| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475670
Identifier: 186475670
GI number: 186475670
Start: 1008287
End: 1008745
Strand: Direct
Name: 186475670
Synonym: Bphy_0905
Alternate gene names: NA
Gene position: 1008287-1008745 (Clockwise)
Preceding gene: 186475669
Following gene: 186475674
Centisome position: 28.98
GC content: 64.05
Gene sequence:
>459_bases TTGAGCTCGCGCACGATTTCTTGCGGCGTCGTCCTGCTCGATCCCGACGGCCGCGTGCTGCTCGCACACGCGACGGAAAC GACGCACTGGGACATTCCGAAAGGGCAGGGTGAGGAAGGCGAAGCGCCGCAGGCGACGGCGCTTCGCGAGATGGACGAGG AAACGGGCCTTGCGCTTGAGGCAGAGCGCCTGAAAGACCTCGGGCTTTTTGTATATCGACGGGATAAGGATCTGCATCTG TTCGCCGCGCGCGCTCGCGCCGACGAACTCGATCTCTCGCGCTGCGTTTGCACCTCGATGTTTCCGCGCCGCTCGGACGG CACGATGATTCCCGAGATGGACGCCTTCCGCTGGGCCGCGCCGGATGAAGTCGAGCATTACGCGAGCCGCAGTCTCGCGC GGCTCTTTCAGACGACACTATCGCTCGCTGAGTTGCACCGGCTGCTGGATCCAGCGTAG
Upstream 100 bases:
>100_bases GTCAAATGCATGTGGTGTTGAGCGCGAAAGGCCAATCGATGAATCTGAACCCGCAGTTCTGCCGTGAGGGTACGGGCCGC TGGGTGCTCCAGAAGAAGCA
Downstream 100 bases:
>100_bases TCACGCCCGGCGGCGGGCCGAGGCGTCAGTCGAGCGCCTTGTCGTTCGGATGCGCGAACAACGTGCGCATCTCCGACGAC AACGGGTAGTTCAGGTTGAT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Nudix Hydrolase; Phosphohydrolase; NUDIX Family Hydrolase; NUDIX Domain Protein; Hydrolase Nudix Family
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSSRTISCGVVLLDPDGRVLLAHATETTHWDIPKGQGEEGEAPQATALREMDEETGLALEAERLKDLGLFVYRRDKDLHL FAARARADELDLSRCVCTSMFPRRSDGTMIPEMDAFRWAAPDEVEHYASRSLARLFQTTLSLAELHRLLDPA
Sequences:
>Translated_152_residues MSSRTISCGVVLLDPDGRVLLAHATETTHWDIPKGQGEEGEAPQATALREMDEETGLALEAERLKDLGLFVYRRDKDLHL FAARARADELDLSRCVCTSMFPRRSDGTMIPEMDAFRWAAPDEVEHYASRSLARLFQTTLSLAELHRLLDPA >Mature_151_residues SSRTISCGVVLLDPDGRVLLAHATETTHWDIPKGQGEEGEAPQATALREMDEETGLALEAERLKDLGLFVYRRDKDLHLF AARARADELDLSRCVCTSMFPRRSDGTMIPEMDAFRWAAPDEVEHYASRSLARLFQTTLSLAELHRLLDPA
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17040; Mature: 16909
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRTISCGVVLLDPDGRVLLAHATETTHWDIPKGQGEEGEAPQATALREMDEETGLALE CCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEE AERLKDLGLFVYRRDKDLHLFAARARADELDLSRCVCTSMFPRRSDGTMIPEMDAFRWAA HHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PDEVEHYASRSLARLFQTTLSLAELHRLLDPA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSRTISCGVVLLDPDGRVLLAHATETTHWDIPKGQGEEGEAPQATALREMDEETGLALE CCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEE AERLKDLGLFVYRRDKDLHLFAARARADELDLSRCVCTSMFPRRSDGTMIPEMDAFRWAA HHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PDEVEHYASRSLARLFQTTLSLAELHRLLDPA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA