| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is pstS1 [H]
Identifier: 183222505
GI number: 183222505
Start: 3272437
End: 3273348
Strand: Reverse
Name: pstS1 [H]
Synonym: LEPBI_I3160
Alternate gene names: 183222505
Gene position: 3273348-3272437 (Counterclockwise)
Preceding gene: 183222507
Following gene: 183222499
Centisome position: 90.93
GC content: 40.24
Gene sequence:
>912_bases ATGAAAAACCTTTCTCTGCTTTTTTACATTTTAATTACAATCAATTTTGTCGCATGTAAGGACAAACAAACCCTTAAGGT TGCCGGGTCAGAAACCATGAACAGCATGATGCTATTTTTGGGAACGGAATATGAAAAAACAAATTCAAATGTTCGTGTAA CAGTAGAAGGTGGTGGTTCGGAAGCAGGGATTGACCGCCTCCGAAAAGGAGAAATTGATATGGCAGTTTCTTCTCGTGAC TTAAACCAAGCCGAGTTCGATGACCTTCGCAAAACTGGGAACTTGGAAAAAGTGCGTTTGGCTTACGATGGTGTGGCTCT GGTTGTGAATCCAAAAAACCCTGTGGCAAAACTCAATTTGGTCCAAACGTCCGATATCTTTTCTGGAAAAATTAAAAACT GGAAAGAAGTGGGAGGGTCAGATGCTCCGATCGCCATTGTGATCCGTAACGATAAATCAGGAACGCAAGACTATTTCCAA AATCATATTTTGAAACGAAAAGATCTGGGTCCCGATGAATATACTAAGTTCAAATCCAATGTGTTTTCCCCTAATGCCAA AATCGTAAAAGACAATGCAGAAATGGCAAAATTCATCCAAGATAATCCAAATAGCATTGGTTATATGGGAATGGGATCTG CACTTGTGGATCATAAAGACAAAATAAAAGCACTCGATTATGCCAGAAATCCCAAAGATCCATACGTGGCACCATCTGTA AGAAATGTTTACGACCGTAAGTACAGACTGGCTCGTGAATTGTTTATGATCTATAAAACAGACCAAGGTGATAAAATTGA TGCCTTTGTTACGTTTCTCACAAGCGAACAAGGACAGGTAGCAGTGTTACAATCGGGTTATCTCAGAGCCTCTCTTCCGG AAGTGGAAGTGTCTGCTGAACCAGTGAAATAA
Upstream 100 bases:
>100_bases AAGATCGGGGTTTTTTCATAAAAACTGAGGGTGGAATTGGAAAAAACCGCGCCTTTTTGCGATTGACGGAGGACGGAATT TGGGCTTTACCTGAATAACG
Downstream 100 bases:
>100_bases TAAATTGGATTCCAATCTTTCCGCGATGGAATGAAACTACATGTTCCTTCGTTGCGGGAAGGTATCTATTTCAAGAGAGG TTCCATTTCCCTTCTAATTT
Product: putative ABC transporter periplasmic phosphate-binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MKNLSLLFYILITINFVACKDKQTLKVAGSETMNSMMLFLGTEYEKTNSNVRVTVEGGGSEAGIDRLRKGEIDMAVSSRD LNQAEFDDLRKTGNLEKVRLAYDGVALVVNPKNPVAKLNLVQTSDIFSGKIKNWKEVGGSDAPIAIVIRNDKSGTQDYFQ NHILKRKDLGPDEYTKFKSNVFSPNAKIVKDNAEMAKFIQDNPNSIGYMGMGSALVDHKDKIKALDYARNPKDPYVAPSV RNVYDRKYRLARELFMIYKTDQGDKIDAFVTFLTSEQGQVAVLQSGYLRASLPEVEVSAEPVK
Sequences:
>Translated_303_residues MKNLSLLFYILITINFVACKDKQTLKVAGSETMNSMMLFLGTEYEKTNSNVRVTVEGGGSEAGIDRLRKGEIDMAVSSRD LNQAEFDDLRKTGNLEKVRLAYDGVALVVNPKNPVAKLNLVQTSDIFSGKIKNWKEVGGSDAPIAIVIRNDKSGTQDYFQ NHILKRKDLGPDEYTKFKSNVFSPNAKIVKDNAEMAKFIQDNPNSIGYMGMGSALVDHKDKIKALDYARNPKDPYVAPSV RNVYDRKYRLARELFMIYKTDQGDKIDAFVTFLTSEQGQVAVLQSGYLRASLPEVEVSAEPVK >Mature_303_residues MKNLSLLFYILITINFVACKDKQTLKVAGSETMNSMMLFLGTEYEKTNSNVRVTVEGGGSEAGIDRLRKGEIDMAVSSRD LNQAEFDDLRKTGNLEKVRLAYDGVALVVNPKNPVAKLNLVQTSDIFSGKIKNWKEVGGSDAPIAIVIRNDKSGTQDYFQ NHILKRKDLGPDEYTKFKSNVFSPNAKIVKDNAEMAKFIQDNPNSIGYMGMGSALVDHKDKIKALDYARNPKDPYVAPSV RNVYDRKYRLARELFMIYKTDQGDKIDAFVTFLTSEQGQVAVLQSGYLRASLPEVEVSAEPVK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 33826; Mature: 33826
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLSLLFYILITINFVACKDKQTLKVAGSETMNSMMLFLGTEYEKTNSNVRVTVEGGGS CCCHHHHHHHHHHHHEEEECCCCEEEEECCHHHHHEEEEEECCCCCCCCCEEEEEECCCC EAGIDRLRKGEIDMAVSSRDLNQAEFDDLRKTGNLEKVRLAYDGVALVVNPKNPVAKLNL HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCEEEEE VQTSDIFSGKIKNWKEVGGSDAPIAIVIRNDKSGTQDYFQNHILKRKDLGPDEYTKFKSN EEECCHHCCCCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH VFSPNAKIVKDNAEMAKFIQDNPNSIGYMGMGSALVDHKDKIKALDYARNPKDPYVAPSV CCCCCCEEEECCHHHHHHHHCCCCCEEEEECCCHHHCCHHHHHHHHHCCCCCCCCCCCHH RNVYDRKYRLARELFMIYKTDQGDKIDAFVTFLTSEQGQVAVLQSGYLRASLPEVEVSAE HHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEEECCCCCEEEEECCCEEECCCCCCCCCC PVK CCC >Mature Secondary Structure MKNLSLLFYILITINFVACKDKQTLKVAGSETMNSMMLFLGTEYEKTNSNVRVTVEGGGS CCCHHHHHHHHHHHHEEEECCCCEEEEECCHHHHHEEEEEECCCCCCCCCEEEEEECCCC EAGIDRLRKGEIDMAVSSRDLNQAEFDDLRKTGNLEKVRLAYDGVALVVNPKNPVAKLNL HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCEEEEE VQTSDIFSGKIKNWKEVGGSDAPIAIVIRNDKSGTQDYFQNHILKRKDLGPDEYTKFKSN EEECCHHCCCCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH VFSPNAKIVKDNAEMAKFIQDNPNSIGYMGMGSALVDHKDKIKALDYARNPKDPYVAPSV CCCCCCEEEECCHHHHHHHHCCCCCEEEEECCCHHHCCHHHHHHHHHCCCCCCCCCCCHH RNVYDRKYRLARELFMIYKTDQGDKIDAFVTFLTSEQGQVAVLQSGYLRASLPEVEVSAE HHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEEECCCCCEEEEECCCEEECCCCCCCCCC PVK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12354221 [H]