| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222270
Identifier: 183222270
GI number: 183222270
Start: 3018711
End: 3019877
Strand: Direct
Name: 183222270
Synonym: LEPBI_I2921
Alternate gene names: NA
Gene position: 3018711-3019877 (Clockwise)
Preceding gene: 183222263
Following gene: 183222271
Centisome position: 83.86
GC content: 36.93
Gene sequence:
>1167_bases ATGAAACGATATACAATTCCTACAATTTTTTTTGCCATTGGAGCGACCTTACAATTCCTATTCTATTTTTCTTGGGTGAG TTTTACCCTACTCACCGTTTCGTGCCTTCTCCTCACACTTTTTTTGTATAGTTTGGATCTACAGTCCCTACCAAACGCAC AAGAGAACGAAGCTCCAAATGACAAGACAAGTGTCACTTTAGACCTGGAGCAAACGAAATCACACAACCAAAGTTCTGAA ACAGATATTGTCTTTGATACAAACTCTCCCTTAAATTCGGATGCATCCAATGCGATAGAAATGGAAAAAGAAACGAAAGA AATCCTCTGGACCATTGATCCCATTCTCTTTGCTCGTGAATCGGTACAAATGGAAGAAAGAAAACTATTTTGTGATACTG TCAAAGAATACCCGTTTGCTTTTCAAAGTCCAAAACTATCTTCCATCCAATATGTATATTTTGATGGAAAAGAATTCAAA GAGTGTTTTTGGCAAAAATCAGAAATGCTCGTAGAAACGGATGATAACCCAATTGAGTGGAACGAATGGGAAGAAAGTAG AATCCGAGACTCTTTGCCTGTTATCTCTAAAAACAAACGTAAGTTATATGTCCCTCTGACCATCAATGCAAACCTATTCG GTTTTTTATGTTTTTCTACAAAGGAACATTGGTTAGACGAAGATACTCAAACCTTTTGGGAAGAGGTTACCAATCTCTCT GAAAAGATTTTGGCAAAACGAGAATATGCAAAGGTGACAAAACACCCGTTTACAAAACTATACACCGTTTCTCATTTTTA CCAAATTGCAAAATCATCCTTTGAAGCTTCGGAAAAGAAAACTTTGGTTCTGTTTAAGTTCATCGATACCAATTTTCAAT CAGAACTCGCGATTGGACTGAACCATCTTGGATTAAAACATTCTGTGATTGGATTGGGACTTTTTCAGTTAGAAGAAGAT CTTTATTCTGCTCTCATTCCCAATGAAAGACTAGAATCCTTTTCTTCTTTTTTCCAACAATTCATTGAGGAATTGGATCA GTTAGGTTACCCATCGGAAGTGGCAATTGGATATTCTAATCCTACCACCCCCGATTTAAAATTTGATGTTTGGATCAAAA AAGCATATAGTTCCTTGGAAGAAAGTATCCTTTACCACGCCGCCTAA
Upstream 100 bases:
>100_bases GCTAATTCGGAATAGAGTTTCATTTGCCCCTAGCGGAATCGGAAAATCATTTTAGAGAATCCCCTTTTTACCCGTTATAT TGAGTAACGGCCAAGGTACC
Downstream 100 bases:
>100_bases ATGGATCCACTGATTGATGAAAAATTCATTTTGACGGTTTCACAAGTATTACCGGAACATTTTTACAAAACCTTACTTGT GTTTGCCGATAGAGAGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKRYTIPTIFFAIGATLQFLFYFSWVSFTLLTVSCLLLTLFLYSLDLQSLPNAQENEAPNDKTSVTLDLEQTKSHNQSSE TDIVFDTNSPLNSDASNAIEMEKETKEILWTIDPILFARESVQMEERKLFCDTVKEYPFAFQSPKLSSIQYVYFDGKEFK ECFWQKSEMLVETDDNPIEWNEWEESRIRDSLPVISKNKRKLYVPLTINANLFGFLCFSTKEHWLDEDTQTFWEEVTNLS EKILAKREYAKVTKHPFTKLYTVSHFYQIAKSSFEASEKKTLVLFKFIDTNFQSELAIGLNHLGLKHSVIGLGLFQLEED LYSALIPNERLESFSSFFQQFIEELDQLGYPSEVAIGYSNPTTPDLKFDVWIKKAYSSLEESILYHAA
Sequences:
>Translated_388_residues MKRYTIPTIFFAIGATLQFLFYFSWVSFTLLTVSCLLLTLFLYSLDLQSLPNAQENEAPNDKTSVTLDLEQTKSHNQSSE TDIVFDTNSPLNSDASNAIEMEKETKEILWTIDPILFARESVQMEERKLFCDTVKEYPFAFQSPKLSSIQYVYFDGKEFK ECFWQKSEMLVETDDNPIEWNEWEESRIRDSLPVISKNKRKLYVPLTINANLFGFLCFSTKEHWLDEDTQTFWEEVTNLS EKILAKREYAKVTKHPFTKLYTVSHFYQIAKSSFEASEKKTLVLFKFIDTNFQSELAIGLNHLGLKHSVIGLGLFQLEED LYSALIPNERLESFSSFFQQFIEELDQLGYPSEVAIGYSNPTTPDLKFDVWIKKAYSSLEESILYHAA >Mature_388_residues MKRYTIPTIFFAIGATLQFLFYFSWVSFTLLTVSCLLLTLFLYSLDLQSLPNAQENEAPNDKTSVTLDLEQTKSHNQSSE TDIVFDTNSPLNSDASNAIEMEKETKEILWTIDPILFARESVQMEERKLFCDTVKEYPFAFQSPKLSSIQYVYFDGKEFK ECFWQKSEMLVETDDNPIEWNEWEESRIRDSLPVISKNKRKLYVPLTINANLFGFLCFSTKEHWLDEDTQTFWEEVTNLS EKILAKREYAKVTKHPFTKLYTVSHFYQIAKSSFEASEKKTLVLFKFIDTNFQSELAIGLNHLGLKHSVIGLGLFQLEED LYSALIPNERLESFSSFFQQFIEELDQLGYPSEVAIGYSNPTTPDLKFDVWIKKAYSSLEESILYHAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45102; Mature: 45102
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYTIPTIFFAIGATLQFLFYFSWVSFTLLTVSCLLLTLFLYSLDLQSLPNAQENEAPN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DKTSVTLDLEQTKSHNQSSETDIVFDTNSPLNSDASNAIEMEKETKEILWTIDPILFARE CCCEEEEEEHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SVQMEERKLFCDTVKEYPFAFQSPKLSSIQYVYFDGKEFKECFWQKSEMLVETDDNPIEW HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCEEEECCCCCCCC NEWEESRIRDSLPVISKNKRKLYVPLTINANLFGFLCFSTKEHWLDEDTQTFWEEVTNLS CCCHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEEEEECCHHHHCCCHHHHHHHHHHHHH EKILAKREYAKVTKHPFTKLYTVSHFYQIAKSSFEASEKKTLVLFKFIDTNFQSELAIGL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHH NHLGLKHSVIGLGLFQLEEDLYSALIPNERLESFSSFFQQFIEELDQLGYPSEVAIGYSN HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC PTTPDLKFDVWIKKAYSSLEESILYHAA CCCCCCEEHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRYTIPTIFFAIGATLQFLFYFSWVSFTLLTVSCLLLTLFLYSLDLQSLPNAQENEAPN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DKTSVTLDLEQTKSHNQSSETDIVFDTNSPLNSDASNAIEMEKETKEILWTIDPILFARE CCCEEEEEEHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SVQMEERKLFCDTVKEYPFAFQSPKLSSIQYVYFDGKEFKECFWQKSEMLVETDDNPIEW HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCEEEECCCCCCCC NEWEESRIRDSLPVISKNKRKLYVPLTINANLFGFLCFSTKEHWLDEDTQTFWEEVTNLS CCCHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEEEEECCHHHHCCCHHHHHHHHHHHHH EKILAKREYAKVTKHPFTKLYTVSHFYQIAKSSFEASEKKTLVLFKFIDTNFQSELAIGL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHH NHLGLKHSVIGLGLFQLEEDLYSALIPNERLESFSSFFQQFIEELDQLGYPSEVAIGYSN HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC PTTPDLKFDVWIKKAYSSLEESILYHAA CCCCCCEEHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA