Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183221687

Identifier: 183221687

GI number: 183221687

Start: 2382209

End: 2382640

Strand: Direct

Name: 183221687

Synonym: LEPBI_I2312

Alternate gene names: NA

Gene position: 2382209-2382640 (Clockwise)

Preceding gene: 183221686

Following gene: 183221690

Centisome position: 66.18

GC content: 42.59

Gene sequence:

>432_bases
ATGTCCGTAAAAGAAATTCTCAAAGACAAAGCCTCCTCCGTTCTTTCCATCGAAGAAGATCGAAATGTATTGGAAGCAAC
GCAAATGATGGTGGGTGCCAAAGTGGGTTCACTCATTGTGACCTTCCAAGGAAAACTAGTCGGAATCTTTACGGAAAGAG
ACCTCATGCGAGTGGTGGCAAAAGACCACAACAAACTCGACCAAATCAAATTGAAAGATGTGATGACCACCCAACTGACG
GTTGCAGGACCGGAAGAAGATGTAGATGATATTTTGAACAATATGATCACAAAACGATTCCGTCATATGCCTGTCCTTGA
TGGTGACAAGATCATTGGACTCATTTCGATCGGTGATGCCGTCAAAACCAAATTAAACAAAACACAAGCGGAGATGAATA
TACTCAGAGAGTATATGTACGGCCCACACTAA

Upstream 100 bases:

>100_bases
TCGGTTCGATCCCGATACGCTCCAAAAACCCGTTTTCTCACTCCTCCCTCTTTAAAAATTTCTTGCCTTCTCTCGTTTTT
TCCGTTACACAAAGAATGCC

Downstream 100 bases:

>100_bases
AACAATCGATTTTCTGTTAAGAGACCAATTGTTTTCTCAAGAACTAGTTTTAAGTTCTTCGTATCTTCTTTGTTATATGC
AATTAGTTTTTTCAGAGCAT

Product: CBS domain-containing protein

Products: NA

Alternate protein names: CBS Domain-Containing Protein; Signal Transduction Protein With CBS Domains; CBS Domain Protein; CBS Domain Containing Protein; Signal Transduction Protein; Signal-Transduction Protein With CBS Domains; XRE Family Transcriptional Regulator; Signal Transduction Protein With Cbs Domains; CBS Domain Containing Membrane Protein; CBS Domain-Containing Signal Transduction Protein; CBS Domain Pair Family; Inosine-5-Monophosphate Dehydrogenase; IMP Dehydrogenase; Transcriptional Regulator; Signal-Transduction Protein With CBS; Transcriptional Regulator XRE Family Protein; CBS Domains; CBS Domain Pair Family Protein; Cystathionine-Beta-Synthase; Inosine-5prime-Monophosphate Dehydrogenase Protein; Inosine-5-Monophosphate Dehydrogenase Related Protein; Signal-Transduction Protein With Cbs Domains

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSVKEILKDKASSVLSIEEDRNVLEATQMMVGAKVGSLIVTFQGKLVGIFTERDLMRVVAKDHNKLDQIKLKDVMTTQLT
VAGPEEDVDDILNNMITKRFRHMPVLDGDKIIGLISIGDAVKTKLNKTQAEMNILREYMYGPH

Sequences:

>Translated_143_residues
MSVKEILKDKASSVLSIEEDRNVLEATQMMVGAKVGSLIVTFQGKLVGIFTERDLMRVVAKDHNKLDQIKLKDVMTTQLT
VAGPEEDVDDILNNMITKRFRHMPVLDGDKIIGLISIGDAVKTKLNKTQAEMNILREYMYGPH
>Mature_142_residues
SVKEILKDKASSVLSIEEDRNVLEATQMMVGAKVGSLIVTFQGKLVGIFTERDLMRVVAKDHNKLDQIKLKDVMTTQLTV
AGPEEDVDDILNNMITKRFRHMPVLDGDKIIGLISIGDAVKTKLNKTQAEMNILREYMYGPH

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16043; Mature: 15912

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKEILKDKASSVLSIEEDRNVLEATQMMVGAKVGSLIVTFQGKLVGIFTERDLMRVVA
CCHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEECHHHHHHHHH
KDHNKLDQIKLKDVMTTQLTVAGPEEDVDDILNNMITKRFRHMPVLDGDKIIGLISIGDA
HCCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHH
VKTKLNKTQAEMNILREYMYGPH
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVKEILKDKASSVLSIEEDRNVLEATQMMVGAKVGSLIVTFQGKLVGIFTERDLMRVVA
CHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEECHHHHHHHHH
KDHNKLDQIKLKDVMTTQLTVAGPEEDVDDILNNMITKRFRHMPVLDGDKIIGLISIGDA
HCCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHH
VKTKLNKTQAEMNILREYMYGPH
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA