Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is ylaK [H]

Identifier: 186475685

GI number: 186475685

Start: 1021327

End: 1023147

Strand: Reverse

Name: ylaK [H]

Synonym: Bphy_0920

Alternate gene names: 186475685

Gene position: 1023147-1021327 (Counterclockwise)

Preceding gene: 186475686

Following gene: 186475684

Centisome position: 29.41

GC content: 64.2

Gene sequence:

>1821_bases
ATGCCTTTGCCTACCCCCCCCAGCAAGCTCGGCAATCTGTTGCCGCCTGATGAATACACGGCGAAGCCTGCAAAGCCTGG
TCGAAAACAGGCACAAGAAGGGGAGCAAGCCGCATCGGCCGAATATGGCCGCGCCAATGTTGCCGCACCGATGACGCACG
CCGCGAACGCGGCCACCACGCTGCGCCCCGTTCCGAACGCCGCCCCCGCTGTTGCAGAAGCCACGCCGTCGCGCAGCCGC
AAGACGAAGCAGACGGCTGCCCTGCTGCAGCCGGTGCCCGCTGCGCCTGCCGCCGACGCGCAAGCGGCAGCCCCCATCGT
CGCGCGCCGCGGCAAGGGTTCCGCCGAAGCGGAAGCGCCCGCCGCCGCAGCCGCCAAGACGGTGCGCCCGGCCACCAAGA
AAGACTCGGCCAAGGGCGCGCAGGTCGAGATCCGCAAGCTGTTCGTACTCGACACCAACGTGCTGATGCACGATCCGACC
TGCCTGTTCCGCTTCGAGGAACACGACGTCTATCTGCCCATGATGACGTTGGAAGAACTCGACAATCACAAGAAGGGGAT
GTCGGAAGTCGCCCGCAACGCGCGCCAGGTGAGCCGCACGCTGGATACGCTCGTCGCGAACGCAGGCGAGATGTCGGAAG
GCATTCCCCTTGCGCGTCTGGGCAGCCGCGAAGCGCTGGGGCGCCTGTACTTCCAGACGAAGCTCACACATATCGAGCCC
GTCGAAGGCCTGCCGCAGGGCAAGGCCGACAACCAGATTCTCGGCGTCGTGCGCGCGCTGCAGCGTGACCGGCAGGATCG
CCAGGTCGTGCTGGTGTCGAAAGACATCAACATGCGTATCAAGGCGCACGCGCTCGGCCTGCCCGCCGAAGACTACTTCA
ACGACCAGGTTCTCGAAGACAAGGATCTGCTCTATTCCGGCATCCGTCAGCTGCCGCCCGACTTCTGGACGAAGCACGCG
AAGGACATGGAGAGCTGGCAGGACACGAAAACGGGCACTACGTATTACCGCGTGACGGGCCCGCTGTGCGCGTCGATGCT
GGTCAACGAGTTCGTCTATCTCGAGCCGCAGAACGGCGAGCCCGCGTTTCACGCCATCGTGCGCGAACTGAACGGCAAGA
CGGCGCTACTGCAGACGCTGCGCGACTACGGCCACCACAAGAACAATGTGTGGGGCATCACGGCGCGCAATCGCGAGCAG
AACTTCGCGCTGAACCTGCTGATGAACCCGGAGATCGACTTCGTCACGCTGCTCGGCCAGGCCGGCACGGGCAAGACACT
CGTCGCGCTCGCGGCGGGCCTCGCGCAGGTGCTCGACGACAAGCGCTACAACGAAATCATCGTGACGCGCGCGACGGTTC
CCGTCGGCGAAGACATCGGCTTCCTGCCCGGCACGGAAGAGGAAAAGATGCAGCCGTGGATGGGTGCATTCGACGACAAT
CTCGAAGTGCTTCAGAAGACGGATGACGCGGCAGGCGAATGGGGCCGCGCGGCGACGCAGGAACTGATCCGCTCGCGCCT
GAAGATCAAGAGCATGAACTTCATGCGCGGCCGCACGTTCGTCGACAAGTATCTGATCATCGACGAGGCGCAGAACCTGA
CGCCGAAGCAGATGAAGACGCTCGTGACGCGCGCGGGCCCGGGCACCAAGATCATCTGTCTCGGCAACATCGCGCAGATC
GATACGCCGTATCTGACGGAAGGCAGTTCAGGCCTCACGTATGTCGTCGATCGCTTCAAGGGCTGGGCGCACAGCGGTCA
TGTGACGCTCGCGCGCGGCGAGCGCTCGCGTCTCGCGGATTACGCGTCGGATATTCTGTAA

Upstream 100 bases:

>100_bases
AATCCGACACGCGCCACCGGACGCAAATTGCGAGCGCACGACGCACGACAGTTTGCGGCAGGCGGCGAAGAATTGTGACC
CGCTTTATTTGAGGGAAACC

Downstream 100 bases:

>100_bases
CGCCCTTCTTTGCGCTGTTCCAGGCCGCTTCCGGTGACGCCGGCAGCGGCTTTTTCATGCGCGCCGCGCACGCAAATTAT
GCCCACCGCATCGTTCCACG

Product: PhoH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 606; Mature: 605

Protein sequence:

>606_residues
MPLPTPPSKLGNLLPPDEYTAKPAKPGRKQAQEGEQAASAEYGRANVAAPMTHAANAATTLRPVPNAAPAVAEATPSRSR
KTKQTAALLQPVPAAPAADAQAAAPIVARRGKGSAEAEAPAAAAAKTVRPATKKDSAKGAQVEIRKLFVLDTNVLMHDPT
CLFRFEEHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDTLVANAGEMSEGIPLARLGSREALGRLYFQTKLTHIEP
VEGLPQGKADNQILGVVRALQRDRQDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDKDLLYSGIRQLPPDFWTKHA
KDMESWQDTKTGTTYYRVTGPLCASMLVNEFVYLEPQNGEPAFHAIVRELNGKTALLQTLRDYGHHKNNVWGITARNREQ
NFALNLLMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDN
LEVLQKTDDAAGEWGRAATQELIRSRLKIKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKTLVTRAGPGTKIICLGNIAQI
DTPYLTEGSSGLTYVVDRFKGWAHSGHVTLARGERSRLADYASDIL

Sequences:

>Translated_606_residues
MPLPTPPSKLGNLLPPDEYTAKPAKPGRKQAQEGEQAASAEYGRANVAAPMTHAANAATTLRPVPNAAPAVAEATPSRSR
KTKQTAALLQPVPAAPAADAQAAAPIVARRGKGSAEAEAPAAAAAKTVRPATKKDSAKGAQVEIRKLFVLDTNVLMHDPT
CLFRFEEHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDTLVANAGEMSEGIPLARLGSREALGRLYFQTKLTHIEP
VEGLPQGKADNQILGVVRALQRDRQDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDKDLLYSGIRQLPPDFWTKHA
KDMESWQDTKTGTTYYRVTGPLCASMLVNEFVYLEPQNGEPAFHAIVRELNGKTALLQTLRDYGHHKNNVWGITARNREQ
NFALNLLMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDN
LEVLQKTDDAAGEWGRAATQELIRSRLKIKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKTLVTRAGPGTKIICLGNIAQI
DTPYLTEGSSGLTYVVDRFKGWAHSGHVTLARGERSRLADYASDIL
>Mature_605_residues
PLPTPPSKLGNLLPPDEYTAKPAKPGRKQAQEGEQAASAEYGRANVAAPMTHAANAATTLRPVPNAAPAVAEATPSRSRK
TKQTAALLQPVPAAPAADAQAAAPIVARRGKGSAEAEAPAAAAAKTVRPATKKDSAKGAQVEIRKLFVLDTNVLMHDPTC
LFRFEEHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDTLVANAGEMSEGIPLARLGSREALGRLYFQTKLTHIEPV
EGLPQGKADNQILGVVRALQRDRQDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDKDLLYSGIRQLPPDFWTKHAK
DMESWQDTKTGTTYYRVTGPLCASMLVNEFVYLEPQNGEPAFHAIVRELNGKTALLQTLRDYGHHKNNVWGITARNREQN
FALNLLMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNL
EVLQKTDDAAGEWGRAATQELIRSRLKIKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKTLVTRAGPGTKIICLGNIAQID
TPYLTEGSSGLTYVVDRFKGWAHSGHVTLARGERSRLADYASDIL

Specific function: Unknown

COG id: COG1875

COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PINc domain [H]

Homologues:

Organism=Escherichia coli, GI1787257, Length=191, Percent_Identity=37.17277486911, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI145693103, Length=260, Percent_Identity=30.7692307692308, Blast_Score=92, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003714
- InterPro:   IPR006596 [H]

Pfam domain/function: PF02562 PhoH [H]

EC number: NA

Molecular weight: Translated: 66424; Mature: 66292

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPTPPSKLGNLLPPDEYTAKPAKPGRKQAQEGEQAASAEYGRANVAAPMTHAANAATT
CCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCE
LRPVPNAAPAVAEATPSRSRKTKQTAALLQPVPAAPAADAQAAAPIVARRGKGSAEAEAP
ECCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCC
AAAAAKTVRPATKKDSAKGAQVEIRKLFVLDTNVLMHDPTCLFRFEEHDVYLPMMTLEEL
HHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCEEEECCEEEEEEECCCEEEHHHHHHHH
DNHKKGMSEVARNARQVSRTLDTLVANAGEMSEGIPLARLGSREALGRLYFQTKLTHIEP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHCCCHHHHHHHHHHHHCCCCCC
VEGLPQGKADNQILGVVRALQRDRQDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLED
CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCHHHHCCCCCCCH
KDLLYSGIRQLPPDFWTKHAKDMESWQDTKTGTTYYRVTGPLCASMLVNEFVYLEPQNGE
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHEEEEECCCCC
PAFHAIVRELNGKTALLQTLRDYGHHKNNVWGITARNREQNFALNLLMNPEIDFVTLLGQ
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECC
AGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDN
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCHHCCCCCC
LEVLQKTDDAAGEWGRAATQELIRSRLKIKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCHHHHHH
LVTRAGPGTKIICLGNIAQIDTPYLTEGSSGLTYVVDRFKGWAHSGHVTLARGERSRLAD
HHHCCCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHH
YASDIL
HHHHCC
>Mature Secondary Structure 
PLPTPPSKLGNLLPPDEYTAKPAKPGRKQAQEGEQAASAEYGRANVAAPMTHAANAATT
CCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCE
LRPVPNAAPAVAEATPSRSRKTKQTAALLQPVPAAPAADAQAAAPIVARRGKGSAEAEAP
ECCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCC
AAAAAKTVRPATKKDSAKGAQVEIRKLFVLDTNVLMHDPTCLFRFEEHDVYLPMMTLEEL
HHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCEEEECCEEEEEEECCCEEEHHHHHHHH
DNHKKGMSEVARNARQVSRTLDTLVANAGEMSEGIPLARLGSREALGRLYFQTKLTHIEP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHCCCHHHHHHHHHHHHCCCCCC
VEGLPQGKADNQILGVVRALQRDRQDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLED
CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCHHHHCCCCCCCH
KDLLYSGIRQLPPDFWTKHAKDMESWQDTKTGTTYYRVTGPLCASMLVNEFVYLEPQNGE
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHEEEEECCCCC
PAFHAIVRELNGKTALLQTLRDYGHHKNNVWGITARNREQNFALNLLMNPEIDFVTLLGQ
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECC
AGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDN
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCHHCCCCCC
LEVLQKTDDAAGEWGRAATQELIRSRLKIKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCHHHHHH
LVTRAGPGTKIICLGNIAQIDTPYLTEGSSGLTYVVDRFKGWAHSGHVTLARGERSRLAD
HHHCCCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHH
YASDIL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]