| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186474795
Identifier: 186474795
GI number: 186474795
Start: 28054
End: 28971
Strand: Direct
Name: 186474795
Synonym: Bphy_0024
Alternate gene names: NA
Gene position: 28054-28971 (Clockwise)
Preceding gene: 186474794
Following gene: 186474796
Centisome position: 0.81
GC content: 44.34
Gene sequence:
>918_bases ATGTGCGATTTTTCGAGTAGCGAGTTTGAGTCGGTAGTTATCACAAGCCCATCCGGCCGAAAATTGTGTCGCGTTTCTCA TCGAGATACAACCGTATCAAGCGACCAGGTTGCGAAAAAGGTGCTCATCTCCGATAAATCAGTGCGACTTCAAATAACGA CCGAAAAGACAGGATTCACACTCCAAAAGGTTTACGGTCATCCAAATACATCAGGTAATTTCCAAAAATTTTGGGATTGG CAGCCTGCAGTAGTTGTCCCGACATATCGGGCAAATTTAACAGTTTACGATCCCAAAAAAGAGGACCGTGTCGTTTCTCA ACTTGATTTGACGAGAGATGCAACATATTACTTGGGGCGGGACTCAAGCGGCCGTGACTGGTGTAGAAATATTGCTTTCG AGCCGCAGGACGCTAATAATAACGTGTATATAACGGACGAGGTGCATTTCCCCCCGCTTGCGGACCCAATCATTAAAGGT TACATTTTAATGGAACTTGAAAAAAATAATAAGCCATCGCGCAGCCTTCACGCGGAGCCAGTAAGCATGAAAAATCCCTA TGGGCCGGAATTAACTATTCGGCCACTTGGAAATATCGCTCACGATTGCTTGTTTCATATTGGCGGATTTTATGAGGCTA GAATTTCAGCTGGCCATGCAAAATGGCTTGGAGGATCCGAAGGATGCTTCGCCTTCATTCCAAAAGAAAGTGTTTCGAAA ACCGAAAATGACGCCGCAAAGGTTGCGGCAAATACAGAATTTTATTCGAATAAAAAATGGGTGAGTGTGACTGATTCAAT TGATGCCCACAGAAAATTGGATTCAAAAAATCGGTTCTTTGTCGAGCTTGCCAAGCGCTCGTCATTTTCGCGCGATTCCT GCGTGGAGATAATAAAAATCGCTCGCGCTTTTCCTTAA
Upstream 100 bases:
>100_bases TGAGCAAGGGCATACGCATTTACTGAGCCAGACTGCCACGTCGGAATCGGTGGCAATTTACGCGTAACTATTGAATAGTT GGATTTTCTAGGTAGAGAAA
Downstream 100 bases:
>100_bases TGTTTTAAACTCAGTAAAGCTGCGTAATTTGATATGATTTCAGTAATTAAATTTTTGCGCATTGTCTTGTTTGTGTTGTT GGTTTTCGGTCTGGCATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MCDFSSSEFESVVITSPSGRKLCRVSHRDTTVSSDQVAKKVLISDKSVRLQITTEKTGFTLQKVYGHPNTSGNFQKFWDW QPAVVVPTYRANLTVYDPKKEDRVVSQLDLTRDATYYLGRDSSGRDWCRNIAFEPQDANNNVYITDEVHFPPLADPIIKG YILMELEKNNKPSRSLHAEPVSMKNPYGPELTIRPLGNIAHDCLFHIGGFYEARISAGHAKWLGGSEGCFAFIPKESVSK TENDAAKVAANTEFYSNKKWVSVTDSIDAHRKLDSKNRFFVELAKRSSFSRDSCVEIIKIARAFP
Sequences:
>Translated_305_residues MCDFSSSEFESVVITSPSGRKLCRVSHRDTTVSSDQVAKKVLISDKSVRLQITTEKTGFTLQKVYGHPNTSGNFQKFWDW QPAVVVPTYRANLTVYDPKKEDRVVSQLDLTRDATYYLGRDSSGRDWCRNIAFEPQDANNNVYITDEVHFPPLADPIIKG YILMELEKNNKPSRSLHAEPVSMKNPYGPELTIRPLGNIAHDCLFHIGGFYEARISAGHAKWLGGSEGCFAFIPKESVSK TENDAAKVAANTEFYSNKKWVSVTDSIDAHRKLDSKNRFFVELAKRSSFSRDSCVEIIKIARAFP >Mature_305_residues MCDFSSSEFESVVITSPSGRKLCRVSHRDTTVSSDQVAKKVLISDKSVRLQITTEKTGFTLQKVYGHPNTSGNFQKFWDW QPAVVVPTYRANLTVYDPKKEDRVVSQLDLTRDATYYLGRDSSGRDWCRNIAFEPQDANNNVYITDEVHFPPLADPIIKG YILMELEKNNKPSRSLHAEPVSMKNPYGPELTIRPLGNIAHDCLFHIGGFYEARISAGHAKWLGGSEGCFAFIPKESVSK TENDAAKVAANTEFYSNKKWVSVTDSIDAHRKLDSKNRFFVELAKRSSFSRDSCVEIIKIARAFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34384; Mature: 34384
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDFSSSEFESVVITSPSGRKLCRVSHRDTTVSSDQVAKKVLISDKSVRLQITTEKTGFT CCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCE LQKVYGHPNTSGNFQKFWDWQPAVVVPTYRANLTVYDPKKEDRVVSQLDLTRDATYYLGR EEEEECCCCCCCCCCEECCCCCEEEEEEEECEEEEECCCCHHHHHHHHHCCCCCEEEECC DSSGRDWCRNIAFEPQDANNNVYITDEVHFPPLADPIIKGYILMELEKNNKPSRSLHAEP CCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEEEECCCCCCCCCCCCC VSMKNPYGPELTIRPLGNIAHDCLFHIGGFYEARISAGHAKWLGGSEGCFAFIPKESVSK CCCCCCCCCCEEEEECHHHHHHHHHHHCCEEEEEECCCCEEECCCCCCEEEECCCHHHCC TENDAAKVAANTEFYSNKKWVSVTDSIDAHRKLDSKNRFFVELAKRSSFSRDSCVEIIKI CCCCHHEEEECCCEECCCCEEEEECCCHHHHHCCCCCCEEEEEEHHCCCCHHHHHHHHHH ARAFP HHCCC >Mature Secondary Structure MCDFSSSEFESVVITSPSGRKLCRVSHRDTTVSSDQVAKKVLISDKSVRLQITTEKTGFT CCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCE LQKVYGHPNTSGNFQKFWDWQPAVVVPTYRANLTVYDPKKEDRVVSQLDLTRDATYYLGR EEEEECCCCCCCCCCEECCCCCEEEEEEEECEEEEECCCCHHHHHHHHHCCCCCEEEECC DSSGRDWCRNIAFEPQDANNNVYITDEVHFPPLADPIIKGYILMELEKNNKPSRSLHAEP CCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEEEECCCCCCCCCCCCC VSMKNPYGPELTIRPLGNIAHDCLFHIGGFYEARISAGHAKWLGGSEGCFAFIPKESVSK CCCCCCCCCCEEEEECHHHHHHHHHHHCCEEEEEECCCCEEECCCCCCEEEECCCHHHCC TENDAAKVAANTEFYSNKKWVSVTDSIDAHRKLDSKNRFFVELAKRSSFSRDSCVEIIKI CCCCHHEEEECCCEECCCCEEEEECCCHHHHHCCCCCCEEEEEEHHCCCCHHHHHHHHHH ARAFP HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA