| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is eutC [H]
Identifier: 186474780
GI number: 186474780
Start: 10207
End: 11001
Strand: Direct
Name: eutC [H]
Synonym: Bphy_0008
Alternate gene names: 186474780
Gene position: 10207-11001 (Clockwise)
Preceding gene: 186474779
Following gene: 186474783
Centisome position: 0.29
GC content: 62.52
Gene sequence:
>795_bases ATGAGCGACTCGATCGAAAAGAATGCGTGGCAGGCATTGCGTGCTTTCACGAATGCGCGCATCGCGTTGGGCCGCGCGGG CAACAGTCTGCCGACCGCGCCGCTGCTCGCGTTCAATCTGTCCCATGCGCAGGCGCGCGATGCCGTGCATCATCCGCTCG ATGTCGACGTCTTGCATGAACAGCTGCGCACGCTCGGCTTCTCGACGCTCGACGTGCATAGCGCGGCGCCGGATCGCGCG CATTATTTGCGGCGTCCGGACATGGGCCGCCGCTTGTCCGACGAGAGCCGTGAAGCGCTCACTCATGCCGCCGCAAGCGA AGCGCCCGATGTCGTGTTCGTCATCGCCGACGGACTCTCAGCATTCGCCGCGTCGAAACAGTCAGTTCCTTTTCTCCAGG CCGTCACGAAACGTCTCGCCGGGTGGAAGATCGGGCCCGTCGTGGTCGCGCGCCAATCGCGAGTCGCGTTGGGCGATGAG ATCGGCGAGTTGTTGAGGTCGAAGCTGGTCGTGATGCTGATTGGCGAAAGGCCAGGACTGAGTTCGCCGGATAGTCTCGG CGTCTATCTGACGTACGCGCCTAAAGTCGGATGCAGCGATGCGCAGCGCAACTGCATTTCGAACGTGCGGCCCGAAGGCC TTGATTACGAAGCCGCCGCGCACAAGCTGCACTATTTGCTGACGCATGCGCGTCGTCTGGGATTGACGGGCGTCGGCTTG AAGGATGACAGCGACGCGTTGCTGCAAGCGCCCGAAACCAAGCCGACAATCGCCGACGATTCAAAGACCCGCTGA
Upstream 100 bases:
>100_bases GGCTGGAATCGATGCAGATCACAGACACGCGCGGCGCGCTGCTCAATGCGCCGACGGGTCAGCCATTGCTCGAAGGCGCG AGCGAATGGATGGGCATCGC
Downstream 100 bases:
>100_bases ACGAATTGCCCCGGCTCATGCGTCGGGGCTCTGCGAACGCTTACGCATCCACCTTGCTGACAGGATGCTTTTCGAGCCAC GCATTCTCATCGTCTGCGAA
Product: ethanolamine ammonia-lyase small subunit
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase small subunit [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSDSIEKNAWQALRAFTNARIALGRAGNSLPTAPLLAFNLSHAQARDAVHHPLDVDVLHEQLRTLGFSTLDVHSAAPDRA HYLRRPDMGRRLSDESREALTHAAASEAPDVVFVIADGLSAFAASKQSVPFLQAVTKRLAGWKIGPVVVARQSRVALGDE IGELLRSKLVVMLIGERPGLSSPDSLGVYLTYAPKVGCSDAQRNCISNVRPEGLDYEAAAHKLHYLLTHARRLGLTGVGL KDDSDALLQAPETKPTIADDSKTR
Sequences:
>Translated_264_residues MSDSIEKNAWQALRAFTNARIALGRAGNSLPTAPLLAFNLSHAQARDAVHHPLDVDVLHEQLRTLGFSTLDVHSAAPDRA HYLRRPDMGRRLSDESREALTHAAASEAPDVVFVIADGLSAFAASKQSVPFLQAVTKRLAGWKIGPVVVARQSRVALGDE IGELLRSKLVVMLIGERPGLSSPDSLGVYLTYAPKVGCSDAQRNCISNVRPEGLDYEAAAHKLHYLLTHARRLGLTGVGL KDDSDALLQAPETKPTIADDSKTR >Mature_263_residues SDSIEKNAWQALRAFTNARIALGRAGNSLPTAPLLAFNLSHAQARDAVHHPLDVDVLHEQLRTLGFSTLDVHSAAPDRAH YLRRPDMGRRLSDESREALTHAAASEAPDVVFVIADGLSAFAASKQSVPFLQAVTKRLAGWKIGPVVVARQSRVALGDEI GELLRSKLVVMLIGERPGLSSPDSLGVYLTYAPKVGCSDAQRNCISNVRPEGLDYEAAAHKLHYLLTHARRLGLTGVGLK DDSDALLQAPETKPTIADDSKTR
Specific function: Ethanolamine utilization. [C]
COG id: COG4302
COG function: function code E; Ethanolamine ammonia-lyase, small subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutC family [H]
Homologues:
Organism=Escherichia coli, GI1788781, Length=213, Percent_Identity=41.7840375586854, Blast_Score=130, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009246 [H]
Pfam domain/function: PF05985 EutC [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 28506; Mature: 28374
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSIEKNAWQALRAFTNARIALGRAGNSLPTAPLLAFNLSHAQARDAVHHPLDVDVLHE CCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHEEEECCHHHHHHHHCCCCCHHHHHH QLRTLGFSTLDVHSAAPDRAHYLRRPDMGRRLSDESREALTHAAASEAPDVVFVIADGLS HHHHHCCCCEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHH AFAASKQSVPFLQAVTKRLAGWKIGPVVVARQSRVALGDEIGELLRSKLVVMLIGERPGL HHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHCEEEEEECCCCCC SSPDSLGVYLTYAPKVGCSDAQRNCISNVRPEGLDYEAAAHKLHYLLTHARRLGLTGVGL CCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC KDDSDALLQAPETKPTIADDSKTR CCCCHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SDSIEKNAWQALRAFTNARIALGRAGNSLPTAPLLAFNLSHAQARDAVHHPLDVDVLHE CCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHEEEECCHHHHHHHHCCCCCHHHHHH QLRTLGFSTLDVHSAAPDRAHYLRRPDMGRRLSDESREALTHAAASEAPDVVFVIADGLS HHHHHCCCCEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHH AFAASKQSVPFLQAVTKRLAGWKIGPVVVARQSRVALGDEIGELLRSKLVVMLIGERPGL HHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHCEEEEEECCCCCC SSPDSLGVYLTYAPKVGCSDAQRNCISNVRPEGLDYEAAAHKLHYLLTHARRLGLTGVGL CCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC KDDSDALLQAPETKPTIADDSKTR CCCCHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]