| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186475669
Identifier: 186475669
GI number: 186475669
Start: 1007901
End: 1008290
Strand: Direct
Name: 186475669
Synonym: Bphy_0904
Alternate gene names: NA
Gene position: 1007901-1008290 (Clockwise)
Preceding gene: 186475667
Following gene: 186475670
Centisome position: 28.97
GC content: 59.74
Gene sequence:
>390_bases ATGTCGATGCCAACCCGAGCCGCGTTTCAACTCACCGTGGGCGGGCTGCTGCTCGCTGGCGCAGTGGGCGCGCATGCCGC CAATCTCGCCTTTTTGAACGACACGCCGATTTCCTACATGAAGCAGGCCGACAACGATTCGTTGAAAGCAGCCGCATTCG AAGCGCTCGACAAGAAGCAGGACGGCGAATCGGTCGCCTGGAACAACGAGGGTCTGCGCAACAGCACGAAAATCGAAGCG CAACTGACGCCCGACGCCACGTCGAAGACGGGCGATCGGACTTGCCGTCAAATGCATGTGGTGTTGAGCGCGAAAGGCCA ATCGATGAATCTGAACCCGCAGTTCTGCCGTGAGGGTACGGGCCGCTGGGTGCTCCAGAAGAAGCATTGA
Upstream 100 bases:
>100_bases AACCTGTGTGCGAGACGGGCGTGCTATGCTTTTGGGGTCCAGATCGCGCGGCTCAAGGGCAGCGCCGATCGTGCTCGAAC CGATTTCAGCGGAGAACTAC
Downstream 100 bases:
>100_bases GCTCGCGCACGATTTCTTGCGGCGTCGTCCTGCTCGATCCCGACGGCCGCGTGCTGCTCGCACACGCGACGGAAACGACG CACTGGGACATTCCGAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSMPTRAAFQLTVGGLLLAGAVGAHAANLAFLNDTPISYMKQADNDSLKAAAFEALDKKQDGESVAWNNEGLRNSTKIEA QLTPDATSKTGDRTCRQMHVVLSAKGQSMNLNPQFCREGTGRWVLQKKH
Sequences:
>Translated_129_residues MSMPTRAAFQLTVGGLLLAGAVGAHAANLAFLNDTPISYMKQADNDSLKAAAFEALDKKQDGESVAWNNEGLRNSTKIEA QLTPDATSKTGDRTCRQMHVVLSAKGQSMNLNPQFCREGTGRWVLQKKH >Mature_128_residues SMPTRAAFQLTVGGLLLAGAVGAHAANLAFLNDTPISYMKQADNDSLKAAAFEALDKKQDGESVAWNNEGLRNSTKIEAQ LTPDATSKTGDRTCRQMHVVLSAKGQSMNLNPQFCREGTGRWVLQKKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13962; Mature: 13831
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPTRAAFQLTVGGLLLAGAVGAHAANLAFLNDTPISYMKQADNDSLKAAAFEALDKKQ CCCCCCCEEEHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCHHHHHHHHHHCCC DGESVAWNNEGLRNSTKIEAQLTPDATSKTGDRTCRQMHVVLSAKGQSMNLNPQFCREGT CCCEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHEEEEECCCCCCCCCHHHHHCCC GRWVLQKKH CCEEEEECC >Mature Secondary Structure SMPTRAAFQLTVGGLLLAGAVGAHAANLAFLNDTPISYMKQADNDSLKAAAFEALDKKQ CCCCCCEEEHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCHHHHHHHHHHCCC DGESVAWNNEGLRNSTKIEAQLTPDATSKTGDRTCRQMHVVLSAKGQSMNLNPQFCREGT CCCEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHEEEEECCCCCCCCCHHHHHCCC GRWVLQKKH CCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA