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The map label for this gene is ymdC [H]

Identifier: 186475561

GI number: 186475561

Start: 894026

End: 895714

Strand: Reverse

Name: ymdC [H]

Synonym: Bphy_0796

Alternate gene names: 186475561

Gene position: 895714-894026 (Counterclockwise)

Preceding gene: 186475562

Following gene: 186475560

Centisome position: 25.74

GC content: 65.19

Gene sequence:

>1689_bases
GTGTCGGCCCACAATTCGAACGACGCCGCCTCACGGCGTCACCGACAACAGCAACGCCGTCTTTCCCTCGCGCGCAACGC
GCCCGGCCCGCTGCCCGTGCACGCGTTCGCGTGGTTCATGTCGGCACTCCTGCTAGCGGCCTGCGCGGCGCGCCCGCCCG
CCAACACGTTCGATCGCCCCGTCACGCACGCGCTGCCCGCGAGCGAGCCCACACCTCTCGCTACAGCACTCGCACCGCCC
GAGGCCGCGCATCCGGGCCAATCCGGTTTCCGCGTGCTGTCCGACGGCGCCGAGGCCCTGCAGACGCGCATCGCGCTCGC
ACGCTCGGCGACCAGGACGCTCGACATGCAGTACTACATCGCCGAAGAAGACACGACGGGCAAGCTGCTGCTCGGCGCCG
CGCTCTACGCAGCCGATCACGGCGTACGCGTGCGCATGCTGGTGGACGACCTGAACTTCAAGGACATCGACCGGGTGATG
GCCGCGCTGAACTCGCACGACAAGATCGAGATTCGCGTGTTCAACCCGTTCGGTAGCGCGCAGACGAGCTTCTATCAGCG
CAGCCGCAACTTCTTCACCCAGGTCGGCGCATTCACGCGGCGCATGCACAACAAGGCGATGATCGCCGACAACCAGATCG
CGATCGTCGGCGGCCGCAATCTCGGCGACGAATACTTCAGCGCAAGTCCGACACTGCAGTTCCGCGATATCGACGTGCTC
GCGGCGGGCCCGATCACGGCCGACATCTCCGCGAGCTTCGACGCGTACTGGAACGACAGCAACGCGTACCCGCTGCGCGC
GCTGAACAAGCAAAAATTCGATCCACACGATCTCGACGAGATGCGCGACGAGTTGCGCGCGCACTGGCGCAAGAACGCAG
ACCCGTACAACGCGAAGCCGCTGAACGCGACGCCGCTCGCCGCTCAGATCGCGAGCAACGAATTACAGCTCGTGTGGGCC
CCCGCCGAGTTCAAGGTCGATTCGCCCGACAAAATGAAACTGCCCGCCGACCAGTACAAGAGCCCGCCGATGCAGCGGCT
CGTCGAACTGATGCACGACTCGCAGCGCGAATTCCTCATTACGTCGCCGTACTTCGTGCCGCACCAGGCCGGCATCGATG
CGCTGGGCGCGCTCGTGCAGCGCGGCGTGAGCGTCAAGGTGCTGACCAATTCGCTCGCCGCGACGGACGCCGTCGCCGTG
CAGGCGGGCTACAGTCCGTACCGCGTGCCGCTGCTCGAGCGCGGCGTGCAGTTGTATGAGTTCAGGCCGACCCAGGGCAT
CGAAGCGCCCGAGGCGGGCCTGTTCGGCTCGCAATCCAAGGCGAGCCTGCATGCGAAAACGTACGTGATCGATCGCCAGA
TTCTCGTGATAGGCTCGATGAATCTCGATCCACGCTCCGCGCATCTGAACACCGAGCTTGCGCTCGTGATCCACAGCGCG
CCGCTCGCGGATCAGGTCGCCCATCTCTTCGACCAGGCAACGTCGCCTGGCGTCAGCTATCACGTGACGCTCGCGACACC
GGCCGAGCTCGCCGTGCTGCGCTATTCGGCCACGCCGCAAACGAAGCTCGTCTGGACCGACGAAGAAAACGGCCGGATTC
ACCGCTACAACCTCGATCCTGGCGCGGGCTTTTACCGCAATGCGCTGACGGGTCTATTCTTGTTGCTGCCAGTCGACGAG
CAGTTATAG

Upstream 100 bases:

>100_bases
CGGTATCCGACCCGCTTTAACGTTTCCTCGTAGAATCGTTCGGTCGCCGAACGGGCGATACCACGCCATTCATCGACGCC
GCTCAAGTGGAGGAACCAGC

Downstream 100 bases:

>100_bases
CCGCACAGTCATACGGCGCAGTCGAGGAGCGCGTGCTGCGCCGCTTTCCCGGAAGCCTTCCGATCACCCAGTCAAGCGGA
GTAGAACATGACCGAAGATG

Product: phospholipase D/transphosphatidylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MSAHNSNDAASRRHRQQQRRLSLARNAPGPLPVHAFAWFMSALLLAACAARPPANTFDRPVTHALPASEPTPLATALAPP
EAAHPGQSGFRVLSDGAEALQTRIALARSATRTLDMQYYIAEEDTTGKLLLGAALYAADHGVRVRMLVDDLNFKDIDRVM
AALNSHDKIEIRVFNPFGSAQTSFYQRSRNFFTQVGAFTRRMHNKAMIADNQIAIVGGRNLGDEYFSASPTLQFRDIDVL
AAGPITADISASFDAYWNDSNAYPLRALNKQKFDPHDLDEMRDELRAHWRKNADPYNAKPLNATPLAAQIASNELQLVWA
PAEFKVDSPDKMKLPADQYKSPPMQRLVELMHDSQREFLITSPYFVPHQAGIDALGALVQRGVSVKVLTNSLAATDAVAV
QAGYSPYRVPLLERGVQLYEFRPTQGIEAPEAGLFGSQSKASLHAKTYVIDRQILVIGSMNLDPRSAHLNTELALVIHSA
PLADQVAHLFDQATSPGVSYHVTLATPAELAVLRYSATPQTKLVWTDEENGRIHRYNLDPGAGFYRNALTGLFLLLPVDE
QL

Sequences:

>Translated_562_residues
MSAHNSNDAASRRHRQQQRRLSLARNAPGPLPVHAFAWFMSALLLAACAARPPANTFDRPVTHALPASEPTPLATALAPP
EAAHPGQSGFRVLSDGAEALQTRIALARSATRTLDMQYYIAEEDTTGKLLLGAALYAADHGVRVRMLVDDLNFKDIDRVM
AALNSHDKIEIRVFNPFGSAQTSFYQRSRNFFTQVGAFTRRMHNKAMIADNQIAIVGGRNLGDEYFSASPTLQFRDIDVL
AAGPITADISASFDAYWNDSNAYPLRALNKQKFDPHDLDEMRDELRAHWRKNADPYNAKPLNATPLAAQIASNELQLVWA
PAEFKVDSPDKMKLPADQYKSPPMQRLVELMHDSQREFLITSPYFVPHQAGIDALGALVQRGVSVKVLTNSLAATDAVAV
QAGYSPYRVPLLERGVQLYEFRPTQGIEAPEAGLFGSQSKASLHAKTYVIDRQILVIGSMNLDPRSAHLNTELALVIHSA
PLADQVAHLFDQATSPGVSYHVTLATPAELAVLRYSATPQTKLVWTDEENGRIHRYNLDPGAGFYRNALTGLFLLLPVDE
QL
>Mature_561_residues
SAHNSNDAASRRHRQQQRRLSLARNAPGPLPVHAFAWFMSALLLAACAARPPANTFDRPVTHALPASEPTPLATALAPPE
AAHPGQSGFRVLSDGAEALQTRIALARSATRTLDMQYYIAEEDTTGKLLLGAALYAADHGVRVRMLVDDLNFKDIDRVMA
ALNSHDKIEIRVFNPFGSAQTSFYQRSRNFFTQVGAFTRRMHNKAMIADNQIAIVGGRNLGDEYFSASPTLQFRDIDVLA
AGPITADISASFDAYWNDSNAYPLRALNKQKFDPHDLDEMRDELRAHWRKNADPYNAKPLNATPLAAQIASNELQLVWAP
AEFKVDSPDKMKLPADQYKSPPMQRLVELMHDSQREFLITSPYFVPHQAGIDALGALVQRGVSVKVLTNSLAATDAVAVQ
AGYSPYRVPLLERGVQLYEFRPTQGIEAPEAGLFGSQSKASLHAKTYVIDRQILVIGSMNLDPRSAHLNTELALVIHSAP
LADQVAHLFDQATSPGVSYHVTLATPAELAVLRYSATPQTKLVWTDEENGRIHRYNLDPGAGFYRNALTGLFLLLPVDEQ
L

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=495, Percent_Identity=37.1717171717172, Blast_Score=285, Evalue=7e-78,
Organism=Escherichia coli, GI1787502, Length=143, Percent_Identity=32.1678321678322, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61890; Mature: 61759

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHNSNDAASRRHRQQQRRLSLARNAPGPLPVHAFAWFMSALLLAACAARPPANTFDRP
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VTHALPASEPTPLATALAPPEAAHPGQSGFRVLSDGAEALQTRIALARSATRTLDMQYYI
CHHCCCCCCCCCCEEECCCCCCCCCCCCCCEEHHCCHHHHHHHHHHHHHHHHEEEEEEEE
AEEDTTGKLLLGAALYAADHGVRVRMLVDDLNFKDIDRVMAALNSHDKIEIRVFNPFGSA
ECCCCCCCEEEHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCH
QTSFYQRSRNFFTQVGAFTRRMHNKAMIADNQIAIVGGRNLGDEYFSASPTLQFRDIDVL
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCCHHHHCCCCCEEEECEEEE
AAGPITADISASFDAYWNDSNAYPLRALNKQKFDPHDLDEMRDELRAHWRKNADPYNAKP
ECCCEEEECCCCCCEEECCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
LNATPLAAQIASNELQLVWAPAEFKVDSPDKMKLPADQYKSPPMQRLVELMHDSQREFLI
CCCCCHHHHHCCCCEEEEEECCEEECCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCEEE
TSPYFVPHQAGIDALGALVQRGVSVKVLTNSLAATDAVAVQAGYSPYRVPLLERGVQLYE
ECCEECCCCCCHHHHHHHHHCCCEEEEECCCHHHCCCEEEECCCCCEECHHHHCCCEEEE
FRPTQGIEAPEAGLFGSQSKASLHAKTYVIDRQILVIGSMNLDPRSAHLNTELALVIHSA
ECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECC
PLADQVAHLFDQATSPGVSYHVTLATPAELAVLRYSATPQTKLVWTDEENGRIHRYNLDP
CHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCC
GAGFYRNALTGLFLLLPVDEQL
CCCHHHHHHHHEEEEEECCCCC
>Mature Secondary Structure 
SAHNSNDAASRRHRQQQRRLSLARNAPGPLPVHAFAWFMSALLLAACAARPPANTFDRP
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VTHALPASEPTPLATALAPPEAAHPGQSGFRVLSDGAEALQTRIALARSATRTLDMQYYI
CHHCCCCCCCCCCEEECCCCCCCCCCCCCCEEHHCCHHHHHHHHHHHHHHHHEEEEEEEE
AEEDTTGKLLLGAALYAADHGVRVRMLVDDLNFKDIDRVMAALNSHDKIEIRVFNPFGSA
ECCCCCCCEEEHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCH
QTSFYQRSRNFFTQVGAFTRRMHNKAMIADNQIAIVGGRNLGDEYFSASPTLQFRDIDVL
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCCHHHHCCCCCEEEECEEEE
AAGPITADISASFDAYWNDSNAYPLRALNKQKFDPHDLDEMRDELRAHWRKNADPYNAKP
ECCCEEEECCCCCCEEECCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
LNATPLAAQIASNELQLVWAPAEFKVDSPDKMKLPADQYKSPPMQRLVELMHDSQREFLI
CCCCCHHHHHCCCCEEEEEECCEEECCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCEEE
TSPYFVPHQAGIDALGALVQRGVSVKVLTNSLAATDAVAVQAGYSPYRVPLLERGVQLYE
ECCEECCCCCCHHHHHHHHHCCCEEEEECCCHHHCCCEEEECCCCCEECHHHHCCCEEEE
FRPTQGIEAPEAGLFGSQSKASLHAKTYVIDRQILVIGSMNLDPRSAHLNTELALVIHSA
ECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECC
PLADQVAHLFDQATSPGVSYHVTLATPAELAVLRYSATPQTKLVWTDEENGRIHRYNLDP
CHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCC
GAGFYRNALTGLFLLLPVDEQL
CCCHHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]