| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222565
Identifier: 183222565
GI number: 183222565
Start: 3333612
End: 3334343
Strand: Reverse
Name: 183222565
Synonym: LEPBI_I3220
Alternate gene names: NA
Gene position: 3334343-3333612 (Counterclockwise)
Preceding gene: 183222579
Following gene: 183222564
Centisome position: 92.63
GC content: 38.25
Gene sequence:
>732_bases ATGATACGTAAAATTCTATTTTTCGCCATAGTTTTTCCATCCTTTTTGCCACTCCTAGCAGAAAAACCCAAGTACCAATA TTTTGGGAAGGCCTACGATCTCAACACAGGAAAATACGTTTATTCCGATAACCATAAAGAATATTATAATAATGGAAAAC ACACACATTCAGAAATCCAATACAAAGATGCGAACGGAAAAGTATTTGGATCCAAACACATAGAATTTGATCAAAATTCC GAAGTTCCTACCTTCAAAACGGTGGACGAAAGGGATGGTTATACGGAAGGAGCGGACGTAAAAGGAAGGACAGTTCGATT ATTTTATAAACGAAAAAAGGAAGACCCACTTTCGGAAAAAACCTACAACCCGAAAACTCCAGCCGTCATGGACGGTGGGT TTGATTATTTTGTGAGGAACCATTGGGACGAATTGTCTCGGGGTGAAAGACTATCCTTTCATTTCATCGCACCAGTTCAG TTAGATGACTATAAGTTTGCGGTTTTAAAAATCAAGGATGGGGAATGGAAAGGAAGACAGGCACTCTACCTCCGTTTGGA GATCGACAATTTTGTTTTGAAACAAGTGGTAAAACCCTTCCTTTTGGTCTACGATGTACAAACACGAAGGATATTACAAT TTGATGGCCTATCCAATATCAATGATGAGAATGGGAAAAGTTTAAAAGTAAAAATCGTTTACGATTATCCGAAGGAAGTT TTGGAACCTTGA
Upstream 100 bases:
>100_bases TGGTGTCTTGGTCTTGTAGGACAGTTGTTGTGAGTTTGGAAACAATGCCTAAAAGTGTCCTTTGGTCGGTCAGTCTGTAT TTTTTCATGGTCTAAGGAAT
Downstream 100 bases:
>100_bases CAAAGAGGAGTTTTGAGCAATTTTTTAAAAACCCTCGGTTGTGGAGAGAGGATTTAGTCGCAGTTGGGGGAGATTTTTCC GTTGATCGTTTGTTATACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MIRKILFFAIVFPSFLPLLAEKPKYQYFGKAYDLNTGKYVYSDNHKEYYNNGKHTHSEIQYKDANGKVFGSKHIEFDQNS EVPTFKTVDERDGYTEGADVKGRTVRLFYKRKKEDPLSEKTYNPKTPAVMDGGFDYFVRNHWDELSRGERLSFHFIAPVQ LDDYKFAVLKIKDGEWKGRQALYLRLEIDNFVLKQVVKPFLLVYDVQTRRILQFDGLSNINDENGKSLKVKIVYDYPKEV LEP
Sequences:
>Translated_243_residues MIRKILFFAIVFPSFLPLLAEKPKYQYFGKAYDLNTGKYVYSDNHKEYYNNGKHTHSEIQYKDANGKVFGSKHIEFDQNS EVPTFKTVDERDGYTEGADVKGRTVRLFYKRKKEDPLSEKTYNPKTPAVMDGGFDYFVRNHWDELSRGERLSFHFIAPVQ LDDYKFAVLKIKDGEWKGRQALYLRLEIDNFVLKQVVKPFLLVYDVQTRRILQFDGLSNINDENGKSLKVKIVYDYPKEV LEP >Mature_243_residues MIRKILFFAIVFPSFLPLLAEKPKYQYFGKAYDLNTGKYVYSDNHKEYYNNGKHTHSEIQYKDANGKVFGSKHIEFDQNS EVPTFKTVDERDGYTEGADVKGRTVRLFYKRKKEDPLSEKTYNPKTPAVMDGGFDYFVRNHWDELSRGERLSFHFIAPVQ LDDYKFAVLKIKDGEWKGRQALYLRLEIDNFVLKQVVKPFLLVYDVQTRRILQFDGLSNINDENGKSLKVKIVYDYPKEV LEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28583; Mature: 28583
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKILFFAIVFPSFLPLLAEKPKYQYFGKAYDLNTGKYVYSDNHKEYYNNGKHTHSEIQ CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCHHHHCCCCCCCCEEE YKDANGKVFGSKHIEFDQNSEVPTFKTVDERDGYTEGADVKGRTVRLFYKRKKEDPLSEK EECCCCEEEECEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC TYNPKTPAVMDGGFDYFVRNHWDELSRGERLSFHFIAPVQLDDYKFAVLKIKDGEWKGRQ CCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEEEEEEECCCCCCCE ALYLRLEIDNFVLKQVVKPFLLVYDVQTRRILQFDGLSNINDENGKSLKVKIVYDYPKEV EEEEEEECCHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEEECCHHH LEP HCC >Mature Secondary Structure MIRKILFFAIVFPSFLPLLAEKPKYQYFGKAYDLNTGKYVYSDNHKEYYNNGKHTHSEIQ CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCHHHHCCCCCCCCEEE YKDANGKVFGSKHIEFDQNSEVPTFKTVDERDGYTEGADVKGRTVRLFYKRKKEDPLSEK EECCCCEEEECEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC TYNPKTPAVMDGGFDYFVRNHWDELSRGERLSFHFIAPVQLDDYKFAVLKIKDGEWKGRQ CCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEEEEEEECCCCCCCE ALYLRLEIDNFVLKQVVKPFLLVYDVQTRRILQFDGLSNINDENGKSLKVKIVYDYPKEV EEEEEEECCHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEEECCHHH LEP HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA