| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222007
Identifier: 183222007
GI number: 183222007
Start: 2744239
End: 2745507
Strand: Reverse
Name: 183222007
Synonym: LEPBI_I2648
Alternate gene names: NA
Gene position: 2745507-2744239 (Counterclockwise)
Preceding gene: 183222008
Following gene: 183222006
Centisome position: 76.27
GC content: 35.62
Gene sequence:
>1269_bases TTGATACAAATGAAGGTTTCCGAAAAAGAAGAACTCCCCGCTGTTTTACCCCTTGATAAACGATTCACACGCACTTACTA CCAAGAAGATAGTTTTGTTTCGAACATAAGAAGGACCTTACCTCGTATGATTTTTGCGGACATCATGGAAAATGATGTTT TGCCAAAACTGAACGAATCAGATAAAGAATTTCTTTTGTACTATTATACCAAAAGGAAGGATTCAACAGGTAGTTATTAC CAACTCAAAACAATTCCTTCTCGGATACGAAAGTTATCCGCCGATCGAATTTTAACCGAAGCAAATATTGATGAAACTGG AAAAGAATTTCTAAGCCAATTCTATCATTTTGACAAAGAAATTGAACAGTATGTTTTGAATGACCAAGTGACAGAGGCCG ATGAAATCAAAATTTTACAACTTGTAAAACGTAGGGATTATTATGTAGGGAATGTGGAAAAATCAATGATCTCTGCTATC TTTGAAAGATTCCCAGAGATTCCCAAACGTGATACTTTTTTTGCAAATTTATACATTCCTCCCACACACAAATTTTATTC CCCACCCAACCTCAAACATATTTCAGGAATGCAAATTGTCGAAGCATCAAGGCAATTTGGAATTGCATGCAATCATATGT TTGGGAAAGTTCCTTTTGAAGATGTCACCTTTTTATTGTTATATTTGAATTCAGAATTTTTCCAATATGCAAAAATGAAT ATGCCCATTAAACTCAGGGCAAAAGCGAAAGAAGTAAAATTTAGCAAATCGGGATACTGGAACTACTCAAAATTGGCGAT TACGGCCTACCAAGAAAATCAAGAAATCACCAAGATCGAAATGGCGGCAAGCATTCTGCCTTTAAAAGTTTACAAACGTT TAAAAAGCACACAAGAAGAAGTATATGAAATCGATCCAAGATTTCGAATTTTGGACAGATTCAAAAATAACATTTCGATC CGTGAAAATGGGCGTAATATTGTGTCCACGATTGAAAATATCTCAAATTCAGGATTTATGGTGCGCTGCTCAGGGATCCA TCCAGGTGATCTTTCGACCGAACAACAACTCGAATTTTTTATGCATTTTGATATTGTTGGTTTCGTACACGGAACTTGTA TTTTATTATGGGTAAAAGAAGACGATAATAATGAAGATACCTTTTTTGCTGGATTTCGGTTTGAAGAAATATCGGAACTA GACCTGGCAAATGTAAAGGAAGCGATCAATCGGTACGGAAGATTGATCGAAGATAGGGAAATCCAATGA
Upstream 100 bases:
>100_bases TAGATGAATTTGACTTAATTTTGTCAAATCGATGTTAAATTACTTGCACTGAAATGTATCCCATTGGAATCTACGGACTA ATCCTAGAGTAGATTCCTGG
Downstream 100 bases:
>100_bases AAGATAAAAAAGTAGCTTTAGTTACGGGTGGAACATCTGGTTTAGGTAGATCAATCGTATTAGAATATGCGAATGCTGGT TATGTGGTTGGATTCTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MIQMKVSEKEELPAVLPLDKRFTRTYYQEDSFVSNIRRTLPRMIFADIMENDVLPKLNESDKEFLLYYYTKRKDSTGSYY QLKTIPSRIRKLSADRILTEANIDETGKEFLSQFYHFDKEIEQYVLNDQVTEADEIKILQLVKRRDYYVGNVEKSMISAI FERFPEIPKRDTFFANLYIPPTHKFYSPPNLKHISGMQIVEASRQFGIACNHMFGKVPFEDVTFLLLYLNSEFFQYAKMN MPIKLRAKAKEVKFSKSGYWNYSKLAITAYQENQEITKIEMAASILPLKVYKRLKSTQEEVYEIDPRFRILDRFKNNISI RENGRNIVSTIENISNSGFMVRCSGIHPGDLSTEQQLEFFMHFDIVGFVHGTCILLWVKEDDNNEDTFFAGFRFEEISEL DLANVKEAINRYGRLIEDREIQ
Sequences:
>Translated_422_residues MIQMKVSEKEELPAVLPLDKRFTRTYYQEDSFVSNIRRTLPRMIFADIMENDVLPKLNESDKEFLLYYYTKRKDSTGSYY QLKTIPSRIRKLSADRILTEANIDETGKEFLSQFYHFDKEIEQYVLNDQVTEADEIKILQLVKRRDYYVGNVEKSMISAI FERFPEIPKRDTFFANLYIPPTHKFYSPPNLKHISGMQIVEASRQFGIACNHMFGKVPFEDVTFLLLYLNSEFFQYAKMN MPIKLRAKAKEVKFSKSGYWNYSKLAITAYQENQEITKIEMAASILPLKVYKRLKSTQEEVYEIDPRFRILDRFKNNISI RENGRNIVSTIENISNSGFMVRCSGIHPGDLSTEQQLEFFMHFDIVGFVHGTCILLWVKEDDNNEDTFFAGFRFEEISEL DLANVKEAINRYGRLIEDREIQ >Mature_422_residues MIQMKVSEKEELPAVLPLDKRFTRTYYQEDSFVSNIRRTLPRMIFADIMENDVLPKLNESDKEFLLYYYTKRKDSTGSYY QLKTIPSRIRKLSADRILTEANIDETGKEFLSQFYHFDKEIEQYVLNDQVTEADEIKILQLVKRRDYYVGNVEKSMISAI FERFPEIPKRDTFFANLYIPPTHKFYSPPNLKHISGMQIVEASRQFGIACNHMFGKVPFEDVTFLLLYLNSEFFQYAKMN MPIKLRAKAKEVKFSKSGYWNYSKLAITAYQENQEITKIEMAASILPLKVYKRLKSTQEEVYEIDPRFRILDRFKNNISI RENGRNIVSTIENISNSGFMVRCSGIHPGDLSTEQQLEFFMHFDIVGFVHGTCILLWVKEDDNNEDTFFAGFRFEEISEL DLANVKEAINRYGRLIEDREIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49745; Mature: 49745
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQMKVSEKEELPAVLPLDKRFTRTYYQEDSFVSNIRRTLPRMIFADIMENDVLPKLNES CEEECCCCHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DKEFLLYYYTKRKDSTGSYYQLKTIPSRIRKLSADRILTEANIDETGKEFLSQFYHFDKE CCEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH IEQYVLNDQVTEADEIKILQLVKRRDYYVGNVEKSMISAIFERFPEIPKRDTFFANLYIP HHHHHHCCCCCCHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHCCCCCCCCCEEEEEEEC PTHKFYSPPNLKHISGMQIVEASRQFGIACNHMFGKVPFEDVTFLLLYLNSEFFQYAKMN CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC MPIKLRAKAKEVKFSKSGYWNYSKLAITAYQENQEITKIEMAASILPLKVYKRLKSTQEE CCEEEECCHHHEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VYEIDPRFRILDRFKNNISIRENGRNIVSTIENISNSGFMVRCSGIHPGDLSTEQQLEFF HHHCCCHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH MHFDIVGFVHGTCILLWVKEDDNNEDTFFAGFRFEEISELDLANVKEAINRYGRLIEDRE HHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEHHHHHHCHHHHHHHHHHHHHHHCCCCC IQ CC >Mature Secondary Structure MIQMKVSEKEELPAVLPLDKRFTRTYYQEDSFVSNIRRTLPRMIFADIMENDVLPKLNES CEEECCCCHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DKEFLLYYYTKRKDSTGSYYQLKTIPSRIRKLSADRILTEANIDETGKEFLSQFYHFDKE CCEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH IEQYVLNDQVTEADEIKILQLVKRRDYYVGNVEKSMISAIFERFPEIPKRDTFFANLYIP HHHHHHCCCCCCHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHCCCCCCCCCEEEEEEEC PTHKFYSPPNLKHISGMQIVEASRQFGIACNHMFGKVPFEDVTFLLLYLNSEFFQYAKMN CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC MPIKLRAKAKEVKFSKSGYWNYSKLAITAYQENQEITKIEMAASILPLKVYKRLKSTQEE CCEEEECCHHHEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VYEIDPRFRILDRFKNNISIRENGRNIVSTIENISNSGFMVRCSGIHPGDLSTEQQLEFF HHHCCCHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH MHFDIVGFVHGTCILLWVKEDDNNEDTFFAGFRFEEISELDLANVKEAINRYGRLIEDRE HHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEHHHHHHCHHHHHHHHHHHHHHHCCCCC IQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA