| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is luxQ [H]
Identifier: 183222499
GI number: 183222499
Start: 3267830
End: 3270262
Strand: Reverse
Name: luxQ [H]
Synonym: LEPBI_I3154
Alternate gene names: 183222499
Gene position: 3270262-3267830 (Counterclockwise)
Preceding gene: 183222505
Following gene: 183222494
Centisome position: 90.85
GC content: 37.28
Gene sequence:
>2433_bases ATGATTTTCACAGTCTCCATCTCATCTATCCAAAAATCTTTTTCTACCTTAGTAAAATTTTGTCGTTATCCCTTAATTTT GGTCTTTGCCCTCCTTTTCTCCCAATCATGCCACTTGGATGTTTCCCCAACCTTACTGGCGAAAGATGGTGTTTTGGACG TAAGGATGGCCAATTTATCAGAAGACACTGTGAACTTGATTGGAAAGTGGGAATTCTATTGGAATGAATTCTTAGATCCA AAACAAATCTCTCCAACGAATATTTCCTATCTTTCTGTAGGGGTTCCTTGGTTTTCGCAAGCCAATGAAGACGGTGTCGA TTATCCAAGTTTTGGATATGCGAGTTATCGGCTGACCATCCTATTACCACCCAAAACAGAAGAAAGGGAAACATATGCAC TTCTCATCCCTGTTCTGCATAGTGCCTACAAAATATACGCCAATGGTAAGTTAGTTGCTGAGAATGGAATCATTGGAAAA AATGATACAACTCACAAGCCATCATTTCATACAAAGATTATTCCTTTAATCGATATCAATCAAAAAGTAGATTTGGTCAT CCATATTTCCAATTTCTCCCATAAATATGCGGGGATTCATGGAATCATTCGATTTGGTAAATTGGAAAAGATCATTCAAG TTTGGAACGAATACCACTCCGCGACATGCATCATTTTGATATTTATGGGATTATTATCCATATATCATGCGTTAGTTTAT GCGATCAATCGATCAGAAAAAAATGCACTAAGGATGTCCTTTGTTTATTTAGGAATCTTGATTTTAAGTGCAACATTAAC TGAAACTAGAATTTTATTTAATTTTTTATCGGATGATTATTGTATTCCTCTGTTTCGGTTATCAAGAGTAGGGTTCGTCA TCGTCTTGTACTTTGGAGGAAGTGTTTTATTCTCCTTAGCCCAAATGCGTATCTTCAAAAAGATGTTAGTGCTTTTAAAA ATTTACTCACTAACATTTCTTATGGTTTCTCTTTTGACTCCCATCAAACATTTAGCTCTTGTTAGTTACTATTTTGAGTT TTTTTCAGTGATTTTTGTTATTTTAGGATTAATTTCTGTTTCCCTTGCTTTATACTTCCAACGAAAAGAAAGTAAGTTAT ACTTTTTTAGTTTGTTACTTGCCGTGATTGGAGGCATCATTGATGTCATATTGATTTCGAATCCTAATTTGGGATTTAGA CCGATGGGACTCATTTCATTGTATTTATTTATTTTTCCGCAGACCTTAGGGGTTACATTTGGACTCATCAGAGTGTATAA ACGATCTGAGTCAATTTCTAAGGAACTCTACAAAAGAAAAGAAGCACTCGAAAAAAAAGTAAAAGCTCGCACGGATGAAT TGGAAAAGGCAAATCGTTGGAAGGCAAACTTTGTATCTTTGATTTCGCATGACTTACGTTCGCCGCTCAATAGTGTGAAT CAAATTTTGGATGTGATTGATTTTAGTTTTAGCGAAACTTCAGAAGAAGAAAAAAAGAAATTTTTAGATATTTGTAAAAC AGGTGTCACTCAGTCTCTCAAAATGTTGGAACAACTATTAGATGTAAGTCGTTTTGATGCTTTTGGAACAAAACTCATCC AAACCAAATTTTCTGTGAATGATCTGTTGAACGAAATCATTGAGTCGGTCGAACCACTCGCCACTCTGAAAGGGATTCGG ATCCAAAAAGACACTCCCATCGAAGCCGAAATCATTGCTGACAGAACTCTCATCGGTGAGGTGTTTAAAAATATTCTCAC AAACTCAATTAAGTATTCCTACTTAAACTCTGAAGTTTGGGTTGGAGTATCCTATAAAGGGAAGTGGCTGAGTGTGGAAA TCAGAGACCGCGGGCTTGGGATGAGTGAAGAACAAATCCACAAACTCACAGGGGAAGAAAATATCAAAAGTACACCGGGT ACAGCGGGTGAACGTGGCACTGGACTTGGTTTACAGCTTTGTAATAATATTTTAGAAGCACATTTTGGAAAACTTAGGAT CAAGTCTGTCCTTGGAGTTGGCTCATCCTTTGAGATTTCACTTTCCAAAAGTACCAAGTCAGTGTTACTTGTTGATGATT CTGGGAACTTTAGGTCAGACTTAGCGGAGGTTATGCGAAGGAATCAATGGATTGTGATCGAAGCCGGGAATGGAGAAGAA GCCCTTTCCCATTTGGCAAGGATCACACCATCTCTCATCATCACGGACTTACATATGCCTGGGATGAATGGAATCTCTCT CATCCACGAATGGGAAGGTCGCAGAAATCAAAACCAAAAAATACCCATCATCCTCATCAGTTCCGATGCCCCTCTTTCAG GAGGAAATTCCTTCTTAGAAGAGGAGGGTTTGGAAACCATTGTTTCTGCCTATTTTTCAAAAATGTACAAAGCAGAAGAT TTATGTGAACAAATCGAAATGATTTTAATGTAA
Upstream 100 bases:
>100_bases CAAGAGAAAAGAAAGGATTGGATTTCAGAATAGATATGATTCCTTCAGTGACAACGGAATGGTCTTCTAAGATGGCAATT TTAACGGATTCCACAGCCTT
Downstream 100 bases:
>100_bases CAAACGTTCCATGTGATTTTTGATATGAAGGGTATGGGCCAAATCATATTCTTCTTTGGTCAATTCTCCATACGCAAAAT GTGGCCGAAGGGAAGATTCT
Product: putative regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 810; Mature: 810
Protein sequence:
>810_residues MIFTVSISSIQKSFSTLVKFCRYPLILVFALLFSQSCHLDVSPTLLAKDGVLDVRMANLSEDTVNLIGKWEFYWNEFLDP KQISPTNISYLSVGVPWFSQANEDGVDYPSFGYASYRLTILLPPKTEERETYALLIPVLHSAYKIYANGKLVAENGIIGK NDTTHKPSFHTKIIPLIDINQKVDLVIHISNFSHKYAGIHGIIRFGKLEKIIQVWNEYHSATCIILIFMGLLSIYHALVY AINRSEKNALRMSFVYLGILILSATLTETRILFNFLSDDYCIPLFRLSRVGFVIVLYFGGSVLFSLAQMRIFKKMLVLLK IYSLTFLMVSLLTPIKHLALVSYYFEFFSVIFVILGLISVSLALYFQRKESKLYFFSLLLAVIGGIIDVILISNPNLGFR PMGLISLYLFIFPQTLGVTFGLIRVYKRSESISKELYKRKEALEKKVKARTDELEKANRWKANFVSLISHDLRSPLNSVN QILDVIDFSFSETSEEEKKKFLDICKTGVTQSLKMLEQLLDVSRFDAFGTKLIQTKFSVNDLLNEIIESVEPLATLKGIR IQKDTPIEAEIIADRTLIGEVFKNILTNSIKYSYLNSEVWVGVSYKGKWLSVEIRDRGLGMSEEQIHKLTGEENIKSTPG TAGERGTGLGLQLCNNILEAHFGKLRIKSVLGVGSSFEISLSKSTKSVLLVDDSGNFRSDLAEVMRRNQWIVIEAGNGEE ALSHLARITPSLIITDLHMPGMNGISLIHEWEGRRNQNQKIPIILISSDAPLSGGNSFLEEEGLETIVSAYFSKMYKAED LCEQIEMILM
Sequences:
>Translated_810_residues MIFTVSISSIQKSFSTLVKFCRYPLILVFALLFSQSCHLDVSPTLLAKDGVLDVRMANLSEDTVNLIGKWEFYWNEFLDP KQISPTNISYLSVGVPWFSQANEDGVDYPSFGYASYRLTILLPPKTEERETYALLIPVLHSAYKIYANGKLVAENGIIGK NDTTHKPSFHTKIIPLIDINQKVDLVIHISNFSHKYAGIHGIIRFGKLEKIIQVWNEYHSATCIILIFMGLLSIYHALVY AINRSEKNALRMSFVYLGILILSATLTETRILFNFLSDDYCIPLFRLSRVGFVIVLYFGGSVLFSLAQMRIFKKMLVLLK IYSLTFLMVSLLTPIKHLALVSYYFEFFSVIFVILGLISVSLALYFQRKESKLYFFSLLLAVIGGIIDVILISNPNLGFR PMGLISLYLFIFPQTLGVTFGLIRVYKRSESISKELYKRKEALEKKVKARTDELEKANRWKANFVSLISHDLRSPLNSVN QILDVIDFSFSETSEEEKKKFLDICKTGVTQSLKMLEQLLDVSRFDAFGTKLIQTKFSVNDLLNEIIESVEPLATLKGIR IQKDTPIEAEIIADRTLIGEVFKNILTNSIKYSYLNSEVWVGVSYKGKWLSVEIRDRGLGMSEEQIHKLTGEENIKSTPG TAGERGTGLGLQLCNNILEAHFGKLRIKSVLGVGSSFEISLSKSTKSVLLVDDSGNFRSDLAEVMRRNQWIVIEAGNGEE ALSHLARITPSLIITDLHMPGMNGISLIHEWEGRRNQNQKIPIILISSDAPLSGGNSFLEEEGLETIVSAYFSKMYKAED LCEQIEMILM >Mature_810_residues MIFTVSISSIQKSFSTLVKFCRYPLILVFALLFSQSCHLDVSPTLLAKDGVLDVRMANLSEDTVNLIGKWEFYWNEFLDP KQISPTNISYLSVGVPWFSQANEDGVDYPSFGYASYRLTILLPPKTEERETYALLIPVLHSAYKIYANGKLVAENGIIGK NDTTHKPSFHTKIIPLIDINQKVDLVIHISNFSHKYAGIHGIIRFGKLEKIIQVWNEYHSATCIILIFMGLLSIYHALVY AINRSEKNALRMSFVYLGILILSATLTETRILFNFLSDDYCIPLFRLSRVGFVIVLYFGGSVLFSLAQMRIFKKMLVLLK IYSLTFLMVSLLTPIKHLALVSYYFEFFSVIFVILGLISVSLALYFQRKESKLYFFSLLLAVIGGIIDVILISNPNLGFR PMGLISLYLFIFPQTLGVTFGLIRVYKRSESISKELYKRKEALEKKVKARTDELEKANRWKANFVSLISHDLRSPLNSVN QILDVIDFSFSETSEEEKKKFLDICKTGVTQSLKMLEQLLDVSRFDAFGTKLIQTKFSVNDLLNEIIESVEPLATLKGIR IQKDTPIEAEIIADRTLIGEVFKNILTNSIKYSYLNSEVWVGVSYKGKWLSVEIRDRGLGMSEEQIHKLTGEENIKSTPG TAGERGTGLGLQLCNNILEAHFGKLRIKSVLGVGSSFEISLSKSTKSVLLVDDSGNFRSDLAEVMRRNQWIVIEAGNGEE ALSHLARITPSLIITDLHMPGMNGISLIHEWEGRRNQNQKIPIILISSDAPLSGGNSFLEEEGLETIVSAYFSKMYKAED LCEQIEMILM
Specific function: At low cell density, in absence of AI-2 (autoinducer 2), luxQ has a kinase activity and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is t
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788713, Length=344, Percent_Identity=23.8372093023256, Blast_Score=91, Evalue=4e-19, Organism=Escherichia coli, GI145693157, Length=252, Percent_Identity=26.984126984127, Blast_Score=88, Evalue=3e-18, Organism=Escherichia coli, GI48994928, Length=372, Percent_Identity=23.6559139784946, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI87081816, Length=382, Percent_Identity=24.3455497382199, Blast_Score=79, Evalue=2e-15, Organism=Escherichia coli, GI1788393, Length=214, Percent_Identity=25.2336448598131, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1786912, Length=230, Percent_Identity=22.1739130434783, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788549, Length=220, Percent_Identity=25, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1789149, Length=233, Percent_Identity=24.0343347639485, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 91543; Mature: 91543
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFTVSISSIQKSFSTLVKFCRYPLILVFALLFSQSCHLDVSPTLLAKDGVLDVRMANLS CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCCC EDTVNLIGKWEFYWNEFLDPKQISPTNISYLSVGVPWFSQANEDGVDYPSFGYASYRLTI CHHHHHHEEEHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEE LLPPKTEERETYALLIPVLHSAYKIYANGKLVAENGIIGKNDTTHKPSFHTKIIPLIDIN EECCCCCCCCHHHHHHHHHHHHHEEEECCEEEECCCEECCCCCCCCCCCCEEEEEEEECC QKVDLVIHISNFSHKYAGIHGIIRFGKLEKIIQVWNEYHSATCIILIFMGLLSIYHALVY CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AINRSEKNALRMSFVYLGILILSATLTETRILFNFLSDDYCIPLFRLSRVGFVIVLYFGG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEEEEEHHH SVLFSLAQMRIFKKMLVLLKIYSLTFLMVSLLTPIKHLALVSYYFEFFSVIFVILGLISV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLALYFQRKESKLYFFSLLLAVIGGIIDVILISNPNLGFRPMGLISLYLFIFPQTLGVTF HHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH GLIRVYKRSESISKELYKRKEALEKKVKARTDELEKANRWKANFVSLISHDLRSPLNSVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QILDVIDFSFSETSEEEKKKFLDICKTGVTQSLKMLEQLLDVSRFDAFGTKLIQTKFSVN HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLNEIIESVEPLATLKGIRIQKDTPIEAEIIADRTLIGEVFKNILTNSIKYSYLNSEVW HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEE VGVSYKGKWLSVEIRDRGLGMSEEQIHKLTGEENIKSTPGTAGERGTGLGLQLCNNILEA EEEEECCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH HFGKLRIKSVLGVGSSFEISLSKSTKSVLLVDDSGNFRSDLAEVMRRNQWIVIEAGNGEE HHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCHH ALSHLARITPSLIITDLHMPGMNGISLIHEWEGRRNQNQKIPIILISSDAPLSGGNSFLE HHHHHHHHCHHHEEEECCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHH EEGLETIVSAYFSKMYKAEDLCEQIEMILM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIFTVSISSIQKSFSTLVKFCRYPLILVFALLFSQSCHLDVSPTLLAKDGVLDVRMANLS CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCCC EDTVNLIGKWEFYWNEFLDPKQISPTNISYLSVGVPWFSQANEDGVDYPSFGYASYRLTI CHHHHHHEEEHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEE LLPPKTEERETYALLIPVLHSAYKIYANGKLVAENGIIGKNDTTHKPSFHTKIIPLIDIN EECCCCCCCCHHHHHHHHHHHHHEEEECCEEEECCCEECCCCCCCCCCCCEEEEEEEECC QKVDLVIHISNFSHKYAGIHGIIRFGKLEKIIQVWNEYHSATCIILIFMGLLSIYHALVY CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AINRSEKNALRMSFVYLGILILSATLTETRILFNFLSDDYCIPLFRLSRVGFVIVLYFGG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEEEEEHHH SVLFSLAQMRIFKKMLVLLKIYSLTFLMVSLLTPIKHLALVSYYFEFFSVIFVILGLISV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLALYFQRKESKLYFFSLLLAVIGGIIDVILISNPNLGFRPMGLISLYLFIFPQTLGVTF HHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH GLIRVYKRSESISKELYKRKEALEKKVKARTDELEKANRWKANFVSLISHDLRSPLNSVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QILDVIDFSFSETSEEEKKKFLDICKTGVTQSLKMLEQLLDVSRFDAFGTKLIQTKFSVN HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLNEIIESVEPLATLKGIRIQKDTPIEAEIIADRTLIGEVFKNILTNSIKYSYLNSEVW HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEE VGVSYKGKWLSVEIRDRGLGMSEEQIHKLTGEENIKSTPGTAGERGTGLGLQLCNNILEA EEEEECCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH HFGKLRIKSVLGVGSSFEISLSKSTKSVLLVDDSGNFRSDLAEVMRRNQWIVIEAGNGEE HHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCHH ALSHLARITPSLIITDLHMPGMNGISLIHEWEGRRNQNQKIPIILISSDAPLSGGNSFLE HHHHHHHHCHHHEEEECCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHH EEGLETIVSAYFSKMYKAEDLCEQIEMILM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7984107 [H]