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The map label for this gene is 183222043

Identifier: 183222043

GI number: 183222043

Start: 2782267

End: 2783103

Strand: Reverse

Name: 183222043

Synonym: LEPBI_I2685

Alternate gene names: NA

Gene position: 2783103-2782267 (Counterclockwise)

Preceding gene: 183222048

Following gene: 183222042

Centisome position: 77.32

GC content: 41.94

Gene sequence:

>837_bases
GTGAACATCCGCATTTTCATTTGTTTTTGTTTCTTTCTTGTCATCGAGTCTGTGTCTGCGTATGACCCACACTCCAACTT
GACAAGGGAAAACAAACTCCCTAAGGAATTGGAAAACATTGGATTTTCGGATGTTACAGGCAAAACGTTGCAACTCAACA
TTCCTTTTCGAGATGAATCGGGCAAAGAAGTTCTCTTTTCTGATTTTCTCGCAGCAGGGAAACCAGTCCTTCTCTCTCCC
GTTTATTTTAAATGCCCCACCCTTTGTAACTTTCACCTCAATGGTGTCTTCAAAAGTTTAAAGGATTTGGATTGGTCACT
CGGCAAAGAATACCAATACATTGCGGTATCCATCGATCCAAAAGAAAACGAATCCATTTCGTTTCCCAAAAAAGGGGCTT
ATTTGAAGGAATACGGCAGAGTGGGAGCAGATTCAGGCCTCCATTTACTCACAGGCTCACAAGAATCCATTGATGCACTC
ACCAAACAATTGGATTTTCGTTATGCTTGGGACGGCGAAGCCAAACAATACATCCATGCAAGTGGTGTGTATGTTTTGAC
TCCCGATGGGAGAGTGTCTCGGATCTTCCAAGGCATCCAACTCGAACCAAGGGATTTAAAATTTGCCTTCCTTGAGGCAT
CTTCTGGTAAGATTGGGAGTTTTGTGGACAAGTTTGCTTTATTTTGCTTTCAATTTGATCCTAGAAAAAATAAATATACG
ATATACGCATACAGGATGATGCAATTCGGGGGGGCGGTCACCTTACTCCTTCTCGGTGCGTTTTTATACATAAACTGGCG
AAAAATAACAAATAACAACCGTCAAGGAGTCACATAG

Upstream 100 bases:

>100_bases
TTTTCTTCGCGTACATTTCCTTTGTCCACCCGGGAACACCGGAAAACCCAGGAATGGAAAACAAAAGCGTTCAATCCAAA
TAGGGTAACAACCAAATTAC

Downstream 100 bases:

>100_bases
ATGTCTTGGAGCAGTCTCATTCCAGCGACCTCGTTCATGCCTATCCAGGCCACTGAAATCGCAAAAGAAGTCGATCTTCT
CTATGCATTTCTGATCATCG

Product: putative respiratory system biogenesis protein

Products: NA

Alternate protein names: SCO1/SenC Family Protein; SCO1/SenC/PrrC Family Protein; SenC/PrrC; Cytochrome C Oxidase Synthesis Factor; SenC/PrrC-Like; Respiratory System Biogenesis Protein

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MNIRIFICFCFFLVIESVSAYDPHSNLTRENKLPKELENIGFSDVTGKTLQLNIPFRDESGKEVLFSDFLAAGKPVLLSP
VYFKCPTLCNFHLNGVFKSLKDLDWSLGKEYQYIAVSIDPKENESISFPKKGAYLKEYGRVGADSGLHLLTGSQESIDAL
TKQLDFRYAWDGEAKQYIHASGVYVLTPDGRVSRIFQGIQLEPRDLKFAFLEASSGKIGSFVDKFALFCFQFDPRKNKYT
IYAYRMMQFGGAVTLLLLGAFLYINWRKITNNNRQGVT

Sequences:

>Translated_278_residues
MNIRIFICFCFFLVIESVSAYDPHSNLTRENKLPKELENIGFSDVTGKTLQLNIPFRDESGKEVLFSDFLAAGKPVLLSP
VYFKCPTLCNFHLNGVFKSLKDLDWSLGKEYQYIAVSIDPKENESISFPKKGAYLKEYGRVGADSGLHLLTGSQESIDAL
TKQLDFRYAWDGEAKQYIHASGVYVLTPDGRVSRIFQGIQLEPRDLKFAFLEASSGKIGSFVDKFALFCFQFDPRKNKYT
IYAYRMMQFGGAVTLLLLGAFLYINWRKITNNNRQGVT
>Mature_278_residues
MNIRIFICFCFFLVIESVSAYDPHSNLTRENKLPKELENIGFSDVTGKTLQLNIPFRDESGKEVLFSDFLAAGKPVLLSP
VYFKCPTLCNFHLNGVFKSLKDLDWSLGKEYQYIAVSIDPKENESISFPKKGAYLKEYGRVGADSGLHLLTGSQESIDAL
TKQLDFRYAWDGEAKQYIHASGVYVLTPDGRVSRIFQGIQLEPRDLKFAFLEASSGKIGSFVDKFALFCFQFDPRKNKYT
IYAYRMMQFGGAVTLLLLGAFLYINWRKITNNNRQGVT

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31582; Mature: 31582

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRIFICFCFFLVIESVSAYDPHSNLTRENKLPKELENIGFSDVTGKTLQLNIPFRDES
CCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCC
GKEVLFSDFLAAGKPVLLSPVYFKCPTLCNFHLNGVFKSLKDLDWSLGKEYQYIAVSIDP
CCCHHHHHHHHCCCCEEECCHHHCCCCEEEEHHHHHHHHHHHCCHHCCCCEEEEEEEECC
KENESISFPKKGAYLKEYGRVGADSGLHLLTGSQESIDALTKQLDFRYAWDGEAKQYIHA
CCCCCCCCCCCCCHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCEEEECCCCHHEEEE
SGVYVLTPDGRVSRIFQGIQLEPRDLKFAFLEASSGKIGSFVDKFALFCFQFDPRKNKYT
CCEEEECCCCHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHEEECCCCCCEE
IYAYRMMQFGGAVTLLLLGAFLYINWRKITNNNRQGVT
EEEEEEHHHCCHHHHHHHHHHHHEEEEEECCCCCCCCC
>Mature Secondary Structure
MNIRIFICFCFFLVIESVSAYDPHSNLTRENKLPKELENIGFSDVTGKTLQLNIPFRDES
CCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCC
GKEVLFSDFLAAGKPVLLSPVYFKCPTLCNFHLNGVFKSLKDLDWSLGKEYQYIAVSIDP
CCCHHHHHHHHCCCCEEECCHHHCCCCEEEEHHHHHHHHHHHCCHHCCCCEEEEEEEECC
KENESISFPKKGAYLKEYGRVGADSGLHLLTGSQESIDALTKQLDFRYAWDGEAKQYIHA
CCCCCCCCCCCCCHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCEEEECCCCHHEEEE
SGVYVLTPDGRVSRIFQGIQLEPRDLKFAFLEASSGKIGSFVDKFALFCFQFDPRKNKYT
CCEEEECCCCHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHEEECCCCCCEE
IYAYRMMQFGGAVTLLLLGAFLYINWRKITNNNRQGVT
EEEEEEHHHCCHHHHHHHHHHHHEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA