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The map label for this gene is tse [H]

Identifier: 186475114

GI number: 186475114

Start: 389091

End: 390734

Strand: Direct

Name: tse [H]

Synonym: Bphy_0345

Alternate gene names: 186475114

Gene position: 389091-390734 (Clockwise)

Preceding gene: 186475112

Following gene: 186475122

Centisome position: 11.18

GC content: 64.11

Gene sequence:

>1644_bases
ATGTTGAAAGGTCTTTCGATTCGCGCATACCTCACGTTAATGATCGTGCTGTTCGGCATTGTGCTGCTGATCGGCGCGGC
TGCGGGGCTGTTATCGCTGCGTGCGAGCAATGCGTCACTGCAGCAGATGTACACCGTCGACACGCCCGCCGTGGCCGACC
TCGAAGGCAGCGCCGGGCAACTGTTGCGCCTGCGTCTCGCACTGGCGACCTACGCTTCGCTAGACGAACTGAACGATCGG
GAAGGCGCCGACGCAGTGCTCAAGCGTTTCGATACGTATCTGAAGGTGTCGAACGAACGGCTCGCGCATTTCATCAGCAA
AGCCAGCAACGACCCCGACGAGCAACGGCTCATCAAGGACATGCAGGACAAGCGTGATAGCTTCCTGCGCGAGGGCGTCG
AACCCGCACTCGCGGCGCTCAAGTCCGGCGACAAGACGGCCTTCCAGCAGTTGCAGGGGCACAAGCTGTCGCCGCTCTAC
AGCGCCTATGAAAAAGCAATGCTGACGCTCGAAAAGCTCCAGCTCGACCACGCCGAGCAGCGCTATCAGGACGCGCAGCA
GCTGTTCTACACGATCAGCGTCGGCGTGGCGATCGGCATGGCAGCCACGCTGATGTTCGCGTGGATTGGACGCTTGATCA
TGGTTCGCGCGATCGTGCATCCCGTCGACGCGACCATCGAGCAGTTCCAGCGCATTGCGAACGGCGACCTCACGGGCCGC
ATCGACATTCACGGCGACAACGAAATGGGACGTCTCGCGGCGGCGCTGCGCAAGATGCAGGAGTCGCTGATCGCGACGGT
CAGCACGGTGCGTCACGGCACGGATTCGATCGATACGGGCGTGAGCGAGATCGCCGCGGGCAACACGAATCTCTCGCAGC
GCACGGAAGAGCAGGCCGCGTCGCTCGAAGAGACGGCGGCGAGCATCGAGGAACTCACGTCGACCGTCAAGCAGACGGCC
GACAACGCAAAACAGGCGAGCACGCTCGCACACGGTGCGTCGACTCTCGCGGCGCAGGGCGGCGACCTCACGCAACAGGT
GGTCGGCACGATGCAGGCGATCGTCGACGACTCGCGCCGCATCGCGGACATCGTCGGCGTGATCGAAGGCATCGCGTTCC
AGACCAACATTCTCGCGCTGAACGCAGCCGTCGAAGCCGCGCGCGCAGGCGAACAGGGGCGCGGTTTCGCGGTGGTGGCG
AGCGAAGTGCGTTCGCTCGCGCAGCGCAGCGCGGCAGCCGCGAAGGAGATCAAAGGCTTGATCGGCGAATCGAACGAACG
CGTGACGGCGGGCGCGGATCTCGTGCAGCGCTCCGGCTCGACGATGACGGAGATCGTCGATGCAATCGCACGCGTCAGCG
CGATCATGGGCGAGATCGCCGAAGCGGCGACCGAGCAGAGCACGGGCATCGATCAGGTCAATCTCGCTGTCGCGCAGATG
GACGAGGTAACGCAGCAGAACGCGGCACTCGTCGAGCAGGCGGCGGCAGCGGCGAGCTCGCTGGAAGAGCAGGCGCGTCG
ACTGACGGAAGCCGTCTCCGTGTTCAAGACGGATAGCGGACAGGGAGCTTCGTCGCGGATGATGGCGCTTCGCGCCCGCA
GACAGCAATCAGCGATGCCGCTTGAGGCGGCAGAAGCCGTCTGA

Upstream 100 bases:

>100_bases
ATATTTGATCGAGTTGCGGACCTTGCCCCGCGGGCGTGGGCGCAGCAAGCCTGCCGTGGAACGGGAGATTTCAGGTACGC
GGCCATAGGAGACATGCTTC

Downstream 100 bases:

>100_bases
CCCGTATCGACAGCGCCGCCAGCGACAGCCGCAGCGCGATTCGCTGACGGCACGAAGCAAACCGGCGGTGCAGGCATCGT
TGCCTTGCACCGCCGTTCGT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MLKGLSIRAYLTLMIVLFGIVLLIGAAAGLLSLRASNASLQQMYTVDTPAVADLEGSAGQLLRLRLALATYASLDELNDR
EGADAVLKRFDTYLKVSNERLAHFISKASNDPDEQRLIKDMQDKRDSFLREGVEPALAALKSGDKTAFQQLQGHKLSPLY
SAYEKAMLTLEKLQLDHAEQRYQDAQQLFYTISVGVAIGMAATLMFAWIGRLIMVRAIVHPVDATIEQFQRIANGDLTGR
IDIHGDNEMGRLAAALRKMQESLIATVSTVRHGTDSIDTGVSEIAAGNTNLSQRTEEQAASLEETAASIEELTSTVKQTA
DNAKQASTLAHGASTLAAQGGDLTQQVVGTMQAIVDDSRRIADIVGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVA
SEVRSLAQRSAAAAKEIKGLIGESNERVTAGADLVQRSGSTMTEIVDAIARVSAIMGEIAEAATEQSTGIDQVNLAVAQM
DEVTQQNAALVEQAAAAASSLEEQARRLTEAVSVFKTDSGQGASSRMMALRARRQQSAMPLEAAEAV

Sequences:

>Translated_547_residues
MLKGLSIRAYLTLMIVLFGIVLLIGAAAGLLSLRASNASLQQMYTVDTPAVADLEGSAGQLLRLRLALATYASLDELNDR
EGADAVLKRFDTYLKVSNERLAHFISKASNDPDEQRLIKDMQDKRDSFLREGVEPALAALKSGDKTAFQQLQGHKLSPLY
SAYEKAMLTLEKLQLDHAEQRYQDAQQLFYTISVGVAIGMAATLMFAWIGRLIMVRAIVHPVDATIEQFQRIANGDLTGR
IDIHGDNEMGRLAAALRKMQESLIATVSTVRHGTDSIDTGVSEIAAGNTNLSQRTEEQAASLEETAASIEELTSTVKQTA
DNAKQASTLAHGASTLAAQGGDLTQQVVGTMQAIVDDSRRIADIVGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVA
SEVRSLAQRSAAAAKEIKGLIGESNERVTAGADLVQRSGSTMTEIVDAIARVSAIMGEIAEAATEQSTGIDQVNLAVAQM
DEVTQQNAALVEQAAAAASSLEEQARRLTEAVSVFKTDSGQGASSRMMALRARRQQSAMPLEAAEAV
>Mature_547_residues
MLKGLSIRAYLTLMIVLFGIVLLIGAAAGLLSLRASNASLQQMYTVDTPAVADLEGSAGQLLRLRLALATYASLDELNDR
EGADAVLKRFDTYLKVSNERLAHFISKASNDPDEQRLIKDMQDKRDSFLREGVEPALAALKSGDKTAFQQLQGHKLSPLY
SAYEKAMLTLEKLQLDHAEQRYQDAQQLFYTISVGVAIGMAATLMFAWIGRLIMVRAIVHPVDATIEQFQRIANGDLTGR
IDIHGDNEMGRLAAALRKMQESLIATVSTVRHGTDSIDTGVSEIAAGNTNLSQRTEEQAASLEETAASIEELTSTVKQTA
DNAKQASTLAHGASTLAAQGGDLTQQVVGTMQAIVDDSRRIADIVGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVA
SEVRSLAQRSAAAAKEIKGLIGESNERVTAGADLVQRSGSTMTEIVDAIARVSAIMGEIAEAATEQSTGIDQVNLAVAQM
DEVTQQNAALVEQAAAAASSLEEQARRLTEAVSVFKTDSGQGASSRMMALRARRQQSAMPLEAAEAV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=426, Percent_Identity=47.6525821596244, Blast_Score=340, Evalue=1e-94,
Organism=Escherichia coli, GI2367378, Length=538, Percent_Identity=45.1672862453532, Blast_Score=334, Evalue=8e-93,
Organism=Escherichia coli, GI1788195, Length=309, Percent_Identity=60.8414239482201, Blast_Score=326, Evalue=3e-90,
Organism=Escherichia coli, GI1788194, Length=352, Percent_Identity=51.4204545454545, Blast_Score=312, Evalue=4e-86,
Organism=Escherichia coli, GI1789453, Length=321, Percent_Identity=36.4485981308411, Blast_Score=192, Evalue=5e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58286; Mature: 58286

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGLSIRAYLTLMIVLFGIVLLIGAAAGLLSLRASNASLQQMYTVDTPAVADLEGSAGQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCCHHH
LLRLRLALATYASLDELNDREGADAVLKRFDTYLKVSNERLAHFISKASNDPDEQRLIKD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
MQDKRDSFLREGVEPALAALKSGDKTAFQQLQGHKLSPLYSAYEKAMLTLEKLQLDHAEQ
HHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RYQDAQQLFYTISVGVAIGMAATLMFAWIGRLIMVRAIVHPVDATIEQFQRIANGDLTGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IDIHGDNEMGRLAAALRKMQESLIATVSTVRHGTDSIDTGVSEIAAGNTNLSQRTEEQAA
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
SLEETAASIEELTSTVKQTADNAKQASTLAHGASTLAAQGGDLTQQVVGTMQAIVDDSRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IADIVGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IGESNERVTAGADLVQRSGSTMTEIVDAIARVSAIMGEIAEAATEQSTGIDQVNLAVAQM
HCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
DEVTQQNAALVEQAAAAASSLEEQARRLTEAVSVFKTDSGQGASSRMMALRARRQQSAMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
LEAAEAV
CHHHCCC
>Mature Secondary Structure
MLKGLSIRAYLTLMIVLFGIVLLIGAAAGLLSLRASNASLQQMYTVDTPAVADLEGSAGQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCCHHH
LLRLRLALATYASLDELNDREGADAVLKRFDTYLKVSNERLAHFISKASNDPDEQRLIKD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
MQDKRDSFLREGVEPALAALKSGDKTAFQQLQGHKLSPLYSAYEKAMLTLEKLQLDHAEQ
HHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RYQDAQQLFYTISVGVAIGMAATLMFAWIGRLIMVRAIVHPVDATIEQFQRIANGDLTGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IDIHGDNEMGRLAAALRKMQESLIATVSTVRHGTDSIDTGVSEIAAGNTNLSQRTEEQAA
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
SLEETAASIEELTSTVKQTADNAKQASTLAHGASTLAAQGGDLTQQVVGTMQAIVDDSRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IADIVGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IGESNERVTAGADLVQRSGSTMTEIVDAIARVSAIMGEIAEAATEQSTGIDQVNLAVAQM
HCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
DEVTQQNAALVEQAAAAASSLEEQARRLTEAVSVFKTDSGQGASSRMMALRARRQQSAMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
LEAAEAV
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]