| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222271
Identifier: 183222271
GI number: 183222271
Start: 3019878
End: 3020393
Strand: Direct
Name: 183222271
Synonym: LEPBI_I2922
Alternate gene names: NA
Gene position: 3019878-3020393 (Clockwise)
Preceding gene: 183222270
Following gene: 183222272
Centisome position: 83.89
GC content: 37.79
Gene sequence:
>516_bases ATGGATCCACTGATTGATGAAAAATTCATTTTGACGGTTTCACAAGTATTACCGGAACATTTTTACAAAACCTTACTTGT GTTTGCCGATAGAGAGGCCTACGGGCCTTCCAAAAATGAAGGGCTTTGTTTTGAAAATTGTACACTCGTTGAATTTGTAG GAGATATCAACGGAAAACTTTATTTAGCTTTAGATGGGTATACCAAACTCAAACTTTTACCAAAAATTGCAAAAGCCTTT CAGATCGATCCCACATCGAGATCCCACTCTGCATCCATCATGATGGAATTTGCCAACCAAATCGCAGGAAAATTGATTAC TGAAATGCGACTTGGCCGTTATGAAATCGATATTTTACCTCCTGAAAATTTAAACCATAAACTTGTTCCCATCTCGCTGG AACACTTCCGCCAATACATTCTGATCTTTAACTTAAAAGACAGGCGTGGGGATGAATACATGGGAAGATTGTACTTGATT TTATTGTTGGAAAAATTCCCTACTCCCCAAAACTAA
Upstream 100 bases:
>100_bases TGGATATTCTAATCCTACCACCCCCGATTTAAAATTTGATGTTTGGATCAAAAAAGCATATAGTTCCTTGGAAGAAAGTA TCCTTTACCACGCCGCCTAA
Downstream 100 bases:
>100_bases AGTCGAATGAAACCTTATGTTTTGGCACTCCCACTCATTTTGAGTTATGCAGGACTAAAACAAAAAAAATCTTTAGAACG TAAGGAATTCACTCTACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MDPLIDEKFILTVSQVLPEHFYKTLLVFADREAYGPSKNEGLCFENCTLVEFVGDINGKLYLALDGYTKLKLLPKIAKAF QIDPTSRSHSASIMMEFANQIAGKLITEMRLGRYEIDILPPENLNHKLVPISLEHFRQYILIFNLKDRRGDEYMGRLYLI LLLEKFPTPQN
Sequences:
>Translated_171_residues MDPLIDEKFILTVSQVLPEHFYKTLLVFADREAYGPSKNEGLCFENCTLVEFVGDINGKLYLALDGYTKLKLLPKIAKAF QIDPTSRSHSASIMMEFANQIAGKLITEMRLGRYEIDILPPENLNHKLVPISLEHFRQYILIFNLKDRRGDEYMGRLYLI LLLEKFPTPQN >Mature_171_residues MDPLIDEKFILTVSQVLPEHFYKTLLVFADREAYGPSKNEGLCFENCTLVEFVGDINGKLYLALDGYTKLKLLPKIAKAF QIDPTSRSHSASIMMEFANQIAGKLITEMRLGRYEIDILPPENLNHKLVPISLEHFRQYILIFNLKDRRGDEYMGRLYLI LLLEKFPTPQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19753; Mature: 19753
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPLIDEKFILTVSQVLPEHFYKTLLVFADREAYGPSKNEGLCFENCTLVEFVGDINGKL CCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCCCEEEECCCCCEE YLALDGYTKLKLLPKIAKAFQIDPTSRSHSASIMMEFANQIAGKLITEMRLGRYEIDILP EEEECCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC PENLNHKLVPISLEHFRQYILIFNLKDRRGDEYMGRLYLILLLEKFPTPQN CCCCCCEEEEEEHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDPLIDEKFILTVSQVLPEHFYKTLLVFADREAYGPSKNEGLCFENCTLVEFVGDINGKL CCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCCCEEEECCCCCEE YLALDGYTKLKLLPKIAKAFQIDPTSRSHSASIMMEFANQIAGKLITEMRLGRYEIDILP EEEECCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC PENLNHKLVPISLEHFRQYILIFNLKDRRGDEYMGRLYLILLLEKFPTPQN CCCCCCEEEEEEHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA