| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222507
Identifier: 183222507
GI number: 183222507
Start: 3274879
End: 3276147
Strand: Reverse
Name: 183222507
Synonym: LEPBI_I3162
Alternate gene names: NA
Gene position: 3276147-3274879 (Counterclockwise)
Preceding gene: 183222508
Following gene: 183222505
Centisome position: 91.01
GC content: 41.37
Gene sequence:
>1269_bases ATGAAAGATACCTTTATCGCGCCTCGTTTTGAATTTCCTGTTGCCTTAGGATTAGATCTAGGATTTCCCATCCTCACAAA ACTTCTGTTTAATTTAGATGGAGTGGTCATCGCAAAAGAAGATGAACTACGTTTGAAGGAAACAAAGGACAAACGAGTTG TGTATCTTTTCAACCAACCCACGGAAATGGAATCCATTGTTGCCTACCAAGTTGCCAATACGATTGGAACTCGCTTTCAT TATATGGCGTCTCGCAGTATTTTCAATTGGGGATTTGGGATTGTCGGGGAAGTCATCAAACGAGTGGGGGCATTTTCCGT TTTGCACGGAAGCTCCAATCGAAATATGATTCGTACCACCAAACGAATCTTATCCGAACGTGATGGAAAACTTGTAATGT ATCCTGAAGGCATCATGTCAGGAGAAAATGATAATTTGGTATCCTTCTTACCAAGCACAGCACAACTCATATACTGGGGT TTGGAAGAAGCCAAAAAAAAGGACCCACATGCGGAACTTTTTTTACAACCCACCTTCGTGAAATATAAAATCTCTGGAAC ACGTGATTCCATTTTAAAGGACATTGAAACTTCTTTAACGCGAATCGAACGTAAATTGAAATTGTATCCAGGTGGTCGGA CCATCCTTCGTCGTTTTTTGACTGTGGGCCGAGTGATGTTGGAAGAAACGGAGTTTGAACTCGGGATTCCAAAATCGGCC ATCAATGGAAAAGATTTTGATTATCGGTTGGGACGAGCAAGGCATACGGCGCTCAACTTAGCTGGCCAAATCCTCAATCT CAAATTCCAAGATTCGGACAATGCCATCCAAAAGATCCGAATTTTATTCCATACTTTAGACCGAATTGAAGCTGGAATTC CTTTAGAGTCTACCCCCAAACACCTAACAGACCAAAATATCCGTAGGGCCAAACAATTGGTGGAAACGGCATATGCCTTT CTCATCACCCAACCCAAAAGTCTCATCCAATGGCCTTCAGCAGAGCGACTGATGGAATGGATTTGTAGTTTTGAACGGCA TATTTTTGGAAAATCGGAAATGAGGGCAAAAAAAGCCTATGTGTATGCAACGCCTTCCATTCCACTCGCATCGTATTTTC AAAAATACAAAACAAACAAAAAAGAGAGTTATCACTTGTTACTTGGTGATATTCGAAAGGAAATGGAAAAACTATTGGAG CGTGGGAAAAAGGAAAGTGAACCTTTGGTCCCTCCTTATTCGGTGGGACTCGATTTACAAATTGGTTAA
Upstream 100 bases:
>100_bases GGGAAAAGAAGTGAAAAAAATATTAGAAACTTGGGGTTACATCCACGAATAATTGCTCGTATTGATTAAGGGTTTTTTCT TAGTCTAATTACACAGTTCT
Downstream 100 bases:
>100_bases TCTAGAACGAGAGTGATTTCTACCCTTCTGTTTTTGTGCCGATTTTCTTCTGAATCATTGGGCGCGACTGGAAATTCATC CGCATACCCACGAAAGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MKDTFIAPRFEFPVALGLDLGFPILTKLLFNLDGVVIAKEDELRLKETKDKRVVYLFNQPTEMESIVAYQVANTIGTRFH YMASRSIFNWGFGIVGEVIKRVGAFSVLHGSSNRNMIRTTKRILSERDGKLVMYPEGIMSGENDNLVSFLPSTAQLIYWG LEEAKKKDPHAELFLQPTFVKYKISGTRDSILKDIETSLTRIERKLKLYPGGRTILRRFLTVGRVMLEETEFELGIPKSA INGKDFDYRLGRARHTALNLAGQILNLKFQDSDNAIQKIRILFHTLDRIEAGIPLESTPKHLTDQNIRRAKQLVETAYAF LITQPKSLIQWPSAERLMEWICSFERHIFGKSEMRAKKAYVYATPSIPLASYFQKYKTNKKESYHLLLGDIRKEMEKLLE RGKKESEPLVPPYSVGLDLQIG
Sequences:
>Translated_422_residues MKDTFIAPRFEFPVALGLDLGFPILTKLLFNLDGVVIAKEDELRLKETKDKRVVYLFNQPTEMESIVAYQVANTIGTRFH YMASRSIFNWGFGIVGEVIKRVGAFSVLHGSSNRNMIRTTKRILSERDGKLVMYPEGIMSGENDNLVSFLPSTAQLIYWG LEEAKKKDPHAELFLQPTFVKYKISGTRDSILKDIETSLTRIERKLKLYPGGRTILRRFLTVGRVMLEETEFELGIPKSA INGKDFDYRLGRARHTALNLAGQILNLKFQDSDNAIQKIRILFHTLDRIEAGIPLESTPKHLTDQNIRRAKQLVETAYAF LITQPKSLIQWPSAERLMEWICSFERHIFGKSEMRAKKAYVYATPSIPLASYFQKYKTNKKESYHLLLGDIRKEMEKLLE RGKKESEPLVPPYSVGLDLQIG >Mature_422_residues MKDTFIAPRFEFPVALGLDLGFPILTKLLFNLDGVVIAKEDELRLKETKDKRVVYLFNQPTEMESIVAYQVANTIGTRFH YMASRSIFNWGFGIVGEVIKRVGAFSVLHGSSNRNMIRTTKRILSERDGKLVMYPEGIMSGENDNLVSFLPSTAQLIYWG LEEAKKKDPHAELFLQPTFVKYKISGTRDSILKDIETSLTRIERKLKLYPGGRTILRRFLTVGRVMLEETEFELGIPKSA INGKDFDYRLGRARHTALNLAGQILNLKFQDSDNAIQKIRILFHTLDRIEAGIPLESTPKHLTDQNIRRAKQLVETAYAF LITQPKSLIQWPSAERLMEWICSFERHIFGKSEMRAKKAYVYATPSIPLASYFQKYKTNKKESYHLLLGDIRKEMEKLLE RGKKESEPLVPPYSVGLDLQIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48400; Mature: 48400
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDTFIAPRFEFPVALGLDLGFPILTKLLFNLDGVVIAKEDELRLKETKDKRVVYLFNQP CCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEECCCCCHHHCCCCCEEEEEECCC TEMESIVAYQVANTIGTRFHYMASRSIFNWGFGIVGEVIKRVGAFSVLHGSSNRNMIRTT CCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCEEEEECCCCCCHHHHH KRILSERDGKLVMYPEGIMSGENDNLVSFLPSTAQLIYWGLEEAKKKDPHAELFLQPTFV HHHHHCCCCCEEEECCHHCCCCCCCEEEECCCHHHHHEECHHHHHCCCCCCEEEEEEEEE KYKISGTRDSILKDIETSLTRIERKLKLYPGGRTILRRFLTVGRVMLEETEFELGIPKSA EEEECCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH INGKDFDYRLGRARHTALNLAGQILNLKFQDSDNAIQKIRILFHTLDRIEAGIPLESTPK CCCCCCCHHHCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC HLTDQNIRRAKQLVETAYAFLITQPKSLIQWPSAERLMEWICSFERHIFGKSEMRAKKAY CCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCEEE VYATPSIPLASYFQKYKTNKKESYHLLLGDIRKEMEKLLERGKKESEPLVPPYSVGLDLQ EEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE IG EC >Mature Secondary Structure MKDTFIAPRFEFPVALGLDLGFPILTKLLFNLDGVVIAKEDELRLKETKDKRVVYLFNQP CCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEECCCCCHHHCCCCCEEEEEECCC TEMESIVAYQVANTIGTRFHYMASRSIFNWGFGIVGEVIKRVGAFSVLHGSSNRNMIRTT CCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCEEEEECCCCCCHHHHH KRILSERDGKLVMYPEGIMSGENDNLVSFLPSTAQLIYWGLEEAKKKDPHAELFLQPTFV HHHHHCCCCCEEEECCHHCCCCCCCEEEECCCHHHHHEECHHHHHCCCCCCEEEEEEEEE KYKISGTRDSILKDIETSLTRIERKLKLYPGGRTILRRFLTVGRVMLEETEFELGIPKSA EEEECCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH INGKDFDYRLGRARHTALNLAGQILNLKFQDSDNAIQKIRILFHTLDRIEAGIPLESTPK CCCCCCCHHHCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC HLTDQNIRRAKQLVETAYAFLITQPKSLIQWPSAERLMEWICSFERHIFGKSEMRAKKAY CCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCEEE VYATPSIPLASYFQKYKTNKKESYHLLLGDIRKEMEKLLERGKKESEPLVPPYSVGLDLQ EEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE IG EC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA