEPRDYGRTLADGALLILLATFGL
AERGHETTPQITQFVCIAMLVYGLVRTIDKPVQGALIWGCAIGLVTLTSSPVLVGALLIGTFAMMLIVHDTHWRTLMLAG
LPVALALSVVWPLTAIALFPDDAVWFLHQWMRGSLHTFQGPYGSTLRYAVKNLPLFTWPAWPLAIWAWFSWAGLRRAPHV
AIPLSVIAPLLVLVVLQSQGTNRLYMLLTPALAVIAAFALPTLKRGAINAIDWFAVLSFTVLGTFVWLVWLAGMTGYPHQ
LARNLSRLAPGFTPQFKILSFVCAVAVTVCWFALVQWRVARHPKVLWRSVVLSSAGTTLMWVLLMTLWLPVVNYSRTYKD
VAQQIAAHLPSDYNCISPVRLGDAQIATFAYFGDMHFSFDDDCDVILRQDTQDFGEPSAMSNFVWKLVWEGRRVADRDER
FRLYVRIDRPQPPVKRRPWRPKKSG
>Mature_585_residues
MRSVVRLTASATSALPRWMLLTICVVYASFGLFGRDPWKNEDAAGFGVMWTMANGSLHDWLLPNLVGKYMTSDAPLGYWL
GAGAIRVLDPLVDASNASRVFTGLLFCAACAFVWYAAYLLGRRPEVQPFKYAFGGEPEPRDYGRTLADGALLILLATFGL
AERGHETTPQITQFVCIAMLVYGLVRTIDKPVQGALIWGCAIGLVTLTSSPVLVGALLIGTFAMMLIVHDTHWRTLMLAG
LPVALALSVVWPLTAIALFPDDAVWFLHQWMRGSLHTFQGPYGSTLRYAVKNLPLFTWPAWPLAIWAWFSWAGLRRAPHV
AIPLSVIAPLLVLVVLQSQGTNRLYMLLTPALAVIAAFALPTLKRGAINAIDWFAVLSFTVLGTFVWLVWLAGMTGYPHQ
LARNLSRLAPGFTPQFKILSFVCAVAVTVCWFALVQWRVARHPKVLWRSVVLSSAGTTLMWVLLMTLWLPVVNYSRTYKD
VAQQIAAHLPSDYNCISPVRLGDAQIATFAYFGDMHFSFDDDCDVILRQDTQDFGEPSAMSNFVWKLVWEGRRVADRDER
FRLYVRIDRPQPPVKRRPWRPKKSG

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65293; Mature: 65293

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSVVRLTASATSALPRWMLLTICVVYASFGLFGRDPWKNEDAAGFGVMWTMANGSLHDW
CCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHH
LLPNLVGKYMTSDAPLGYWLGAGAIRVLDPLVDASNASRVFTGLLFCAACAFVWYAAYLL
HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GRRPEVQPFKYAFGGEPEPRDYGRTLADGALLILLATFGLAERGHETTPQITQFVCIAML
CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VYGLVRTIDKPVQGALIWGCAIGLVTLTSSPVLVGALLIGTFAMMLIVHDTHWRTLMLAG
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
LPVALALSVVWPLTAIALFPDDAVWFLHQWMRGSLHTFQGPYGSTLRYAVKNLPLFTWPA
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEECCH
WPLAIWAWFSWAGLRRAPHVAIPLSVIAPLLVLVVLQSQGTNRLYMLLTPALAVIAAFAL
HHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH
PTLKRGAINAIDWFAVLSFTVLGTFVWLVWLAGMTGYPHQLARNLSRLAPGFTPQFKILS
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHH
FVCAVAVTVCWFALVQWRVARHPKVLWRSVVLSSAGTTLMWVLLMTLWLPVVNYSRTYKD
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHH
VAQQIAAHLPSDYNCISPVRLGDAQIATFAYFGDMHFSFDDDCDVILRQDTQDFGEPSAM
HHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEECCEECCCCCCCCHHEECCCHHCCCCHHH
SNFVWKLVWEGRRVADRDERFRLYVRIDRPQPPVKRRPWRPKKSG
HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSVVRLTASATSALPRWMLLTICVVYASFGLFGRDPWKNEDAAGFGVMWTMANGSLHDW
CCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHH
LLPNLVGKYMTSDAPLGYWLGAGAIRVLDPLVDASNASRVFTGLLFCAACAFVWYAAYLL
HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GRRPEVQPFKYAFGGEPEPRDYGRTLADGALLILLATFGLAERGHETTPQITQFVCIAML
CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VYGLVRTIDKPVQGALIWGCAIGLVTLTSSPVLVGALLIGTFAMMLIVHDTHWRTLMLAG
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
LPVALALSVVWPLTAIALFPDDAVWFLHQWMRGSLHTFQGPYGSTLRYAVKNLPLFTWPA
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEECCH
WPLAIWAWFSWAGLRRAPHVAIPLSVIAPLLVLVVLQSQGTNRLYMLLTPALAVIAAFAL
HHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH
PTLKRGAINAIDWFAVLSFTVLGTFVWLVWLAGMTGYPHQLARNLSRLAPGFTPQFKILS
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHH
FVCAVAVTVCWFALVQWRVARHPKVLWRSVVLSSAGTTLMWVLLMTLWLPVVNYSRTYKD
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHH
VAQQIAAHLPSDYNCISPVRLGDAQIATFAYFGDMHFSFDDDCDVILRQDTQDFGEPSAM
HHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEECCEECCCCCCCCHHEECCCHHCCCCHHH
SNFVWKLVWEGRRVADRDERFRLYVRIDRPQPPVKRRPWRPKKSG
HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA