Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is pspE [C]

Identifier: 183221988

GI number: 183221988

Start: 2722154

End: 2722603

Strand: Reverse

Name: pspE [C]

Synonym: LEPBI_I2629

Alternate gene names: 183221988

Gene position: 2722603-2722154 (Counterclockwise)

Preceding gene: 183221993

Following gene: 183221981

Centisome position: 75.63

GC content: 39.56

Gene sequence:

>450_bases
ATGGTAAGGGAATGGTCTGTATACCATACCCCCTATGGTATACACTTTTTCTTGACTCCAATCCTTGCAAGGAAAAAATG
GAAAAAAGAGATAAATATGAAAACATTTGTAATTGTGGGAGTGATCATTGGATTCCTCTTTGTTTTCGTGAAAAAGATTC
AATCCAAAGGAGATAAACAAATGGTGCAAGAATGGATCCAAAGTGGAGCGGTAGTTGTGGACGTTCGAACAAAATCAGAA
TTTGCGGAAGGCCATTTCCCAGGTTCGATCAATATTCCGGTCGATGTGTTACCAAATGAGCTTGGTGCAATTAAAAACAA
ACAATCCAAAATTGTGGTTTATTGCCGTTCCGGAGCACGGAGTGAAAGGGCAAAACAAATTTTGACTGCGAGTGGTTACT
CTTCTGTCATCAATGCTGGTGGTTTAGGAGATATGCCTAATTCTCGTTAA

Upstream 100 bases:

>100_bases
ATATAGAGGTTTTATCTGAATTCCATTCATCGAATCTGTATCTACCATGGTATCATTCTCCTAAATTTTTTTCACCATTC
AACATTATTTTTCCTTTCGA

Downstream 100 bases:

>100_bases
GCGAACTTATCTTTTTTAGTTTAAACTACTGCACCCATTGGGCTCTTTGCTTTAAATTGGTGTAGTAGATATAAATCAGC
TAGTTTGGTTTGGGATTCGT

Product: rhodanese-like domain-containing protein

Products: NA

Alternate protein names: Rhodanese Domain Protein; Phage Shock Protein E; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Domain-Containing Protein; Rhodanese-Like Protein; Phage Shock Operon Rhodanese PspE; Metallo-Beta-Lactamase Superfamily Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MVREWSVYHTPYGIHFFLTPILARKKWKKEINMKTFVIVGVIIGFLFVFVKKIQSKGDKQMVQEWIQSGAVVVDVRTKSE
FAEGHFPGSINIPVDVLPNELGAIKNKQSKIVVYCRSGARSERAKQILTASGYSSVINAGGLGDMPNSR

Sequences:

>Translated_149_residues
MVREWSVYHTPYGIHFFLTPILARKKWKKEINMKTFVIVGVIIGFLFVFVKKIQSKGDKQMVQEWIQSGAVVVDVRTKSE
FAEGHFPGSINIPVDVLPNELGAIKNKQSKIVVYCRSGARSERAKQILTASGYSSVINAGGLGDMPNSR
>Mature_149_residues
MVREWSVYHTPYGIHFFLTPILARKKWKKEINMKTFVIVGVIIGFLFVFVKKIQSKGDKQMVQEWIQSGAVVVDVRTKSE
FAEGHFPGSINIPVDVLPNELGAIKNKQSKIVVYCRSGARSERAKQILTASGYSSVINAGGLGDMPNSR

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787567, Length=74, Percent_Identity=39.1891891891892, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16657; Mature: 16657

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVREWSVYHTPYGIHFFLTPILARKKWKKEINMKTFVIVGVIIGFLFVFVKKIQSKGDKQ
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
MVQEWIQSGAVVVDVRTKSEFAEGHFPGSINIPVDVLPNELGAIKNKQSKIVVYCRSGAR
HHHHHHHCCCEEEEEECCHHHHCCCCCCCCCCCCEECCCHHHHHCCCCCEEEEEECCCCC
SERAKQILTASGYSSVINAGGLGDMPNSR
HHHHHHHHHCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVREWSVYHTPYGIHFFLTPILARKKWKKEINMKTFVIVGVIIGFLFVFVKKIQSKGDKQ
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
MVQEWIQSGAVVVDVRTKSEFAEGHFPGSINIPVDVLPNELGAIKNKQSKIVVYCRSGAR
HHHHHHHCCCEEEEEECCHHHHCCCCCCCCCCCCEECCCHHHHHCCCCCEEEEEECCCCC
SERAKQILTASGYSSVINAGGLGDMPNSR
HHHHHHHHHCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA