Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186474798

Identifier: 186474798

GI number: 186474798

Start: 31178

End: 31582

Strand: Direct

Name: 186474798

Synonym: Bphy_0027

Alternate gene names: NA

Gene position: 31178-31582 (Clockwise)

Preceding gene: 186474797

Following gene: 186474799

Centisome position: 0.9

GC content: 62.72

Gene sequence:

>405_bases
ATGGACGACAACGAAGTCCGGGAATTGCTCGACCGTGTGCTTGCGCCGTGGGTGCGGGCGCTTTCGCTTACGCCCGTCAA
GGTCGACGATGAAAGCGCCACGCTCCGCTTGCCGTTTTCAGGCGAACTGCGTCACAGCGGCGGCGTCATCTGTGGCCAGG
TCTTCATGGCCGCCGCGGACACGGCGATGGTGGTCGCCATTTCAGCGGCGCTCGGCGGGTTCAAGCCGATGACAACCGTC
TCGCTCAACATCAGCTTCATGCGCGCCGTCCGCAAAGGCGACGTGCTGATCATGGCGCGTGTGCTGCGCATGGGCCGCAA
TCTCGTATTTGGCGAAGTCGAACTCATCGACGAAGACGGCAAGATGGCCGTCCACGCCACCACCACTTACGCGCTGCTCA
ACTGA

Upstream 100 bases:

>100_bases
GGGCCGAAAGCACCATTGAAGCGCACGCGCGTTCGTACCGGTATGATGTCGCGACATGACGCCGTGCGGCCTTCCGCGCG
GCCCCAACGGAAAAATCACA

Downstream 100 bases:

>100_bases
ACTCGCATCCGCCGTCGGCGCGCGCGCCGCGGCGATCGAAGGAAACAACGGATGTTCGATCAGGTCGTTTTCGCCGGCGG
CGGCAATCGTTGCTGGTGGC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Protein; Phenylacetic Acid Degradation-Like Protein

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MDDNEVRELLDRVLAPWVRALSLTPVKVDDESATLRLPFSGELRHSGGVICGQVFMAAADTAMVVAISAALGGFKPMTTV
SLNISFMRAVRKGDVLIMARVLRMGRNLVFGEVELIDEDGKMAVHATTTYALLN

Sequences:

>Translated_134_residues
MDDNEVRELLDRVLAPWVRALSLTPVKVDDESATLRLPFSGELRHSGGVICGQVFMAAADTAMVVAISAALGGFKPMTTV
SLNISFMRAVRKGDVLIMARVLRMGRNLVFGEVELIDEDGKMAVHATTTYALLN
>Mature_134_residues
MDDNEVRELLDRVLAPWVRALSLTPVKVDDESATLRLPFSGELRHSGGVICGQVFMAAADTAMVVAISAALGGFKPMTTV
SLNISFMRAVRKGDVLIMARVLRMGRNLVFGEVELIDEDGKMAVHATTTYALLN

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14535; Mature: 14535

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDNEVRELLDRVLAPWVRALSLTPVKVDDESATLRLPFSGELRHSGGVICGQVFMAAAD
CCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHCC
TAMVVAISAALGGFKPMTTVSLNISFMRAVRKGDVLIMARVLRMGRNLVFGEVELIDEDG
HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEEEECCC
KMAVHATTTYALLN
CEEEEEEEEEEEEC
>Mature Secondary Structure
MDDNEVRELLDRVLAPWVRALSLTPVKVDDESATLRLPFSGELRHSGGVICGQVFMAAAD
CCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHCC
TAMVVAISAALGGFKPMTTVSLNISFMRAVRKGDVLIMARVLRMGRNLVFGEVELIDEDG
HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEEEECCC
KMAVHATTTYALLN
CEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA