| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186474797
Identifier: 186474797
GI number: 186474797
Start: 29667
End: 30656
Strand: Direct
Name: 186474797
Synonym: Bphy_0026
Alternate gene names: NA
Gene position: 29667-30656 (Clockwise)
Preceding gene: 186474796
Following gene: 186474798
Centisome position: 0.85
GC content: 63.43
Gene sequence:
>990_bases ATGTCTGCCCCATTGACGCTGGACGATATGCAACGGCTGGCCGCTCGCCACGGTGGCCGGTGCATATCGACCGACTACCG GAATATCCATACGGAACTACGCTGGCGATGCGTGCGGGGCCACGAGTGGGAGGCGACACCATTTAGTGTGCGTCAGGGCA AGTGGTGTGCGACTTGCGCTCACGACGAACATAGCGCGGTCTGGCTCCCTGCAATGCACACACTCGCTCGTGAACGCGGC GGCAAATGCCTTTCCGAAACTTACGTGAACAGCCGCACAAAACTGTGGTGGGAATGTCATCAAGGCCACACGTGGGAGGC CACGCCCGCCAGCATACGTGTGGCCGGGGCGTGGTGCCCGGCGTGTGCCGCTGATAGCCGGAAGGGGACCATGAATGACA TGCACGCGCTCGCGGCGAGGCATCGCGGCCACTGCCTGTCTACGGACTACGCCGGTCCGACAGGCAAGTTACGCTGGCGC TGTGCCGAAGGTCACGAATGGGTCACGTCCCCCGCCAGGGTACGCAACGGCTTCTGGTGCGCAATCTGTGCGAAGCAGGG ACGCCGCTCATCGAGGCTTGAGGACATGCACCTGTTGGCCGCGAGTCGCGGTGGCAAATGCCTGTCGGACACCTATGAAA CGAGCGCGCGTCTGCTGCGCTGGGAATGCTGCCGTGGACACCGCTGGCTGGCCGCGCCCGCAAATATCAAGGGTGGAACA TGGTGCCCGAAGTGCGCCCGTGCGGAACGCTCGAACCATACCATTGGGGAAATGAACGAGATCGCTCGCGAGCGTGGCGG GCGCTGCCTCTCGGACGCCTACGTGAACGTCACGACGAAGCTCGAATGGGAGTGCGCACGGGGCTATGCCTGGTCAACGT CCCCGATGGCAGTGCTGGCGGGCTGCTGGTGCCCGGCGTGCAAGTATTTAGACCAATGCGTATCGGATGAGGCCAGGCGC AAGTATCTGGCCGTTGCCGGGTGCCCTTGA
Upstream 100 bases:
>100_bases CGAGGACGGGCGTGCGAGCGTACTCGACGGCGACCAGGTGCTGTGTCCATGCGGGGCCAATCACGTCAAGGCGAGTCCTG ACGCGGGATGTTCGACCTGA
Downstream 100 bases:
>100_bases CCCTGCGCAGCAAAGGCTGCCGCGCATCCTAACGTCAGCCGCTCTCATCTCTGATTTGGGTTGTTGGTTCGGGGGATAGC AACGCCCCCTGACCCGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSAPLTLDDMQRLAARHGGRCISTDYRNIHTELRWRCVRGHEWEATPFSVRQGKWCATCAHDEHSAVWLPAMHTLARERG GKCLSETYVNSRTKLWWECHQGHTWEATPASIRVAGAWCPACAADSRKGTMNDMHALAARHRGHCLSTDYAGPTGKLRWR CAEGHEWVTSPARVRNGFWCAICAKQGRRSSRLEDMHLLAASRGGKCLSDTYETSARLLRWECCRGHRWLAAPANIKGGT WCPKCARAERSNHTIGEMNEIARERGGRCLSDAYVNVTTKLEWECARGYAWSTSPMAVLAGCWCPACKYLDQCVSDEARR KYLAVAGCP
Sequences:
>Translated_329_residues MSAPLTLDDMQRLAARHGGRCISTDYRNIHTELRWRCVRGHEWEATPFSVRQGKWCATCAHDEHSAVWLPAMHTLARERG GKCLSETYVNSRTKLWWECHQGHTWEATPASIRVAGAWCPACAADSRKGTMNDMHALAARHRGHCLSTDYAGPTGKLRWR CAEGHEWVTSPARVRNGFWCAICAKQGRRSSRLEDMHLLAASRGGKCLSDTYETSARLLRWECCRGHRWLAAPANIKGGT WCPKCARAERSNHTIGEMNEIARERGGRCLSDAYVNVTTKLEWECARGYAWSTSPMAVLAGCWCPACKYLDQCVSDEARR KYLAVAGCP >Mature_328_residues SAPLTLDDMQRLAARHGGRCISTDYRNIHTELRWRCVRGHEWEATPFSVRQGKWCATCAHDEHSAVWLPAMHTLARERGG KCLSETYVNSRTKLWWECHQGHTWEATPASIRVAGAWCPACAADSRKGTMNDMHALAARHRGHCLSTDYAGPTGKLRWRC AEGHEWVTSPARVRNGFWCAICAKQGRRSSRLEDMHLLAASRGGKCLSDTYETSARLLRWECCRGHRWLAAPANIKGGTW CPKCARAERSNHTIGEMNEIARERGGRCLSDAYVNVTTKLEWECARGYAWSTSPMAVLAGCWCPACKYLDQCVSDEARRK YLAVAGCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36970; Mature: 36839
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 7.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPLTLDDMQRLAARHGGRCISTDYRNIHTELRWRCVRGHEWEATPFSVRQGKWCATCA CCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHEEEEECCCCCCCCCCCCCCCCEEEEEC HDEHSAVWLPAMHTLARERGGKCLSETYVNSRTKLWWECHQGHTWEATPASIRVAGAWCP CCCCCEEEHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCC ACAADSRKGTMNDMHALAARHRGHCLSTDYAGPTGKLRWRCAEGHEWVTSPARVRNGFWC CCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCEEEEECCCCCCCCCHHHHCCCEEE AICAKQGRRSSRLEDMHLLAASRGGKCLSDTYETSARLLRWECCRGHRWLAAPANIKGGT EEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC WCPKCARAERSNHTIGEMNEIARERGGRCLSDAYVNVTTKLEWECARGYAWSTSPMAVLA CCCHHHHHCCCCCCHHHHHHHHHHHCCCEEECCEEEEEEEEEEEECCCCCCCCCHHHHHH GCWCPACKYLDQCVSDEARRKYLAVAGCP HHHHHHHHHHHHHHCHHHHHCEEEEECCC >Mature Secondary Structure SAPLTLDDMQRLAARHGGRCISTDYRNIHTELRWRCVRGHEWEATPFSVRQGKWCATCA CCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHEEEEECCCCCCCCCCCCCCCCEEEEEC HDEHSAVWLPAMHTLARERGGKCLSETYVNSRTKLWWECHQGHTWEATPASIRVAGAWCP CCCCCEEEHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCC ACAADSRKGTMNDMHALAARHRGHCLSTDYAGPTGKLRWRCAEGHEWVTSPARVRNGFWC CCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCEEEEECCCCCCCCCHHHHCCCEEE AICAKQGRRSSRLEDMHLLAASRGGKCLSDTYETSARLLRWECCRGHRWLAAPANIKGGT EEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC WCPKCARAERSNHTIGEMNEIARERGGRCLSDAYVNVTTKLEWECARGYAWSTSPMAVLA CCCHHHHHCCCCCCHHHHHHHHHHHCCCEEECCEEEEEEEEEEEECCCCCCCCCHHHHHH GCWCPACKYLDQCVSDEARRKYLAVAGCP HHHHHHHHHHHHHHCHHHHHCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA