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The map label for this gene is uspF [C]

Identifier: 183222008

GI number: 183222008

Start: 2745601

End: 2746032

Strand: Reverse

Name: uspF [C]

Synonym: LEPBI_I2649

Alternate gene names: 183222008

Gene position: 2746032-2745601 (Counterclockwise)

Preceding gene: 183222009

Following gene: 183222007

Centisome position: 76.29

GC content: 41.67

Gene sequence:

>432_bases
ATGGAAAAATTAATTCAAAAGCTCATCATTCCCATTGATGGATCTCCCAGTTCCGCAAAGGCCTTGGAATTTGGACTCGC
GATTGCCAAAGCAAGTAATGCAATCTGTTATGTCGTAGAAGTCATCGAAGATTTTGGTCCATTGCCAGGGTATTACGATG
CTGCTCCTCCTGGAAAGGACCGAGTCAAATGGATCTCTGAACAAAGATTTGAAAAAATCCATCCCATTTTAGATGAGACG
ACTGTAAAATGGAATCGTGTTGTTTTGGAAGGTTATCCTGCTGAGGAAATTTGTAAATTAGCAGAAAAAGAAAAAGCCGA
TCTGATCGTGATCGGTAGCCGTGGCCATGGAATTTTAGGTCGATTCATCATGGGCAGTGTTTCTGATCGAGTTGTACACT
ATGCACCATGTTCTGTAACGGTTGTTAGATGA

Upstream 100 bases:

>100_bases
ATTCTTGGAGAGAAGGGATACAAATGAGAGATGGATTCCTTTGATAATTATCAAAGGAAATTCACTTTCCCAACATCCAG
GTACATGGTAGAATGCGTGT

Downstream 100 bases:

>100_bases
ATTTGACTTAATTTTGTCAAATCGATGTTAAATTACTTGCACTGAAATGTATCCCATTGGAATCTACGGACTAATCCTAG
AGTAGATTCCTGGTTGATAC

Product: UspA-like DNA binding protein

Products: NA

Alternate protein names: USP MJ0531 [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MEKLIQKLIIPIDGSPSSAKALEFGLAIAKASNAICYVVEVIEDFGPLPGYYDAAPPGKDRVKWISEQRFEKIHPILDET
TVKWNRVVLEGYPAEEICKLAEKEKADLIVIGSRGHGILGRFIMGSVSDRVVHYAPCSVTVVR

Sequences:

>Translated_143_residues
MEKLIQKLIIPIDGSPSSAKALEFGLAIAKASNAICYVVEVIEDFGPLPGYYDAAPPGKDRVKWISEQRFEKIHPILDET
TVKWNRVVLEGYPAEEICKLAEKEKADLIVIGSRGHGILGRFIMGSVSDRVVHYAPCSVTVVR
>Mature_143_residues
MEKLIQKLIIPIDGSPSSAKALEFGLAIAKASNAICYVVEVIEDFGPLPGYYDAAPPGKDRVKWISEQRFEKIHPILDET
TVKWNRVVLEGYPAEEICKLAEKEKADLIVIGSRGHGILGRFIMGSVSDRVVHYAPCSVTVVR

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15780; Mature: 15780

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLIQKLIIPIDGSPSSAKALEFGLAIAKASNAICYVVEVIEDFGPLPGYYDAAPPGKD
CHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH
RVKWISEQRFEKIHPILDETTVKWNRVVLEGYPAEEICKLAEKEKADLIVIGSRGHGILG
HHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCCEEEECCCCCCHHH
RFIMGSVSDRVVHYAPCSVTVVR
HHHHCCCCCCEEEECCCEEEEEC
>Mature Secondary Structure
MEKLIQKLIIPIDGSPSSAKALEFGLAIAKASNAICYVVEVIEDFGPLPGYYDAAPPGKD
CHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH
RVKWISEQRFEKIHPILDETTVKWNRVVLEGYPAEEICKLAEKEKADLIVIGSRGHGILG
HHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCCEEEECCCCCCHHH
RFIMGSVSDRVVHYAPCSVTVVR
HHHHCCCCCCEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]