| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222494
Identifier: 183222494
GI number: 183222494
Start: 3263456
End: 3264025
Strand: Reverse
Name: 183222494
Synonym: LEPBI_I3149
Alternate gene names: NA
Gene position: 3264025-3263456 (Counterclockwise)
Preceding gene: 183222499
Following gene: 183222493
Centisome position: 90.68
GC content: 42.11
Gene sequence:
>570_bases ATGAAAAAAGGATTTTTTTTAAGCCTCATCCTCCTCGTAGGTCTTTCTATTTCATTCACGAATTGTTCGTCTTCTGAAGA AAAAGAAACTCCAAAAGAAACAACGTCCACAACTACGGACAACACAACAGCAGTTTCATCCAGAGATCTCAATGGAGCTC TTTTGGACGAAATCAACGTAGCACTCAAAGACTACCGTTACCCAGATGGCGTTCGTCGCAGAGGATTTAGCTACAAACAA GCTGACATCCAAGCAGAAGATTTCAAAACTTGGGCAAAAGACAATGTTGCTTACATCAAAGACGCTCTTGCAAAACTCCC TGAAGGGTATGCATTAGAAATCACAGGACATGCTGATGCATCTGGTCCAGAAGAAGCAGAAGGCGCTAAAAAAGGAAACG GATTCTACTCACAAATTCGTTCTGACGCAATGAAAGACGCACTCGTAAAACAAGGGATCCCTGCGGAAAGAATCGTAACA AAAGCTGCTGGTTCTTCCAAACCAATCTCTGGTTTTGATGAAAAAGACGCGATCAACCGTCGTGTGACTTTCCAAGTCGT TTCTAAATAA
Upstream 100 bases:
>100_bases CTTTGGTCATAATCTTCGGAAACAGTTACAAATATTTGCATTTTCGGTTGTTATCTAATGAAAAGAACTAAACTATGGAA ACATTAAGGCAGGTCAACTG
Downstream 100 bases:
>100_bases GAAATTCTATTTTCTTACTAGAGACCTTTCTCTAATAAAAGCCCACCACTTGGTGGGTTTTTTTATGCCCATTGGATGTT ACTAAATTGTTTGGAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MKKGFFLSLILLVGLSISFTNCSSSEEKETPKETTSTTTDNTTAVSSRDLNGALLDEINVALKDYRYPDGVRRRGFSYKQ ADIQAEDFKTWAKDNVAYIKDALAKLPEGYALEITGHADASGPEEAEGAKKGNGFYSQIRSDAMKDALVKQGIPAERIVT KAAGSSKPISGFDEKDAINRRVTFQVVSK
Sequences:
>Translated_189_residues MKKGFFLSLILLVGLSISFTNCSSSEEKETPKETTSTTTDNTTAVSSRDLNGALLDEINVALKDYRYPDGVRRRGFSYKQ ADIQAEDFKTWAKDNVAYIKDALAKLPEGYALEITGHADASGPEEAEGAKKGNGFYSQIRSDAMKDALVKQGIPAERIVT KAAGSSKPISGFDEKDAINRRVTFQVVSK >Mature_189_residues MKKGFFLSLILLVGLSISFTNCSSSEEKETPKETTSTTTDNTTAVSSRDLNGALLDEINVALKDYRYPDGVRRRGFSYKQ ADIQAEDFKTWAKDNVAYIKDALAKLPEGYALEITGHADASGPEEAEGAKKGNGFYSQIRSDAMKDALVKQGIPAERIVT KAAGSSKPISGFDEKDAINRRVTFQVVSK
Specific function: Unknown
COG id: COG2885
COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20610; Mature: 20610
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS51123 OMPA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGFFLSLILLVGLSISFTNCSSSEEKETPKETTSTTTDNTTAVSSRDLNGALLDEINV CCCHHHHHHHHHHCCCCEECCCCCCCHHCCCCHHCCCCCCCCEECCCCCCCCHHHHHHHH ALKDYRYPDGVRRRGFSYKQADIQAEDFKTWAKDNVAYIKDALAKLPEGYALEITGHADA HHHHCCCCCHHHHCCCCCCHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCC SGPEEAEGAKKGNGFYSQIRSDAMKDALVKQGIPAERIVTKAAGSSKPISGFDEKDAINR CCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHCC RVTFQVVSK EEEEEEECC >Mature Secondary Structure MKKGFFLSLILLVGLSISFTNCSSSEEKETPKETTSTTTDNTTAVSSRDLNGALLDEINV CCCHHHHHHHHHHCCCCEECCCCCCCHHCCCCHHCCCCCCCCEECCCCCCCCHHHHHHHH ALKDYRYPDGVRRRGFSYKQADIQAEDFKTWAKDNVAYIKDALAKLPEGYALEITGHADA HHHHCCCCCHHHHCCCCCCHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCC SGPEEAEGAKKGNGFYSQIRSDAMKDALVKQGIPAERIVTKAAGSSKPISGFDEKDAINR CCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHCC RVTFQVVSK EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA